Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0592000-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:29494549:29495754:1 gene:Os05g0592000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0592000-00)
Sequence

ATGGCGAGCAACAAGCAAGGAGGAGGCAAGCAGCAGGCAGCTGCTGCTAGTCCTGGTCCT
GATCAGAAAGATGAAGAGCTTGACCCCAAGTTCGAGTGGCTCGACAATGCCAACAACTTC
CTCCTCCGCCTCTACCTCACTGGTTTCAAGAAGGAAGATTTCAGGGTGCAAGTAGACGGC
ACGGGCAAGCTGACCGTCCGGGGGCAGCGCCCCGCCGCCGGCAGCAAGCACAACACCCGC
TTCCACAAGGTCTTCCAGCTGCCCTCCAACGCTAACATCGACGACATCACCGGCCGCTTC
GAGGCCAGCGTCCTCACCATCACCGTCCCCAAGCGCCCCGCCCCGACCTCCTCCGCGCCA
GCTCCCACCTCCGTACAGGAGATCAAGCAGAAAGCGCCTACCGCCAAGCAGGAGCCCCAA
CCCCAATTCGACGAGGCACCCAACAAGAAGAAACAACAACAGGAGGAGGAGGAAGAAGCA
GCCAAGAAGAAGCAGCAGCAGCTGCAGGAAGAGGAAGAAGCAACCAAGAAGAAGCAACAG
GAGGAGGAGGAAGAAGCAGCCGCCAAGAAGACGAAGAAACTGCAGGAGGAAGAGGCGATT
GCCAAGCACAAGCCTGCAACGACGACCGAGAGGAAGCAGGCAGAGCCTACTACTGCTGCA
CCGCTACCGGGGCATGTCGTCGATCGGGAGAGCCTGGCGGAGAAGGTGAAGCGGCGCGCC
GAGGAAGAGTGCGCCAAGGCGGCGGCTGCGGCGGAGGAGAAGACGGCGACGGCGTTGAGC
AGGTGGAGAGAGCGCGTGGCGGGGGAGCTGGAGCATCTGGGAGACATGAGGTGGGCGGAG
GGCGTGGTGGAGACGGCGAGGAGGAACAAGGATGTCATCGCCACCGCCGTCGCCGCCTTC
TCCCTCGGCTTCTTCGTCTCCCACAAGTTCTTCTGCAGGAGGTGA

Peptide Sequence

PEP ID

Os05t0592000-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:29494549:29495754:1 gene:Os05g0592000 transcript:Os05t0592000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0592000-00)
Sequence

MASNKQGGGKQQAAAASPGPDQKDEELDPKFEWLDNANNFLLRLYLTGFKKEDFRVQVDG
TGKLTVRGQRPAAGSKHNTRFHKVFQLPSNANIDDITGRFEASVLTITVPKRPAPTSSAP
APTSVQEIKQKAPTAKQEPQPQFDEAPNKKKQQQEEEEEAAKKKQQQLQEEEEATKKKQQ
EEEEEAAAKKTKKLQEEEAIAKHKPATTTERKQAEPTTAAPLPGHVVDRESLAEKVKRRA
EEECAKAAAAAEEKTATALSRWRERVAGELEHLGDMRWAEGVVETARRNKDVIATAVAAF
SLGFFVSHKFFCRR

Transcript Sequence

Transcript ID

Os05t0592000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:29494549:29495754:1 gene:Os05g0592000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0592000-00)
Sequence

GCAGCAGCAAATAAACCGACGAGCTGTACGTAGCTTAGCTTCCATCGCGCGGGTGGTAGA
TTGATGGCGAGCAACAAGCAAGGAGGAGGCAAGCAGCAGGCAGCTGCTGCTAGTCCTGGT
CCTGATCAGAAAGATGAAGAGCTTGACCCCAAGTTCGAGTGGCTCGACAATGCCAACAAC
TTCCTCCTCCGCCTCTACCTCACTGGTTTCAAGAAGGAAGATTTCAGGGTGCAAGTAGAC
GGCACGGGCAAGCTGACCGTCCGGGGGCAGCGCCCCGCCGCCGGCAGCAAGCACAACACC
CGCTTCCACAAGGTCTTCCAGCTGCCCTCCAACGCTAACATCGACGACATCACCGGCCGC
TTCGAGGCCAGCGTCCTCACCATCACCGTCCCCAAGCGCCCCGCCCCGACCTCCTCCGCG
CCAGCTCCCACCTCCGTACAGGAGATCAAGCAGAAAGCGCCTACCGCCAAGCAGGAGCCC
CAACCCCAATTCGACGAGGCACCCAACAAGAAGAAACAACAACAGGAGGAGGAGGAAGAA
GCAGCCAAGAAGAAGCAGCAGCAGCTGCAGGAAGAGGAAGAAGCAACCAAGAAGAAGCAA
CAGGAGGAGGAGGAAGAAGCAGCCGCCAAGAAGACGAAGAAACTGCAGGAGGAAGAGGCG
ATTGCCAAGCACAAGCCTGCAACGACGACCGAGAGGAAGCAGGCAGAGCCTACTACTGCT
GCACCGCTACCGGGGCATGTCGTCGATCGGGAGAGCCTGGCGGAGAAGGTGAAGCGGCGC
GCCGAGGAAGAGTGCGCCAAGGCGGCGGCTGCGGCGGAGGAGAAGACGGCGACGGCGTTG
AGCAGGTGGAGAGAGCGCGTGGCGGGGGAGCTGGAGCATCTGGGAGACATGAGGTGGGCG
GAGGGCGTGGTGGAGACGGCGAGGAGGAACAAGGATGTCATCGCCACCGCCGTCGCCGCC
TTCTCCCTCGGCTTCTTCGTCTCCCACAAGTTCTTCTGCAGGAGGTGATCCAATCCAATC
CATCCATCCATCACACCGTATCTCCATGCCCATGTAAT