Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0588700-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:29317649:29324873:-1 gene:Os05g0588700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Paired amphipathic helix domain containing protein. (Os05t0588700-01)
Sequence	ATGGATTCTTCCGCCGGTGATCCTGGCGATGGCGTTCCGTCCAAAAGGGCGAGGACGGAG AGGGATCCCTACAGAGTCGAGACGATGGAATTTTTGGTACTTGTCAAGTCAGAGCTTCCT GACGACGTATACAGCCATTTCGTCCGATCTATGATCAAGATAAGGAGGCAGAGGAACATG TCGATTGAAAAATGCAAAGAAATTATTCTCGAGATATTGGACGGCCAACCTGAAGCCATA CAGGTCTTCGAGCACTTCATCCAAGGATATAGCCCTTGCAGAGCAAAGATGCGTAGCAAG GCACACAATTTCGTTGAGAGAGTGAAGGCATGTCCTGATATCAGCCGCGAAGATTTCCAT GCTTTGCTGAACGTTCTTGCTAAATATTATAAGAACGAAATCAAGACCAGCGAAGAAGTT CTCGAAAAGGTTGAGAGAATCATAGGTAACTATCCCGAGTTCCTAGAAGAGTTCAAAATT TTTGTGCCTCACCACCTAAGGGCTCATCTGCCAAATGAGAAATCTTGCACAAGTCCAAAG AGTAGTCGAGTCAGCGAGACGTTTGTGAGTTTTACTCTAGATGCTATGAATAAATTGGAT GGTCTCCGAGTAAAAGCAACCAATGGAAGAAACCAAGCGACTCCATTGAAGTATACTCAG GACCAAAACCAAAACCATGAAGGCAGAGGTTATAGTTTGAGGCATAAACAAACTAAGAGA ACCACTGGCCTGATTGAAAATCCTAGAAAGCAAGGTGATGACAAATCACCTCATGCAGAA GATGATGAGGAACACAAGGCTGAACCTTTGCTTCAGTGGAGTACCTCACGAGAAAACGAA TTACCCCTAAAAGTGGATCCTAGTAATTGCAAGCATTGCACTCCTAGCTATTGCCTGCTA CCAAAGAATTGTGTGACTCTCCAGTCAAGCTACCAAACTGAACTTGGAAGGTCTATTTTA AATGATTCTTTGGTTTCTGTTACATCTGGACGTGAGGATTGCTACAAGTTCAGAACTAAA AATCAATATGAAGAAAACATGTTTAAGTGTGAAGATGACTTGTTTGAGAGTGACATGCTA TTGCAGAGGTTTAGAGCAACTGCTGACTTTATTGAGGATCTTCAATATCGGTTTGGCAGC AATGTGAAAATTCAAGAACACCTAACTCCTCTACATAAGAGGTGCATTGAACAGCTATAT GATGATTCTGGCATTGACATGCTTGATGCTTTGTCAGAATCTGAGAACACCAGTTCTGCT CTTGCTGTTATACTTTCTCGTCTAAATCAGAAGATAGGAGATTTCTCCGAGGCACGATTA TCCTTGAATAAAATGTGCCCAGATACTGTTGCCAATAATTACTACAGATCACTTGATCAT TGTAGTCCCTCCTTCAAACAACTAGACATGGAAAGGATGAGCCCAAAAGCTTTGCTGGCA GAAGACAAACAAATCAGTCGGATCAAATCTCATACTGATATTCACATTCATGAGGACGTA GGCGTTATCATTAACTATGCATATAGTAGAAGTTGTTCTACTGAAGATAAGCCAATGATG AATTGGACAAAGTTAGTAAAGGCATTTGTTTCTGTGAAGTTTCAATGGCCAGACTTGAAG GATACAGTTTCTCGCAGAAACGTTTGTGAACATTGTGGGATGAGCAGAGATTTTCTCAAT AATATTCCTGTTGCTGTGCTTACTAATGAGTTTGTTTTTTCTTCAAAGGAAGTGGAAAGT CTAAGAGCCAAGTCCAATGAGTCTACTTCTTCGCTTGATCATTTTGACGCGGAGGTTGAG GAGGGTGAGTTCATACCAGATGTAGAAAATATACAGTTGCGTGTTCGATGTTTGCCTACC AATAATTCTATGCATAGTACCTATGGACATTGGAGTGGATCTGAAGAGCATAAATCATCA AGAGATGACTCCAACAATGAGGTTGGAAGTTCAGAATATTTTGGAAGAACATCTAAAGAA TGTGATGCAAACAGAGGAATATCTTGTTGCACTCTGGCTGTGCTCTGCCGGCTTCTCCAG GTTATGTACGAGAGACTACTAGTAGCTAAGAATCTTTCAGAAGGAGCAAGCACCCATGAT TCATATGCACATTTCAAGGAGAAACTCTGCAGCCTGATTGATGGGTCTACTGACAATTGG AACTTTGAGCAGCACTGCTTGAAATTTCTTGGGCCCAACTCCTACGTACTATTTACTTTG GATAAGCTTATCGATCGTGTTATCAAGCAGATTTGCAAGATATATCCAAGCCGTGAAGAC AGCTCTGTCCTTCAGCGGCAAGAGAGGTCAAGAAGAACATTTAACATTTTGAAAGACCCA GCTTTGCCGGCAAGAAGAACAAACTCGTCCAAAGAGCTGTTGCATCATCAAAATGCAAGA GGCACATCAATTGAGTTGCCGAAGCAAGGTCGTGAGGAAGCAAAAGGAGGTTGTGAGTCC CATGGTGACACTGGAAAAATGAAACAGAACCATTTTCAGAGAAGGAAAAAACGCGCTTTG GAGAACGGTCCACCGAGTTTTTCTCAGCCTGGCTCAGGGAATCAAGCTCATAATTGA

Peptide Sequence

PEP ID	Os05t0588700-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:29317649:29324873:-1 gene:Os05g0588700 transcript:Os05t0588700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Paired amphipathic helix domain containing protein. (Os05t0588700-01)
Sequence	MDSSAGDPGDGVPSKRARTERDPYRVETMEFLVLVKSELPDDVYSHFVRSMIKIRRQRNM SIEKCKEIILEILDGQPEAIQVFEHFIQGYSPCRAKMRSKAHNFVERVKACPDISREDFH ALLNVLAKYYKNEIKTSEEVLEKVERIIGNYPEFLEEFKIFVPHHLRAHLPNEKSCTSPK SSRVSETFVSFTLDAMNKLDGLRVKATNGRNQATPLKYTQDQNQNHEGRGYSLRHKQTKR TTGLIENPRKQGDDKSPHAEDDEEHKAEPLLQWSTSRENELPLKVDPSNCKHCTPSYCLL PKNCVTLQSSYQTELGRSILNDSLVSVTSGREDCYKFRTKNQYEENMFKCEDDLFESDML LQRFRATADFIEDLQYRFGSNVKIQEHLTPLHKRCIEQLYDDSGIDMLDALSESENTSSA LAVILSRLNQKIGDFSEARLSLNKMCPDTVANNYYRSLDHCSPSFKQLDMERMSPKALLA EDKQISRIKSHTDIHIHEDVGVIINYAYSRSCSTEDKPMMNWTKLVKAFVSVKFQWPDLK DTVSRRNVCEHCGMSRDFLNNIPVAVLTNEFVFSSKEVESLRAKSNESTSSLDHFDAEVE EGEFIPDVENIQLRVRCLPTNNSMHSTYGHWSGSEEHKSSRDDSNNEVGSSEYFGRTSKE CDANRGISCCTLAVLCRLLQVMYERLLVAKNLSEGASTHDSYAHFKEKLCSLIDGSTDNW NFEQHCLKFLGPNSYVLFTLDKLIDRVIKQICKIYPSREDSSVLQRQERSRRTFNILKDP ALPARRTNSSKELLHHQNARGTSIELPKQGREEAKGGCESHGDTGKMKQNHFQRRKKRAL ENGPPSFSQPGSGNQAHN

Transcript Sequence

Transcript ID	Os05t0588700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:29317649:29324873:-1 gene:Os05g0588700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Paired amphipathic helix domain containing protein. (Os05t0588700-01)
Sequence	TCTTTCCCTCGGCCGCGCGGCCGCGCCGCGGGGGTTCTAGAAGGTTCCGGAAGGTGTGGA GTCTCGGTGCCCTCGTCGCTCGCCTCCTTCCTCCAGGCGTCCGCCGCCGCCGGCATACTT GAGGTGTTCGCCTAAATAATTAGGAGAAATAGAATGGATTCTTCCGCCGGTGATCCTGGC GATGGCGTTCCGTCCAAAAGGGCGAGGACGGAGAGGGATCCCTACAGAGTCGAGACGATG GAATTTTTGGTACTTGTCAAGTCAGAGCTTCCTGACGACGTATACAGCCATTTCGTCCGA TCTATGATCAAGATAAGGAGGCAGAGGAACATGTCGATTGAAAAATGCAAAGAAATTATT CTCGAGATATTGGACGGCCAACCTGAAGCCATACAGGTCTTCGAGCACTTCATCCAAGGA TATAGCCCTTGCAGAGCAAAGATGCGTAGCAAGGCACACAATTTCGTTGAGAGAGTGAAG GCATGTCCTGATATCAGCCGCGAAGATTTCCATGCTTTGCTGAACGTTCTTGCTAAATAT TATAAGAACGAAATCAAGACCAGCGAAGAAGTTCTCGAAAAGGTTGAGAGAATCATAGGT AACTATCCCGAGTTCCTAGAAGAGTTCAAAATTTTTGTGCCTCACCACCTAAGGGCTCAT CTGCCAAATGAGAAATCTTGCACAAGTCCAAAGAGTAGTCGAGTCAGCGAGACGTTTGTG AGTTTTACTCTAGATGCTATGAATAAATTGGATGGTCTCCGAGTAAAAGCAACCAATGGA AGAAACCAAGCGACTCCATTGAAGTATACTCAGGACCAAAACCAAAACCATGAAGGCAGA GGTTATAGTTTGAGGCATAAACAAACTAAGAGAACCACTGGCCTGATTGAAAATCCTAGA AAGCAAGGTGATGACAAATCACCTCATGCAGAAGATGATGAGGAACACAAGGCTGAACCT TTGCTTCAGTGGAGTACCTCACGAGAAAACGAATTACCCCTAAAAGTGGATCCTAGTAAT TGCAAGCATTGCACTCCTAGCTATTGCCTGCTACCAAAGAATTGTGTGACTCTCCAGTCA AGCTACCAAACTGAACTTGGAAGGTCTATTTTAAATGATTCTTTGGTTTCTGTTACATCT GGACGTGAGGATTGCTACAAGTTCAGAACTAAAAATCAATATGAAGAAAACATGTTTAAG TGTGAAGATGACTTGTTTGAGAGTGACATGCTATTGCAGAGGTTTAGAGCAACTGCTGAC TTTATTGAGGATCTTCAATATCGGTTTGGCAGCAATGTGAAAATTCAAGAACACCTAACT CCTCTACATAAGAGGTGCATTGAACAGCTATATGATGATTCTGGCATTGACATGCTTGAT GCTTTGTCAGAATCTGAGAACACCAGTTCTGCTCTTGCTGTTATACTTTCTCGTCTAAAT CAGAAGATAGGAGATTTCTCCGAGGCACGATTATCCTTGAATAAAATGTGCCCAGATACT GTTGCCAATAATTACTACAGATCACTTGATCATTGTAGTCCCTCCTTCAAACAACTAGAC ATGGAAAGGATGAGCCCAAAAGCTTTGCTGGCAGAAGACAAACAAATCAGTCGGATCAAA TCTCATACTGATATTCACATTCATGAGGACGTAGGCGTTATCATTAACTATGCATATAGT AGAAGTTGTTCTACTGAAGATAAGCCAATGATGAATTGGACAAAGTTAGTAAAGGCATTT GTTTCTGTGAAGTTTCAATGGCCAGACTTGAAGGATACAGTTTCTCGCAGAAACGTTTGT GAACATTGTGGGATGAGCAGAGATTTTCTCAATAATATTCCTGTTGCTGTGCTTACTAAT GAGTTTGTTTTTTCTTCAAAGGAAGTGGAAAGTCTAAGAGCCAAGTCCAATGAGTCTACT TCTTCGCTTGATCATTTTGACGCGGAGGTTGAGGAGGGTGAGTTCATACCAGATGTAGAA AATATACAGTTGCGTGTTCGATGTTTGCCTACCAATAATTCTATGCATAGTACCTATGGA CATTGGAGTGGATCTGAAGAGCATAAATCATCAAGAGATGACTCCAACAATGAGGTTGGA AGTTCAGAATATTTTGGAAGAACATCTAAAGAATGTGATGCAAACAGAGGAATATCTTGT TGCACTCTGGCTGTGCTCTGCCGGCTTCTCCAGGTTATGTACGAGAGACTACTAGTAGCT AAGAATCTTTCAGAAGGAGCAAGCACCCATGATTCATATGCACATTTCAAGGAGAAACTC TGCAGCCTGATTGATGGGTCTACTGACAATTGGAACTTTGAGCAGCACTGCTTGAAATTT CTTGGGCCCAACTCCTACGTACTATTTACTTTGGATAAGCTTATCGATCGTGTTATCAAG CAGATTTGCAAGATATATCCAAGCCGTGAAGACAGCTCTGTCCTTCAGCGGCAAGAGAGG TCAAGAAGAACATTTAACATTTTGAAAGACCCAGCTTTGCCGGCAAGAAGAACAAACTCG TCCAAAGAGCTGTTGCATCATCAAAATGCAAGAGGCACATCAATTGAGTTGCCGAAGCAA GGTCGTGAGGAAGCAAAAGGAGGTTGTGAGTCCCATGGTGACACTGGAAAAATGAAACAG AACCATTTTCAGAGAAGGAAAAAACGCGCTTTGGAGAACGGTCCACCGAGTTTTTCTCAG CCTGGCTCAGGGAATCAAGCTCATAATTGAACATGTAGTTATATGCAGCCCTGCAGAAGG CTATAGATTTGCAAGGATCTTTCAACACAAAATGTGCACGGCACAACAGCTATTTGAGGA TATCTGGAGGGAAGCAGAAATTTTCATGGAGAAGCAGGACACAGCATAACCAGCCCTAGG GAGAGGTTCTGCCTAGGCAGAGAGCTCTGCAACCTCCCGCTCTCCTGTAGTAACTCTCTA TCTTCTCAACCTGGGTAGCGGACTTGGCCAAAGCCCTGTAAATTGATCCTTTTGGGCTAG TTCTCCAAACCCTGTAACTTTGT