Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0586900-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:29236686:29240068:1 gene:Os05g0586900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0586900-01)
Sequence

ATGGCGAAGGCGCAGGCGCAGCTCGTCTCCCTCTCCTTCCCACCTCCCGCGCCACCCTCC
GCCCGCCCCCGCCACGCGCCGCCGCTCCTCAATGCGGCGGCGCTGCGCACCGGCGTGCCG
CCCTACTCCGCCGGCGTCCTCGTCTCCCTGCTCCGGGACTGCGCCGACCTCCACGGGGAT
GACACCGACCACCGCGTCGCGCGCCGCCTGGCCCCGCAGCTGCACTCGCTGGCGGTCAGG
ACCGGCCTCTCGCGGGACCCCCGGGTGACGTGCGCGCTCGTCGACCTCCTCGCGCGCCTC
GGCCGGGGTCCCTCCTGCGCGCGCCTGCTCCACGAGGCGGCGGAGGACGGCGCCAAGGAC
GCCGTGCTGTGGAACAAGCACGTCGCCATGCTGGCCGAGGCGGAGGAGTGGGACGAGGCG
ATCGCCGTCTTCAGGGAGATGCAGGCGCGCGGGGTGCCCGCCGACGGGTACACCTGCGCG
CGGGTGCTCCACGCGTGCGGCCGCGCGGGGGCGCTCCGCGAGGGGAGGGCCGTCCACGCG
TACGCCCTCAAGCTCGCCCTGGACGCGCACCCGCTCGTGCCCGGATTCCTCGCCGGCATG
TACGCCGAGAACGCCGACGTTGCGGCGGCCACTAGGGTGCTCGACGCGATGGGGGCGGGC
AGCGTCGTGCCGTGGAACGCGGTCGTCGCGTGCTGCGCGCGGCTCGGACTCGTGGACGAC
GCCCTGGAGCTCGCGGCGCGCATGTCCAGGTCGGGGCCGGAGCCCAACGTCGCGACGTGG
AACACCGTGCTGTCCGGCTGCTCCCGGCACGGCCGCGACCGGGAAGCGCTCGGCGTTGTC
GCCAGCATGCTGAAGCAAGGGCTGCGACCGGACGCCACCACCGTGTCGAGCCTCCTCAAA
TCAGTGGCCAACACGGGGCTGCTTCGCCATGGCATGGAAATCCACTGCTTCTTCCTGAGG
AACCAGCTCGAGCCGGACGTCTACACGGGGACGGCTCTCGTCGACATGTATGCCAAGTGC
GGCCGCCTCGATTGCGCCCAGAAGGTGCTCGACGCGCTGGAGCACAGGAACCTGACCACC
TGGAACTCGCTGGTCGCAGGGTACGCCAACGCCGGGCGGTTCGACATAGCGCTGGAGCTC
GTGGAATTGATGAAGAAGAACAGGCTTGATCCGGATATAACCACTTGGAATGGTCTGATC
ACTGGTTACTCCATGAACGGCCAGAGCTCGCAGGCGGTGCTGCTGCTCCGGCAGATCAAG
GCAGCTGGTGTGACGCCCAATGTGGTCTCATGGACGTCATTGATCTCGGGTAGCTGCCAC
AATGGGGAGTATGAAGATTCATTCTACTTTTGTCATGAGATGCAGAAGGATGGTGTCCAG
CCCAGCTTGGTTACCATGTCAGTGTTGCTCCGGGCTTGCGCTGGATTAGCTCTGCAAAAG
AAGGGCAAGGAGCTGCATTGCTTCGCGCTGCGAAGAGCATATGACTGTGACATGGTTGTG
AGCACAGCGTTAATTGACATGTACTCGAAGGGTGGAAGCTTGGTTAGTGCAAAAGTGATA
TTTGAAAGCATTCAGCAGAAGAATTTGGTGCTCTGCAATGCAATGCTAACTGGTCTGGCA
GTCCATGGGCAAGGTCGCGAAGCAATAGAACTGTTCCATGATATGTGGAACTCAGGATTG
AAGCCGGACTCCATAACCTTCACTGCACTTCTAACTGCCTGTAGATCGATGGGCTTGGTT
ACAGAAGGGTGGGAGTACTTCGACAGTATGGAGACTAAGTATGGTGTAAAGCCAACGACA
GAGAATTATGCCTGCATGGTTGACCTCTTGGCAAGGTGTGGTTATCTTGATGAGGCAATG
GATTTCATTGAGAGGTCACCGATTGATCCAGGAGCAAGCCACTGGGGGGCACTTCTCACA
GGATGCTCAATACATGGGAATCTTGCTCTTGCAGAGGTGGCTGCGAGGAATTTGTTCATA
CTGGAGCCTTACAATTCAGCCAACTATTTGTTGATGATGAATTTGTATGAGTATGAACGG
ATGTATGATGAAGCTGAGAGCCTGAAATATGCAATGAAAGCAAGAGGAGTGGATAGTAGA
CCTGGGTGGAGTTGGATACAGATTGAGCAAGGTATCCATGTCTTTGAGGTCGATGGGAAG
CCGCATCCTGAAACTGCAGAGATATATGAAGAGCTTATTCGTCTGGTGTTTCAAATAAAA
AAGGCAGGATATGTGCCAGACACCAGCTGCATAGCGTATAATGTTCAGGAAGAAGAGAAA
GAGAAGCTTCTCCTTGGCCATACTGAGAAGCTTGCTATCACTTATGGGCTGATCCGCTCA
GATGCAAGTAGAGCGCCTGTCAGGGTGATGAAGAACACCAGGATGTGCAACGACTGCCAT
GAGGTGGCAAAGCATATCTCTTCTCTATGTGATCGACAAATTATTCTTCGTGATGCTGTT
AGGTTTCACCATTTTGTGGATGGGAAATGTTCTTGCAATGATTACTGGTTATATGACGCG
GAAGAGTGA

Peptide Sequence

PEP ID

Os05t0586900-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:29236686:29240068:1 gene:Os05g0586900 transcript:Os05t0586900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0586900-01)
Sequence

MAKAQAQLVSLSFPPPAPPSARPRHAPPLLNAAALRTGVPPYSAGVLVSLLRDCADLHGD
DTDHRVARRLAPQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKD
AVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHA
YALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDD
ALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLK
SVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTT
WNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIK
AAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQK
KGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLA
VHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTT
ENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAEVAARNLFI
LEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQIEQGIHVFEVDGK
PHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYNVQEEEKEKLLLGHTEKLAITYGLIRS
DASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQIILRDAVRFHHFVDGKCSCNDYWLYDA
EE

Transcript Sequence

Transcript ID

Os05t0586900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:29236686:29240068:1 gene:Os05g0586900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0586900-01)
Sequence

ATTTCTCTCTCTTAAAAAAAAAAGTTGACCTTATCCTTCCTTCCTTTCCATGGCGAAGGC
GCAGGCGCAGCTCGTCTCCCTCTCCTTCCCACCTCCCGCGCCACCCTCCGCCCGCCCCCG
CCACGCGCCGCCGCTCCTCAATGCGGCGGCGCTGCGCACCGGCGTGCCGCCCTACTCCGC
CGGCGTCCTCGTCTCCCTGCTCCGGGACTGCGCCGACCTCCACGGGGATGACACCGACCA
CCGCGTCGCGCGCCGCCTGGCCCCGCAGCTGCACTCGCTGGCGGTCAGGACCGGCCTCTC
GCGGGACCCCCGGGTGACGTGCGCGCTCGTCGACCTCCTCGCGCGCCTCGGCCGGGGTCC
CTCCTGCGCGCGCCTGCTCCACGAGGCGGCGGAGGACGGCGCCAAGGACGCCGTGCTGTG
GAACAAGCACGTCGCCATGCTGGCCGAGGCGGAGGAGTGGGACGAGGCGATCGCCGTCTT
CAGGGAGATGCAGGCGCGCGGGGTGCCCGCCGACGGGTACACCTGCGCGCGGGTGCTCCA
CGCGTGCGGCCGCGCGGGGGCGCTCCGCGAGGGGAGGGCCGTCCACGCGTACGCCCTCAA
GCTCGCCCTGGACGCGCACCCGCTCGTGCCCGGATTCCTCGCCGGCATGTACGCCGAGAA
CGCCGACGTTGCGGCGGCCACTAGGGTGCTCGACGCGATGGGGGCGGGCAGCGTCGTGCC
GTGGAACGCGGTCGTCGCGTGCTGCGCGCGGCTCGGACTCGTGGACGACGCCCTGGAGCT
CGCGGCGCGCATGTCCAGGTCGGGGCCGGAGCCCAACGTCGCGACGTGGAACACCGTGCT
GTCCGGCTGCTCCCGGCACGGCCGCGACCGGGAAGCGCTCGGCGTTGTCGCCAGCATGCT
GAAGCAAGGGCTGCGACCGGACGCCACCACCGTGTCGAGCCTCCTCAAATCAGTGGCCAA
CACGGGGCTGCTTCGCCATGGCATGGAAATCCACTGCTTCTTCCTGAGGAACCAGCTCGA
GCCGGACGTCTACACGGGGACGGCTCTCGTCGACATGTATGCCAAGTGCGGCCGCCTCGA
TTGCGCCCAGAAGGTGCTCGACGCGCTGGAGCACAGGAACCTGACCACCTGGAACTCGCT
GGTCGCAGGGTACGCCAACGCCGGGCGGTTCGACATAGCGCTGGAGCTCGTGGAATTGAT
GAAGAAGAACAGGCTTGATCCGGATATAACCACTTGGAATGGTCTGATCACTGGTTACTC
CATGAACGGCCAGAGCTCGCAGGCGGTGCTGCTGCTCCGGCAGATCAAGGCAGCTGGTGT
GACGCCCAATGTGGTCTCATGGACGTCATTGATCTCGGGTAGCTGCCACAATGGGGAGTA
TGAAGATTCATTCTACTTTTGTCATGAGATGCAGAAGGATGGTGTCCAGCCCAGCTTGGT
TACCATGTCAGTGTTGCTCCGGGCTTGCGCTGGATTAGCTCTGCAAAAGAAGGGCAAGGA
GCTGCATTGCTTCGCGCTGCGAAGAGCATATGACTGTGACATGGTTGTGAGCACAGCGTT
AATTGACATGTACTCGAAGGGTGGAAGCTTGGTTAGTGCAAAAGTGATATTTGAAAGCAT
TCAGCAGAAGAATTTGGTGCTCTGCAATGCAATGCTAACTGGTCTGGCAGTCCATGGGCA
AGGTCGCGAAGCAATAGAACTGTTCCATGATATGTGGAACTCAGGATTGAAGCCGGACTC
CATAACCTTCACTGCACTTCTAACTGCCTGTAGATCGATGGGCTTGGTTACAGAAGGGTG
GGAGTACTTCGACAGTATGGAGACTAAGTATGGTGTAAAGCCAACGACAGAGAATTATGC
CTGCATGGTTGACCTCTTGGCAAGGTGTGGTTATCTTGATGAGGCAATGGATTTCATTGA
GAGGTCACCGATTGATCCAGGAGCAAGCCACTGGGGGGCACTTCTCACAGGATGCTCAAT
ACATGGGAATCTTGCTCTTGCAGAGGTGGCTGCGAGGAATTTGTTCATACTGGAGCCTTA
CAATTCAGCCAACTATTTGTTGATGATGAATTTGTATGAGTATGAACGGATGTATGATGA
AGCTGAGAGCCTGAAATATGCAATGAAAGCAAGAGGAGTGGATAGTAGACCTGGGTGGAG
TTGGATACAGATTGAGCAAGGTATCCATGTCTTTGAGGTCGATGGGAAGCCGCATCCTGA
AACTGCAGAGATATATGAAGAGCTTATTCGTCTGGTGTTTCAAATAAAAAAGGCAGGATA
TGTGCCAGACACCAGCTGCATAGCGTATAATGTTCAGGAAGAAGAGAAAGAGAAGCTTCT
CCTTGGCCATACTGAGAAGCTTGCTATCACTTATGGGCTGATCCGCTCAGATGCAAGTAG
AGCGCCTGTCAGGGTGATGAAGAACACCAGGATGTGCAACGACTGCCATGAGGTGGCAAA
GCATATCTCTTCTCTATGTGATCGACAAATTATTCTTCGTGATGCTGTTAGGTTTCACCA
TTTTGTGGATGGGAAATGTTCTTGCAATGATTACTGGTTATATGACGCGGAAGAGTGAGT
GTGCCAGTTCGAGAAGAGGGTGAGAAGGAGAAGATGGAGAAGGAGGAGAGGAAGGCTGTC
TGGGCATTGAGCTACTAGTACTAGCTAAGTAGGGTTCCACCACCTCTCCGTAGTCCAGTG
GCCACCACCTCTACGTCGTCGGCACTTGGGCAGCAAACAAGAAGGACTAGTGTCGCTAGT
TGCCAATCCCAGGCGGTCGTGCCCGATCTTGTGGACAGGGACGAATTGCAGGACGCCAGA
TTTTCGTACGAGGATTGGAGCTGTCTGTCACCAATTCCCGCGTGGAGGACGAGGATCCCA
CGCCGTCGCCGTCGCCGTCGGCGGCGCTGACAGTATCTTGTTCTCGGACGAGCTGAGGAC
GCGTCGCGTCCGATCGATGTCTCGCGCGGCGCGCCTGGGGGCAAGTCACAGAGAATTCCT
TCACCGGCCTCGCCGAACACAAGCTCTGGTTCGGCCTCTCCAGGAATCGTGATGCAGGTT
ACCCCTGTTGCGCCTGCGACCTCGCCGCCGCCGCATTCCCCATTCTATAATGTTTTTTAA
AACATCAATTAACCAGGGGATCTCCTGCAGAGCCAGATACTTAACTTCTATTTCTGTAAA
TGTCGGTATGATTACGATTTGTATACAGAACTAAAAAATGAATTGAATTTCATATGC