Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0592400-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:29511892:29520050:1 gene:Os05g0592400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UV-damaged DNA binding protein large subunit, UV-DDB large subunit, UV-damaged DNA binding protein, UV-damaged DNA binding protein 1 description:UV-damaged DNA binding protein. (Os05t0592400-01);Similar to UV-damaged DNA binding protein. (Os05t0592400-02)
Sequence	ATGAGCGTGTGGAACTACGTCGTGACGGCGCACAAGCCCACCAGCGTCACCCACTCCTGC GTCGGCAACTTCACCGGCCCCAACCAGCTCAACCTCATCGTCGCGAAATGCACCCGTATC GAGATCCACTTGCTTACTCCTCAAGGCCTCCAGCCTATGATTGATGTACCTATCTATGGA AGAATCGCCACACTAGAGCTCTTCCGCCCTCATAATGAGACTCAGGACTTCCTTTTCATT GCGACTGAAAGATACAAATTCTGTGTTCTGCAGTGGGATGGAGAAAAATCGGAGCTTCTC ACTAGAGCGATGGGAGATGTTTCTGATCGCATTGGTCGCCCTACGGACAATGGACAGATT GGGATCATCGACCCTGACTGTAGACTTATTGGTCTTCACCTCTACGATGGATTATTTAAG GTTATACCGTTTGATAACAAAGGGCAGCTGAAGGAAGCTTTCAATATCAGGCTTGAAGAA CTTCAAGTATTGGACATCAAGTTCCTGTATGGCTGTGTTAAACCTACTATAGTTGTCCTC TACCAGGATAACAAAGATGCAAGACATGTTAAGACATATGAAGTTGCATTGAAGGACAAA GACTTTGTTGAGGGTCCTTGGTCGCAGAACAATTTAGACAATGGTGCTGGTCTGTTAATA CCTGTACCAGCTCCTCTTGGTGGTGTCATAATTATTGGTGAGGAGACAATAGTTTACTGC AATGCCAACTCTACATTTAGAGCTATACCAATCAAACAGTCAATCATAAGAGCTTACGGA CGGGTTGACCCAGACGGTTCGCGCTATTTACTTGGTGATAATGCAGGCATATTGCATTTA CTTGTCCTTACCCATGAACGAGAGAGGGTAACCGGTCTGAAAATCGAGTACTTGGGAGAG ACTTCAATTGCATCATCAATATCATATCTCGATAATGGTGTTGTCTACGTTGGTTCTCGA TTTGGTGATTCACAGCTTGTAAAACTAAATCTCCAAGCTGACCCAAATGGTTCATATGTT GAAGTTCTTGAGCGATATGTGAACCTTGGACCCATCGTGGACTTCTGTGTGGTTGACCTT GACAGGCAGGGTCAGGGTCAGGTTGTCACTTGTTCAGGAGCATTTAAAGATGGTTCCCTT CGGGTGGTTCGGAATGGGATAGGTATCAATGAGCAGGCTTCAGTAGAACTACAAGGGATC AAGGGTTTATGGTCGTTGAAATCTTCCTTCAATGATCCGTATGACATGTACCTAGTTGTG AGCTTTATAAGCGAGACAAGATTCTTGGCTATGAACATGGAAGATGAGTTAGAAGAAACT GAGATAGAAGGCTTTGATGCGCAGACTCAGACTTTGTTTTGTCAAAATGCCATCAATGAT CTGCTTATACAGGTTACTGCTAATTCTGTTCGTCTGGTTAGTTGTACCTCTCGGGAGCTA GTGGATCAATGGAATGCACCAGAAGGATTTTCAGTCAATGTTGCATCAGCTAATGCCAGT CAGGTTCTGCTGGCAACAGGTGGTGGCCATCTTGTTTACCTCGAAATTAAGGATTCTAAG CTGGTTGAAGTGAAACATATACAGTTAGAACATGAGATCTCCTGTGTTGATTTGAATCCA ATTGGGGAGAATCCACAGTATAGCTCTCTGGCTGCTGTTGGGATGTGGACTGATATAAGT GTTAGAATACTTTCACTTCCAGACCTTGAATTAATCAGGAAGGAGAACTTAGGTGGAGAA ATTGTTCCTCGGTCTGTTCTGCTTTGTACCTTGGAAGGGGTTTCATATTTGCTCTGTGCT CTTGGAGATGGTCATCTGTTCAGTTTTCTGTTGAATGCAAGTACGGGTGAATTAACTGAT AGAAAGAAGGTTTCTCTTGGTACCCAACCGATAAGCCTTCGTACATTCTCATCAAAGGGT ACAACCCACGTGTTTGCTTCATCGGATAGACCGACTGTTATTTATAGCAGCAACAAGAAG TTGCTGTATAGCAATGTCAATTTGAAGGAAGTCAACCATATGTGTCCTTTTAATACAGCT GCTATTCCTGACAGCCTTGCAATTGCTAAAGAAGGTGAACTCTCAATTGGAACCATCGAT GACATCCAGAAGCTTCATATCCGTACAATCCCCTTGAATGAACAAGCACGTCGCATTTGC CATCAGGAACAGTCCAGGACACTAGCGTTCTGCAGCTTCAAGCACAACCAGACTAGTATA GAGGAAAGCGAGACACATTTTGTTCGTCTTTTGGATCATCAAACTTTTGAGTTCCTGTCA ATTTATCAGCTTGATCAATATGAGCATGGCTGCTCCATCATTAGCTGCTCATTCTCAGAT GATAATAATGTTTATTATTGTGTGGGAACAGCATATGTTTTACCAGAGGAAAATGAACCA TCAAAGGGCCGGATCCTTGTATTTGCAGTTGAAGATGGCAGACTGCAATTAATTGTAGAG AAAGAAACTAAAGGAGCTGTCTATTCGCTGAATGCATTCAACGGAAAATTGTTGGCAGCT ATCAACCAGAAGATTCAACTATATAAGTGGATGCTACGGGAGGACGGTTCACATGAGCTG CAGTCTGAGTGTGGGCATCATGGGCACATATTGGCTTTGTACACTCAGACTCGTGGCGAT TTCATTGTAGTTGGAGACTTGATGAAATCAATATCCTTGCTCGTGTACAAGCACGAGGAA AGTGCGATTGAAGAGCTTGCTAGGGATTACAATGCAAACTGGATGAGTGCAGTTGAGATG CTTGATGACGAGATCTATATTGGAGCAGAGAATAACTACAACATTTTCACTGTGCGGAAG AACAGTGATGCAGCGACAGATGAAGAGAGGGGCAGGCTGGAGGTTGTTGGAGAGTACCAT CTTGGAGAGTTTGTGAATAGACTCCGGCATGGTTCGCTGGTAATGCGGCTTCCGGACTCA GAGATGGGCCAGATCCCGACGGTTATCTTTGGCACCATCAACGGGGTTATTGGGATTATT GCTTCGCTTCCACATGAGCAGTATGTATTTCTTGAGAAGCTCCAGTCGACTCTGGTGAAG TTCATAAAGGGCGTGGGGAACCTGAGCCATGAGCAATGGCGGTCGTTCCACAACGACAAG AAGACGTCGGAGGCCCGCAATTTCCTGGATGGTGACCTGATCGAGTCATTCCTTGATCTA AGCAGAAACAAGATGGAGGAGGTGGCCAAGGGTATGGGGGTCCCCGTTGAGGAGCTATCC AAGAGGGTGGAGGAGCTGACTAGATTGCACTAG

Peptide Sequence

PEP ID	Os05t0592400-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:29511892:29520050:1 gene:Os05g0592400 transcript:Os05t0592400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UV-damaged DNA binding protein large subunit, UV-DDB large subunit, UV-damaged DNA binding protein, UV-damaged DNA binding protein 1 description:UV-damaged DNA binding protein. (Os05t0592400-01);Similar to UV-damaged DNA binding protein. (Os05t0592400-02)
Sequence	MSVWNYVVTAHKPTSVTHSCVGNFTGPNQLNLIVAKCTRIEIHLLTPQGLQPMIDVPIYG RIATLELFRPHNETQDFLFIATERYKFCVLQWDGEKSELLTRAMGDVSDRIGRPTDNGQI GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCVKPTIVVL YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGAGLLIPVPAPLGGVIIIGEETIVYC NANSTFRAIPIKQSIIRAYGRVDPDGSRYLLGDNAGILHLLVLTHERERVTGLKIEYLGE TSIASSISYLDNGVVYVGSRFGDSQLVKLNLQADPNGSYVEVLERYVNLGPIVDFCVVDL DRQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVV SFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSREL VDQWNAPEGFSVNVASANASQVLLATGGGHLVYLEIKDSKLVEVKHIQLEHEISCVDLNP IGENPQYSSLAAVGMWTDISVRILSLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCA LGDGHLFSFLLNASTGELTDRKKVSLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKK LLYSNVNLKEVNHMCPFNTAAIPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRIC HQEQSRTLAFCSFKHNQTSIEESETHFVRLLDHQTFEFLSIYQLDQYEHGCSIISCSFSD DNNVYYCVGTAYVLPEENEPSKGRILVFAVEDGRLQLIVEKETKGAVYSLNAFNGKLLAA INQKIQLYKWMLREDGSHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEE SAIEELARDYNANWMSAVEMLDDEIYIGAENNYNIFTVRKNSDAATDEERGRLEVVGEYH LGEFVNRLRHGSLVMRLPDSEMGQIPTVIFGTINGVIGIIASLPHEQYVFLEKLQSTLVK FIKGVGNLSHEQWRSFHNDKKTSEARNFLDGDLIESFLDLSRNKMEEVAKGMGVPVEELS KRVEELTRLH

Transcript Sequence

Transcript ID	Os05t0592400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:29511892:29520050:1 gene:Os05g0592400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UV-damaged DNA binding protein large subunit, UV-DDB large subunit, UV-damaged DNA binding protein, UV-damaged DNA binding protein 1 description:UV-damaged DNA binding protein. (Os05t0592400-01);Similar to UV-damaged DNA binding protein. (Os05t0592400-02)
Sequence	GCGCTCTAGACTGTGCAGGAGAGACCACCCCCTCCCTCCTTCTAGAAGACTAGAACCCTC GCCATCCTCCCCTTCCCCCACCCTAGCGTCGGCGGCGGCGGCGGTGGCGGCGGAGATGAG CGTGTGGAACTACGTCGTGACGGCGCACAAGCCCACCAGCGTCACCCACTCCTGCGTCGG CAACTTCACCGGCCCCAACCAGCTCAACCTCATCGTCGCGAAATGCACCCGTATCGAGAT CCACTTGCTTACTCCTCAAGGCCTCCAGCCTATGATTGATGTACCTATCTATGGAAGAAT CGCCACACTAGAGCTCTTCCGCCCTCATAATGAGACTCAGGACTTCCTTTTCATTGCGAC TGAAAGATACAAATTCTGTGTTCTGCAGTGGGATGGAGAAAAATCGGAGCTTCTCACTAG AGCGATGGGAGATGTTTCTGATCGCATTGGTCGCCCTACGGACAATGGACAGATTGGGAT CATCGACCCTGACTGTAGACTTATTGGTCTTCACCTCTACGATGGATTATTTAAGGTTAT ACCGTTTGATAACAAAGGGCAGCTGAAGGAAGCTTTCAATATCAGGCTTGAAGAACTTCA AGTATTGGACATCAAGTTCCTGTATGGCTGTGTTAAACCTACTATAGTTGTCCTCTACCA GGATAACAAAGATGCAAGACATGTTAAGACATATGAAGTTGCATTGAAGGACAAAGACTT TGTTGAGGGTCCTTGGTCGCAGAACAATTTAGACAATGGTGCTGGTCTGTTAATACCTGT ACCAGCTCCTCTTGGTGGTGTCATAATTATTGGTGAGGAGACAATAGTTTACTGCAATGC CAACTCTACATTTAGAGCTATACCAATCAAACAGTCAATCATAAGAGCTTACGGACGGGT TGACCCAGACGGTTCGCGCTATTTACTTGGTGATAATGCAGGCATATTGCATTTACTTGT CCTTACCCATGAACGAGAGAGGGTAACCGGTCTGAAAATCGAGTACTTGGGAGAGACTTC AATTGCATCATCAATATCATATCTCGATAATGGTGTTGTCTACGTTGGTTCTCGATTTGG TGATTCACAGCTTGTAAAACTAAATCTCCAAGCTGACCCAAATGGTTCATATGTTGAAGT TCTTGAGCGATATGTGAACCTTGGACCCATCGTGGACTTCTGTGTGGTTGACCTTGACAG GCAGGGTCAGGGTCAGGTTGTCACTTGTTCAGGAGCATTTAAAGATGGTTCCCTTCGGGT GGTTCGGAATGGGATAGGTATCAATGAGCAGGCTTCAGTAGAACTACAAGGGATCAAGGG TTTATGGTCGTTGAAATCTTCCTTCAATGATCCGTATGACATGTACCTAGTTGTGAGCTT TATAAGCGAGACAAGATTCTTGGCTATGAACATGGAAGATGAGTTAGAAGAAACTGAGAT AGAAGGCTTTGATGCGCAGACTCAGACTTTGTTTTGTCAAAATGCCATCAATGATCTGCT TATACAGGTTACTGCTAATTCTGTTCGTCTGGTTAGTTGTACCTCTCGGGAGCTAGTGGA TCAATGGAATGCACCAGAAGGATTTTCAGTCAATGTTGCATCAGCTAATGCCAGTCAGGT TCTGCTGGCAACAGGTGGTGGCCATCTTGTTTACCTCGAAATTAAGGATTCTAAGCTGGT TGAAGTGAAACATATACAGTTAGAACATGAGATCTCCTGTGTTGATTTGAATCCAATTGG GGAGAATCCACAGTATAGCTCTCTGGCTGCTGTTGGGATGTGGACTGATATAAGTGTTAG AATACTTTCACTTCCAGACCTTGAATTAATCAGGAAGGAGAACTTAGGTGGAGAAATTGT TCCTCGGTCTGTTCTGCTTTGTACCTTGGAAGGGGTTTCATATTTGCTCTGTGCTCTTGG AGATGGTCATCTGTTCAGTTTTCTGTTGAATGCAAGTACGGGTGAATTAACTGATAGAAA GAAGGTTTCTCTTGGTACCCAACCGATAAGCCTTCGTACATTCTCATCAAAGGGTACAAC CCACGTGTTTGCTTCATCGGATAGACCGACTGTTATTTATAGCAGCAACAAGAAGTTGCT GTATAGCAATGTCAATTTGAAGGAAGTCAACCATATGTGTCCTTTTAATACAGCTGCTAT TCCTGACAGCCTTGCAATTGCTAAAGAAGGTGAACTCTCAATTGGAACCATCGATGACAT CCAGAAGCTTCATATCCGTACAATCCCCTTGAATGAACAAGCACGTCGCATTTGCCATCA GGAACAGTCCAGGACACTAGCGTTCTGCAGCTTCAAGCACAACCAGACTAGTATAGAGGA AAGCGAGACACATTTTGTTCGTCTTTTGGATCATCAAACTTTTGAGTTCCTGTCAATTTA TCAGCTTGATCAATATGAGCATGGCTGCTCCATCATTAGCTGCTCATTCTCAGATGATAA TAATGTTTATTATTGTGTGGGAACAGCATATGTTTTACCAGAGGAAAATGAACCATCAAA GGGCCGGATCCTTGTATTTGCAGTTGAAGATGGCAGACTGCAATTAATTGTAGAGAAAGA AACTAAAGGAGCTGTCTATTCGCTGAATGCATTCAACGGAAAATTGTTGGCAGCTATCAA CCAGAAGATTCAACTATATAAGTGGATGCTACGGGAGGACGGTTCACATGAGCTGCAGTC TGAGTGTGGGCATCATGGGCACATATTGGCTTTGTACACTCAGACTCGTGGCGATTTCAT TGTAGTTGGAGACTTGATGAAATCAATATCCTTGCTCGTGTACAAGCACGAGGAAAGTGC GATTGAAGAGCTTGCTAGGGATTACAATGCAAACTGGATGAGTGCAGTTGAGATGCTTGA TGACGAGATCTATATTGGAGCAGAGAATAACTACAACATTTTCACTGTGCGGAAGAACAG TGATGCAGCGACAGATGAAGAGAGGGGCAGGCTGGAGGTTGTTGGAGAGTACCATCTTGG AGAGTTTGTGAATAGACTCCGGCATGGTTCGCTGGTAATGCGGCTTCCGGACTCAGAGAT GGGCCAGATCCCGACGGTTATCTTTGGCACCATCAACGGGGTTATTGGGATTATTGCTTC GCTTCCACATGAGCAGTATGTATTTCTTGAGAAGCTCCAGTCGACTCTGGTGAAGTTCAT AAAGGGCGTGGGGAACCTGAGCCATGAGCAATGGCGGTCGTTCCACAACGACAAGAAGAC GTCGGAGGCCCGCAATTTCCTGGATGGTGACCTGATCGAGTCATTCCTTGATCTAAGCAG AAACAAGATGGAGGAGGTGGCCAAGGGTATGGGGGTCCCCGTTGAGGAGCTATCCAAGAG GGTGGAGGAGCTGACTAGATTGCACTAGGTCTCGATAATGATGATATAATTAATACGTAG AAGATGTTTGCTGGAACTTATTTCTGAAATGTATATTTTTTTTTCTACTCCAGTTTATTA AGCATGTGTTGGTGGGTTGAATGTTGATGCCGCTGGTGGCACAGGAAGAAGCATTCCTGT TAAGAAGAGTTACTAAGTTACCCATGTGGTTCGGTTGTAGATTTTACTCTGTTTTGTTGG TTGGATGGTCCAGTAATTAACGTTTGAGCTGCCAGTTTTAAGATGTACTCCTAGTAGTAT TAGAAATTGTTTTCCTCTGTTGGTTGTGATTGTTGTGGTGGGCACGCTGTTTGAACACTT TGTACAAGGAGTTGTAAAGCAGGTCCCTCGGCTTGATTCTTGATGAGTATAGTAGTATTT TGATTGGTTG