Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0590100-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:29382087:29384471:1 gene:Os05g0590100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin domain containing protein. (Os05t0590100-01)
Sequence	ATGACGACGACGGCCGCCGGCGGAGCCACCCTGTGCGCGGCGAGGGAGGAGCAGGAGCTC CTGGCCACCCGCCTGAATGTGAACGGCATCCGGCCGCCGCATTGCGCCGCGGAATCTATC CTCATCTACCTCACCGCGCCGGGGCTCTCCATGATGCCCATGCGGGTGATGGCCTCCGAC TCCATCGCCTCCGTCAAGCTCCGCGTCCAGACCTCCAAGGGCTTCGTCGTCCGCAAGCAG AAGCTCGTCTTCGATGGCCGGGAGCTCGCCCGGAACGACAGCCGCATCATGGACTACGGC GTCTCCCACGGCAACGTCCTCCACCTCGTCATCCGCATCTCCGACCTCCGCCTCATCACC GTCCAGACCGTCCACGGCAACAAGTTCAGGTTCCGCGTCGAGCCCGGCCGCACCGTCGGC TACGTCAAGCAGCAGATCGCCAAGAACTCCACCCACGACGACGACCACCACAGCCTCGTC CTCCAGGGCGAGGTGCTCGACGACGCCCACCTCATCCACGACGTCTGCAGGACCGACGGC GCCGTCATCCACCTGCTCGTCCACCGCTCCGCCAAGCTCGCCGCCAGGCCCGTCGACCGG GACTTCGAGGTCTCCATCGTCGCGCGCAACCGCAACGCCGCCGCCGACGCTGCTCAACCG ACGTTGCACCTGCAGAGGGACTTCGCCATCGAGCCGGTCATCGTCAACCCCAAGGCCGCG CTTCCGCCAGTGATCGAGAACCTGGTGGGCGCCGTGCTGGCCGGGATGGAGAAGGGGAAC GCCCCGATCATGTCGTCGGAGGGCACCGGGGGGGCGTATTTCATGCAGGACGCGTCGGGG CAGGAGCACGTCGCCGTGTTCAAGCCGGTGGACGAGGAGCCCATGGCGGCCAACAACCCA CGCGGCCTCCCACCCTCGCCCACCGGCGAGGGGCTCAAGAAGGGGACACGCGTCGGCGAG GGCGCCATCAGAGAGGTCGCCGCCTACATCCTCGACCACCCTCCCGGTGGCCGCCGTTCG TTCGCAGGACATCATGGCTCCGCCACCGTGGGCTTCGCCGGTGTCGCGCCAACCGCGCTG GTCCGTTGCATGCACAGGAGCTTCAAGCAACCTGCAGCTTCCGAACAAGGTCCTCCATTG TTCAAGGTGGGGTCATTGCAAGCGTTCGTGAAGAACAGCGGCAGCTGCGAGGACATGGGA CCTCGTGCGTTCCCGGTGCACGAAGTTCACAAGATCTGCGTGCTGGACATCAGGCTGGCC AACGCCGACAGGCACGCCGGCAACATCCTCACCTGCAGAGACGAACAAGGCCATGGCCTC ACCCTGGTTCCGATCGACCATGGATACTGTCTTCCTGAGAGTTTTGAGGATTGCACATTC GAGTGGCTCTACTGGCCGCAGTGTCGGGAGCCATTCAGCGAGGAGACGGTGGAGTACATA AGGTCACTGGACGCGGAGGAGGACATCGCCATTCTGAGGTTCCATGGGTGGGAGATGCCA GCCAAGTGCGAGCGCGTCCTGCGCGTCACCACCATGCTGCTCAAGAAGGGCGTCGACTCG GGCCTCGCCGCGTTCGACATGGGGAGCATCTTGTGCAGGGAGACGCTCACCAAGGAGTCT GTCATCGAGGAGATCATCCGTGAGGTTGAAGACGATGTTGGTGATGAAGCTGCCTTCCTG CAGTCTGTCTCTCAATCCATGGATCGCCGTCTGGGTGAATTATCCAAGAAAAAAAAAAGT AATGTAAGTATACAAGATTAA

Peptide Sequence

PEP ID	Os05t0590100-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:29382087:29384471:1 gene:Os05g0590100 transcript:Os05t0590100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin domain containing protein. (Os05t0590100-01)
Sequence	MTTTAAGGATLCAAREEQELLATRLNVNGIRPPHCAAESILIYLTAPGLSMMPMRVMASD SIASVKLRVQTSKGFVVRKQKLVFDGRELARNDSRIMDYGVSHGNVLHLVIRISDLRLIT VQTVHGNKFRFRVEPGRTVGYVKQQIAKNSTHDDDHHSLVLQGEVLDDAHLIHDVCRTDG AVIHLLVHRSAKLAARPVDRDFEVSIVARNRNAAADAAQPTLHLQRDFAIEPVIVNPKAA LPPVIENLVGAVLAGMEKGNAPIMSSEGTGGAYFMQDASGQEHVAVFKPVDEEPMAANNP RGLPPSPTGEGLKKGTRVGEGAIREVAAYILDHPPGGRRSFAGHHGSATVGFAGVAPTAL VRCMHRSFKQPAASEQGPPLFKVGSLQAFVKNSGSCEDMGPRAFPVHEVHKICVLDIRLA NADRHAGNILTCRDEQGHGLTLVPIDHGYCLPESFEDCTFEWLYWPQCREPFSEETVEYI RSLDAEEDIAILRFHGWEMPAKCERVLRVTTMLLKKGVDSGLAAFDMGSILCRETLTKES VIEEIIREVEDDVGDEAAFLQSVSQSMDRRLGELSKKKKSNVSIQD

Transcript Sequence

Transcript ID	Os05t0590100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:29382087:29384471:1 gene:Os05g0590100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin domain containing protein. (Os05t0590100-01)
Sequence	GACAAACCGCCAGAGGCACCTAATTTTGGCACTGGTCGTCCCCAGCAGAGCAGATGAACA AGAGAGGTGCCTCGCAATTCCCAAAACGAAACGAAACGAAAGGAAACAAAGCGATCCTTC TTGCGCTCCGGCGCCGCCGTCTCCCCCTCGCGCGGTTGCCTGAGCCAAGAACAGGATCGG AGGCCAGGCCCCATGCATGCATGTTAATTAGTCTGTCACTGATCACTTCATCCCATTAGC CATTAGCTGTTTCTCATCCAGACGGACGCGCCATCCAACACACATCGATCGATCGGAGGT TGATTGGCCGGCCATGACGACGACGGCCGCCGGCGGAGCCACCCTGTGCGCGGCGAGGGA GGAGCAGGAGCTCCTGGCCACCCGCCTGAATGTGAACGGCATCCGGCCGCCGCATTGCGC CGCGGAATCTATCCTCATCTACCTCACCGCGCCGGGGCTCTCCATGATGCCCATGCGGGT GATGGCCTCCGACTCCATCGCCTCCGTCAAGCTCCGCGTCCAGACCTCCAAGGGCTTCGT CGTCCGCAAGCAGAAGCTCGTCTTCGATGGCCGGGAGCTCGCCCGGAACGACAGCCGCAT CATGGACTACGGCGTCTCCCACGGCAACGTCCTCCACCTCGTCATCCGCATCTCCGACCT CCGCCTCATCACCGTCCAGACCGTCCACGGCAACAAGTTCAGGTTCCGCGTCGAGCCCGG CCGCACCGTCGGCTACGTCAAGCAGCAGATCGCCAAGAACTCCACCCACGACGACGACCA CCACAGCCTCGTCCTCCAGGGCGAGGTGCTCGACGACGCCCACCTCATCCACGACGTCTG CAGGACCGACGGCGCCGTCATCCACCTGCTCGTCCACCGCTCCGCCAAGCTCGCCGCCAG GCCCGTCGACCGGGACTTCGAGGTCTCCATCGTCGCGCGCAACCGCAACGCCGCCGCCGA CGCTGCTCAACCGACGTTGCACCTGCAGAGGGACTTCGCCATCGAGCCGGTCATCGTCAA CCCCAAGGCCGCGCTTCCGCCAGTGATCGAGAACCTGGTGGGCGCCGTGCTGGCCGGGAT GGAGAAGGGGAACGCCCCGATCATGTCGTCGGAGGGCACCGGGGGGGCGTATTTCATGCA GGACGCGTCGGGGCAGGAGCACGTCGCCGTGTTCAAGCCGGTGGACGAGGAGCCCATGGC GGCCAACAACCCACGCGGCCTCCCACCCTCGCCCACCGGCGAGGGGCTCAAGAAGGGGAC ACGCGTCGGCGAGGGCGCCATCAGAGAGGTCGCCGCCTACATCCTCGACCACCCTCCCGG TGGCCGCCGTTCGTTCGCAGGACATCATGGCTCCGCCACCGTGGGCTTCGCCGGTGTCGC GCCAACCGCGCTGGTCCGTTGCATGCACAGGAGCTTCAAGCAACCTGCAGCTTCCGAACA AGGTCCTCCATTGTTCAAGGTGGGGTCATTGCAAGCGTTCGTGAAGAACAGCGGCAGCTG CGAGGACATGGGACCTCGTGCGTTCCCGGTGCACGAAGTTCACAAGATCTGCGTGCTGGA CATCAGGCTGGCCAACGCCGACAGGCACGCCGGCAACATCCTCACCTGCAGAGACGAACA AGGCCATGGCCTCACCCTGGTTCCGATCGACCATGGATACTGTCTTCCTGAGAGTTTTGA GGATTGCACATTCGAGTGGCTCTACTGGCCGCAGTGTCGGGAGCCATTCAGCGAGGAGAC GGTGGAGTACATAAGGTCACTGGACGCGGAGGAGGACATCGCCATTCTGAGGTTCCATGG GTGGGAGATGCCAGCCAAGTGCGAGCGCGTCCTGCGCGTCACCACCATGCTGCTCAAGAA GGGCGTCGACTCGGGCCTCGCCGCGTTCGACATGGGGAGCATCTTGTGCAGGGAGACGCT CACCAAGGAGTCTGTCATCGAGGAGATCATCCGTGAGGTTGAAGACGATGTTGGTGATGA AGCTGCCTTCCTGCAGTCTGTCTCTCAATCCATGGATCGCCGTCTGGGTGAATTATCCAA GAAAAAAAAAAGTAATGTAAGTATACAAGATTAACTGGTTGCCTCCCTCTACTCATATCA TAGATAAATAACGTCAATAAAAAGGGCCAAGCTAAACTAATTAAAAGGGACAGAGGAAAA GGTTGTACTAGTGTACTTGAGTTATAAACTTTTTGTGCAGCTGACAATTGAGTGTACATG TAATCAGCAGTGGATTTAAAGGCCTTGAGGGCGTGTACCCTTTTTTTTCTTTCATGTGGT TTAATTATGTGGAAAATTTGAC