Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0586200-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:29200200:29205715:1 gene:Os05g0586200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:JASMONYL-L-ISOLEUCINE SYNTHASE 1 description:Gretchen hagen 3 (GH3) family protein, Phytochrome, Jasmonate signaling (Os05t0586200-01)
Sequence	ATGACGATCTGCAGCTGTGAGGAGACGATCAATGAGTTTGAGATGTTAACGCGTGATGCT GCGCGTGTGCAGAAGGATACACTGAAAAAGATCCTTGAGATAAATGCTAGTGCTGAGTAC CTGCAGAACTTTGGGCTTGGGGGGAGGACTGATGCCGAGAGCTACAAATCCTGCATCCCA TTGTGTGTGCACAATGATATTGAGCCCTATATCCAGCGGATTGTTGATGGCGATACCTCA CCAGTGGTCACTGGAGAACCCATCACCAACCTCTCTCTCAGTTCCGGTACAACACACGGA AAGCCCAAGTTCATTCCATTCAATGATGAATTACTTGAGACCACACTTCAAATATACCGT ACATCTTACGCGTTTAGGAACCGTGAATACCCTATTGGCCAAGGAAAAGCACTGCAGTTT GTTTATGGTAGCAAGCAAGTCATAACGAAAGGTGGCATTCTTGCAACAACTGCGACAACA AACTTGTATAGGAGACAGCGCTATAAGGAAGGCATGAAGGATATCCAGTCGCAGTGTTGC AGTCCTGATGAAGTTATCTTTGGCCCTGATTTCCACCAATCCTTGTACTGTCACTTGCTG TGTGGGTTAATATACTCAGAGGAGGTCCATTCAGTGTTCTCAACATTTGCTCACAGCCTA GTCCATGCATTCCAAACATTCGAGGAGGTTTGGGAAGATCTATGCACTGATATAAGAGAC GGTGTTCTCTCAAAGAAAGTTACAGCACCATCAATTCGTGAGGCTGTTTCAAAAATCCTG AAGCCCAATCCTGAACTTGCTGACTCAATATACAAGAAGTGTATTGGTTTGAGCAATTGG TATGGAGTGATCCCAGCACTGTGGCCAAATGCAAAGTATGTGTATGGTATCATGACAGGA TCCATGGAGCCATATCTGAAAAAATTAAGGCATTACGCAGGGAACTTGCCACTTATAAGT GCTGACTATGGCGCATCGGAAGGATGGGTTGGCTCTAACATAGACCCTACTGTGCCACCA GAGCAGGTGACATATGCTGTTCTCCCACAAGTTGGTTATTTTGAGTTCATTCCTTTGGAG AAACCAATAGGGGAGGAGACAGAAAACTCCGCCTCCATTCATTACATAGAATCAGATCCA GTTGGCTTGACTGAAGTTGAGGTCGGCAAAATCTATGAAGTTGTAATAACTAACTTTGCA GGTCTATATCGGTACAGGCTAGGAGATGTCGTGAAGATAGCACGCTTCCACAACTCCACA CCTGAGCTCCAATTCATCTGTCGCAGAAGCCTAGTGCTGAGCATCAACATCGACAAGAAC ACCGAGAAAGACCTCCAGTTGGCTGTTGAGGAGGCATCAAAGTTCCTGGAAGGAGAGAAG CTCGAAGTCATGGATTTCACGAGCTTCGTGGAACGATCAAGCGATCCAGGGCGCTACGTG ATCTTCTGGGAGCTGAGTGGCGATGCGAGTGATGAGGTCTTGAGCAGCTGCGCAAATGCC TTGGATCTAGCCTTCATTGACGCAGGCTACACGGGCTCGAGGAAGATCAAGACGATCGGC CCCCTTGAGCTCCGGATCCTCAGAAAGGGAACCTTCAAGGAGATCCTAGATCATTTCCTA AGCCTTGGTGGTGCGGTGAGCCAGTTCAAGACACCAAGGTTTGTGAACCCATCAAACAGC AAGGTGTTGCAGATACTGAGTAGAAATGTCACCCAAAGTTATTTCAGTACTGCCTATGGA TTTTGA

Peptide Sequence

PEP ID	Os05t0586200-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:29200200:29205715:1 gene:Os05g0586200 transcript:Os05t0586200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:JASMONYL-L-ISOLEUCINE SYNTHASE 1 description:Gretchen hagen 3 (GH3) family protein, Phytochrome, Jasmonate signaling (Os05t0586200-01)
Sequence	MTICSCEETINEFEMLTRDAARVQKDTLKKILEINASAEYLQNFGLGGRTDAESYKSCIP LCVHNDIEPYIQRIVDGDTSPVVTGEPITNLSLSSGTTHGKPKFIPFNDELLETTLQIYR TSYAFRNREYPIGQGKALQFVYGSKQVITKGGILATTATTNLYRRQRYKEGMKDIQSQCC SPDEVIFGPDFHQSLYCHLLCGLIYSEEVHSVFSTFAHSLVHAFQTFEEVWEDLCTDIRD GVLSKKVTAPSIREAVSKILKPNPELADSIYKKCIGLSNWYGVIPALWPNAKYVYGIMTG SMEPYLKKLRHYAGNLPLISADYGASEGWVGSNIDPTVPPEQVTYAVLPQVGYFEFIPLE KPIGEETENSASIHYIESDPVGLTEVEVGKIYEVVITNFAGLYRYRLGDVVKIARFHNST PELQFICRRSLVLSINIDKNTEKDLQLAVEEASKFLEGEKLEVMDFTSFVERSSDPGRYV IFWELSGDASDEVLSSCANALDLAFIDAGYTGSRKIKTIGPLELRILRKGTFKEILDHFL SLGGAVSQFKTPRFVNPSNSKVLQILSRNVTQSYFSTAYGF

Transcript Sequence

Transcript ID	Os05t0586200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:29200200:29205715:1 gene:Os05g0586200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:JASMONYL-L-ISOLEUCINE SYNTHASE 1 description:Gretchen hagen 3 (GH3) family protein, Phytochrome, Jasmonate signaling (Os05t0586200-01)
Sequence	ACCCGCTCTCTCCTCTCATCTCCTCCTCCTGTGTTCGTGTTCTTCTTCTTCTTGTAGCAG CGCTTAACCAACCCATCATTAGCGACCAAACCTCTCTCCCTCTCCCCCTCTGACTAATCA AAATTAAACAATTTCGATCTCCACCTTCCTCTTCTTGATTCCAGTTCCACCAGAGAGAGA CAGGGTCTTCTCTAATCCATGTGGTGCTTGTTGGTCTCGCTTGCTTCGTCTTCGTCTTCG TCTTCCTCTTCTCGCACCTAGTCCCGCCTCGTCGCCTCCTCCGGAGACCGGAGCCGGACG GGACGGTTGCCGGCGAGCGGCGGTCGCTTTCTTCTCTCGGCCCTACTCACGTTATTTTCA GTGACTCTTCTTCCAAACCAAGTGGTAAAGCCAGGATTCTACCATTACAATGACGATCTG CAGCTGTGAGGAGACGATCAATGAGTTTGAGATGTTAACGCGTGATGCTGCGCGTGTGCA GAAGGATACACTGAAAAAGATCCTTGAGATAAATGCTAGTGCTGAGTACCTGCAGAACTT TGGGCTTGGGGGGAGGACTGATGCCGAGAGCTACAAATCCTGCATCCCATTGTGTGTGCA CAATGATATTGAGCCCTATATCCAGCGGATTGTTGATGGCGATACCTCACCAGTGGTCAC TGGAGAACCCATCACCAACCTCTCTCTCAGTTCCGGTACAACACACGGAAAGCCCAAGTT CATTCCATTCAATGATGAATTACTTGAGACCACACTTCAAATATACCGTACATCTTACGC GTTTAGGAACCGTGAATACCCTATTGGCCAAGGAAAAGCACTGCAGTTTGTTTATGGTAG CAAGCAAGTCATAACGAAAGGTGGCATTCTTGCAACAACTGCGACAACAAACTTGTATAG GAGACAGCGCTATAAGGAAGGCATGAAGGATATCCAGTCGCAGTGTTGCAGTCCTGATGA AGTTATCTTTGGCCCTGATTTCCACCAATCCTTGTACTGTCACTTGCTGTGTGGGTTAAT ATACTCAGAGGAGGTCCATTCAGTGTTCTCAACATTTGCTCACAGCCTAGTCCATGCATT CCAAACATTCGAGGAGGTTTGGGAAGATCTATGCACTGATATAAGAGACGGTGTTCTCTC AAAGAAAGTTACAGCACCATCAATTCGTGAGGCTGTTTCAAAAATCCTGAAGCCCAATCC TGAACTTGCTGACTCAATATACAAGAAGTGTATTGGTTTGAGCAATTGGTATGGAGTGAT CCCAGCACTGTGGCCAAATGCAAAGTATGTGTATGGTATCATGACAGGATCCATGGAGCC ATATCTGAAAAAATTAAGGCATTACGCAGGGAACTTGCCACTTATAAGTGCTGACTATGG CGCATCGGAAGGATGGGTTGGCTCTAACATAGACCCTACTGTGCCACCAGAGCAGGTGAC ATATGCTGTTCTCCCACAAGTTGGTTATTTTGAGTTCATTCCTTTGGAGAAACCAATAGG GGAGGAGACAGAAAACTCCGCCTCCATTCATTACATAGAATCAGATCCAGTTGGCTTGAC TGAAGTTGAGGTCGGCAAAATCTATGAAGTTGTAATAACTAACTTTGCAGGTCTATATCG GTACAGGCTAGGAGATGTCGTGAAGATAGCACGCTTCCACAACTCCACACCTGAGCTCCA ATTCATCTGTCGCAGAAGCCTAGTGCTGAGCATCAACATCGACAAGAACACCGAGAAAGA CCTCCAGTTGGCTGTTGAGGAGGCATCAAAGTTCCTGGAAGGAGAGAAGCTCGAAGTCAT GGATTTCACGAGCTTCGTGGAACGATCAAGCGATCCAGGGCGCTACGTGATCTTCTGGGA GCTGAGTGGCGATGCGAGTGATGAGGTCTTGAGCAGCTGCGCAAATGCCTTGGATCTAGC CTTCATTGACGCAGGCTACACGGGCTCGAGGAAGATCAAGACGATCGGCCCCCTTGAGCT CCGGATCCTCAGAAAGGGAACCTTCAAGGAGATCCTAGATCATTTCCTAAGCCTTGGTGG TGCGGTGAGCCAGTTCAAGACACCAAGGTTTGTGAACCCATCAAACAGCAAGGTGTTGCA GATACTGAGTAGAAATGTCACCCAAAGTTATTTCAGTACTGCCTATGGATTTTGATACAA AGAAACATATTAGATGCTAGCAGCTGCATGTAATTACCTTTTTACCTCTTGTTTTTCAGC TTTACTGTAGTCTCCACCGGAAGAAAACGTTTGGTTTAGTCTCTTGAATAATCTATTTTC TTATCCTGTTTGTGACTATCTAGAATCTATGTAAATGGCCCAGCTCTAGTGAAAGTTATG GTGATGTTATCAGGAAAGAAAATGTGGTGTTTCCCGTAACAAGTGCTGCAAAGTATTATT CAGACTC