Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0590000-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:29379785:29381423:-1 gene:Os05g0590000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os05t0590000-01);Peptidase A1 domain containing protein. (Os05t0590000-02)
Sequence	ATGCTCCCCTCAACGGCAATGGCGTTCCATGTCTTCCTCATCGCTGCGCTGCTGTTGCTG CCTCTCCCCGCCGCCTTCTCCAAGGCCGTGCGCACCCAATCCCTTCTCGCCAACCCGCTC TCCCCGGATCCTATCACTCAGGAGCAGCAGCTCAGCCTCGCCGCGCCCCGCACCAACGCC TCCACGCTCCACTTCCGCCTCGCCCACCGCGAGCACTTCGCGCTCAACGCCACCGCCTCC GATCTGCTCGCGCACCTCCTCGCCCGGGACGCCGCGCGCGCCGCCGCCCTGCTTGCTGCA CCCAACAATGCCACGCGCCCGCGCCGCCGCGGCGGCTTCGCGGCGCCCCTGCTGTCCGGC CTCCCGCAGGGGAGCGGGGAGTACTTCGCCCAGGTCGGGGTCGGCACGCCCGCCACCACC GCGCTCATGGTGCTCGACACCGGCAGCGACGTCGTCTGGCTCCAGTGCGCGCCCTGCCGC CACTGCTACGCGCAGTCCGGCAGGGTCTTCGACCCGCGCCGCTCCCGCTCCTACGCCGCG GTGGACTGCGTCGCGCCCATCTGCCGCCGCCTCGATTCCGCCGGCTGCGACAGGCGCCGC AACTCCTGCCTCTACCAGGTAGCCTACGGCGACGGCTCTGTCACCGCCGGGGACTTCGCC TCCGAGACGCTCACCTTCGCGCGGGGCGCCCGCGTGCAGCGGGTGGCCATCGGGTGCGGC CACGACAACGAGGGGCTCTTCATCGCCGCGTCGGGACTCCTCGGCCTCGGCCGTGGCAGG CTGTCGTTCCCCTCCCAGATCGCCCGCAGCTTCGGCCGGAGCTTCTCCTACTGCCTCGTG GACCGGACCTCGTCGGTGAGGCCCTCCTCCACCCGCTCCTCCACCGTAACGTTCGGCGCC GGCGCGGTGGCGGCAGCGGCGGGCGCGTCCTTCACGCCGATGGGGAGGAACCCCAGGATG GCGACGTTCTACTACGTGCACCTCCTGGGCTTCAGCGTGGGCGGCGCGCGCGTGAAGGGC GTGTCCCAGTCCGACCTCCGGCTGAACCCGACCACCGGGCGCGGCGGCGTCATCCTGGAC TCCGGCACGTCGGTGACACGGCTTGCCAGGCCCGTGTACGAGGCCGTGCGCGACGCGTTC CGCGCGGCGGCGGTGGGGCTCCGTGTGTCGCCGGGCGGGTTCTCGCTGTTCGACACGTGC TACAACCTGAGCGGGCGGAGGGTGGTGAAGGTGCCGACGGTGTCGATGCACCTGGCGGGC GGCGCGTCGGTGGCGCTGCCGCCGGAGAACTACCTGATCCCGGTGGACACGAGCGGGACG TTCTGCTTCGCGATGGCGGGAACGGACGGCGGCGTCTCCATCATCGGCAACATACAGCAG CAGGGGTTCCGGGTGGTGTTCGACGGCGACGCCCAGCGCGTAGGCTTCGTGCCAAAGAGC TGTTAA

Peptide Sequence

PEP ID	Os05t0590000-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:29379785:29381423:-1 gene:Os05g0590000 transcript:Os05t0590000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os05t0590000-01);Peptidase A1 domain containing protein. (Os05t0590000-02)
Sequence	MLPSTAMAFHVFLIAALLLLPLPAAFSKAVRTQSLLANPLSPDPITQEQQLSLAAPRTNA STLHFRLAHREHFALNATASDLLAHLLARDAARAAALLAAPNNATRPRRRGGFAAPLLSG LPQGSGEYFAQVGVGTPATTALMVLDTGSDVVWLQCAPCRHCYAQSGRVFDPRRSRSYAA VDCVAPICRRLDSAGCDRRRNSCLYQVAYGDGSVTAGDFASETLTFARGARVQRVAIGCG HDNEGLFIAASGLLGLGRGRLSFPSQIARSFGRSFSYCLVDRTSSVRPSSTRSSTVTFGA GAVAAAAGASFTPMGRNPRMATFYYVHLLGFSVGGARVKGVSQSDLRLNPTTGRGGVILD SGTSVTRLARPVYEAVRDAFRAAAVGLRVSPGGFSLFDTCYNLSGRRVVKVPTVSMHLAG GASVALPPENYLIPVDTSGTFCFAMAGTDGGVSIIGNIQQQGFRVVFDGDAQRVGFVPKS C

Transcript Sequence

Transcript ID	Os05t0590000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:29379785:29381423:-1 gene:Os05g0590000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os05t0590000-01);Peptidase A1 domain containing protein. (Os05t0590000-02)
Sequence	CCGATCGAGATCGAGATGCTCCCCTCAACGGCAATGGCGTTCCATGTCTTCCTCATCGCT GCGCTGCTGTTGCTGCCTCTCCCCGCCGCCTTCTCCAAGGCCGTGCGCACCCAATCCCTT CTCGCCAACCCGCTCTCCCCGGATCCTATCACTCAGGAGCAGCAGCTCAGCCTCGCCGCG CCCCGCACCAACGCCTCCACGCTCCACTTCCGCCTCGCCCACCGCGAGCACTTCGCGCTC AACGCCACCGCCTCCGATCTGCTCGCGCACCTCCTCGCCCGGGACGCCGCGCGCGCCGCC GCCCTGCTTGCTGCACCCAACAATGCCACGCGCCCGCGCCGCCGCGGCGGCTTCGCGGCG CCCCTGCTGTCCGGCCTCCCGCAGGGGAGCGGGGAGTACTTCGCCCAGGTCGGGGTCGGC ACGCCCGCCACCACCGCGCTCATGGTGCTCGACACCGGCAGCGACGTCGTCTGGCTCCAG TGCGCGCCCTGCCGCCACTGCTACGCGCAGTCCGGCAGGGTCTTCGACCCGCGCCGCTCC CGCTCCTACGCCGCGGTGGACTGCGTCGCGCCCATCTGCCGCCGCCTCGATTCCGCCGGC TGCGACAGGCGCCGCAACTCCTGCCTCTACCAGGTAGCCTACGGCGACGGCTCTGTCACC GCCGGGGACTTCGCCTCCGAGACGCTCACCTTCGCGCGGGGCGCCCGCGTGCAGCGGGTG GCCATCGGGTGCGGCCACGACAACGAGGGGCTCTTCATCGCCGCGTCGGGACTCCTCGGC CTCGGCCGTGGCAGGCTGTCGTTCCCCTCCCAGATCGCCCGCAGCTTCGGCCGGAGCTTC TCCTACTGCCTCGTGGACCGGACCTCGTCGGTGAGGCCCTCCTCCACCCGCTCCTCCACC GTAACGTTCGGCGCCGGCGCGGTGGCGGCAGCGGCGGGCGCGTCCTTCACGCCGATGGGG AGGAACCCCAGGATGGCGACGTTCTACTACGTGCACCTCCTGGGCTTCAGCGTGGGCGGC GCGCGCGTGAAGGGCGTGTCCCAGTCCGACCTCCGGCTGAACCCGACCACCGGGCGCGGC GGCGTCATCCTGGACTCCGGCACGTCGGTGACACGGCTTGCCAGGCCCGTGTACGAGGCC GTGCGCGACGCGTTCCGCGCGGCGGCGGTGGGGCTCCGTGTGTCGCCGGGCGGGTTCTCG CTGTTCGACACGTGCTACAACCTGAGCGGGCGGAGGGTGGTGAAGGTGCCGACGGTGTCG ATGCACCTGGCGGGCGGCGCGTCGGTGGCGCTGCCGCCGGAGAACTACCTGATCCCGGTG GACACGAGCGGGACGTTCTGCTTCGCGATGGCGGGAACGGACGGCGGCGTCTCCATCATC GGCAACATACAGCAGCAGGGGTTCCGGGTGGTGTTCGACGGCGACGCCCAGCGCGTAGGC TTCGTGCCAAAGAGCTGTTAATTACAGTACTCCACTACGGAGTATTAGTATTACTAAGCA AGGGTGTTAAAATCGAACTCTCTTTTTTTTTTTCCTTTTTGTGAATCGATTCACTGCTTA ATTTGTACTATCGGGTATCGTTAATTTGTTAATCAAAGCCTCCTATGCCTTTGGATTTTG GCAGGAGGGAGCTGCATGT