Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0583500-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:29038549:29046309:1 gene:Os05g0583500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phox-associated domain domain containing protein. (Os05t0583500-01);Hypothetical conserved gene. (Os05t0583500-02)
Sequence	ATGGCGACGGCAGGCGGCCCGGGGAGGGCGCACACGGTCCGCGACCTCGCGGAGGAGGGG AAGAAGCGGGCCGTGCTGCTCCTCGTCTTCGCCTTCGGCCTCGCCTTCCTCATGTCCCTG ACAAGCTCCTCAGTTTGGATTAACTTGCCATTTGCCACAGCTTTGATTGTTTTATTTCGC TACATATCACTTGACTATGATTTCCGTAGAAAGAGCACAACTACCACAGATAACGATGCC AGTCGCGCACTTACCAAAACAAAAAGTATTGAACCAAATAAAATCCCCTCTATTCAAAAG GATGGAAAGTCAGATTGGAAGAGCAAGGTGAATTCCCCTCCAGTTGAAGCTGCAATTGAA CAGTTCACAAGGCACCTTGTCACAGAGTGGGTAACAGATCTATGGTACTCCCGTGTAACA CCTGACAAGGAAGGTCCAGAGGAACTCATCAATATAGTTAATAATGTCCTGGGAGAGATA TCAGTCCGGGCAAGAAACGTTAACCTTATCGCTCTGCTAACCAGGGATCTGATTGATCTT ATATGCAAAAATTTGGAGCTTTATCATTTATGCCAAGCCAAGATTGGAAAAGAGAAGTTT GTTAATCTCTCGACGGAGCGTCGTGATGCTGAACTAAAACTGACCCTTATAACCGAAAAC AAGTTGCATCCAGCTTTATTTTCAGCCAGTGCTGAGCACAAGATCCTACAAAGTCTTGCT GATGGGTTGATATCAGTAACAGCAAAACCTCAGGATCTGCAGTGTTACTTCTTCCGATGT ACTGCACGAGAACTTCTTGCATGTGCAGTCATGAGACCTGTCGTGAATTTAGCAAACCCA AGGTTTATAAATGAAAGAATTGAATTGTTGGCTCTTTCTCATGCCAACAAGGCAGAAAGA GGAGTTGCAGAATCATTGGAGCATGCTACAATGGTTAAGCAAAGGGAACCTCCTATGCCA ACTGTTGATGAACTTGCTGCACTAATAGATCCCACGAGTTCAGGGGTTGAACTTGTGCGA TTTAGTCAGGATCAGTCCAAAGCTGCACCAGATACGCAACTCAGTAATACTAGACATCCA TCTAACCTCAAACCAAATTCCTCTAGTACTTCTTTGACCAATAGTTCACATCCACTTGAG TCTAGCATTTTATCTTCCACTACCCATGGTCATTCGAATTCCAGTATGTCATTGCATTCC CAAAGTAGTGGCAGGACAACTGCAGAATGTTATGAGGGAGAATGGGCACAGACCATGGAT ATCAGCTCCCAGCAAAAAAGTCAAGCCCTAGCACCTGAGCACCTTGAGAACATGTGGACT AAAGGGAAGAATTACAAATCAGAAAATGTAAAACATGTTGCGAGAGTACCTTCCAAATCT TCTTCTCTAGGCACTTCTCCAGTGCAGCAGTCAGCTCCTTACAGCACTTCTGTTGGTCAT TATCCTAGTGCTCCACAAAGGCAGACAACTATGTCTCGTTCTGATGACCAACATTTGATT AAACACTCAACTACTGCTGCATACTTAAATGGCACCAATCATCTGAGGATGGCTTTATCC AGAGAAAGTGCAGATCATGCCAGCCAAGAAGACTTTGGAGTGGACAGTGAGAGTTCATAT GCCACTGAGGAGGATGAGAATAACAATGTGACTGGGCTTGACTCTCCAGTAACGAGAGTT TGGGACAGCAAAAGTAAAGGAAATGCCACCTCATCACATATACACCATCCACTTGAATCT CCAGGTTTCCATAAAGCAAAGAAGAACAGAAGTCATATTGGCAAGTTGAAAATGACAAAA ACTTCAGGAAGAAAAAGGTCAAGGTCAAATTCTCAAAAGCCTCCTGTCTGGCAAGAGGTG GAGAGATCATCTTTATTGGTGGGGGATGATTTAAATATACTGAATACATCGGCAGATGAT TCAAGGACGGATGGACTGTATGATGATACTGAGGTGGAAAGTATGTCAAGGATGTTTAGT GGTGCGAATGCTTCATCTTTGTCATTGGCATCAACTGACTCTTCATATTCATCAAATTAT TCCACCACTAATGTGCTAGAAGACTCTTATTTGAAGTTGAAATGTGAGGTGGTAGGAGCT AGCATTGTGAAAAGTGGATCTGGCATGTTTGCTGTATATTCTGTTTCTGTGACTGATGCC AATGGTAATAGTTGGTCCATCAAGAGGAGATTTCGCCATTTCGAAGAGCTACATCGGCGT TTGAAAGAATATTCTCAGTACAATCTTCACTTGCCTCCAAAGCACTTCCTTTCGTCAGGG CTAGAGGTCCCTGTTGTTCGAGAGAGATGCAAGTTGCTTGACATATATCTAAAGAAGCTT CTTCAGATTCCCACTGTTTCAAGCTGTATAGAGGTCTGGGATTTTCTAAGTGTTGATTCA CAGACATACATCTTCACTGACACTCTCTCAGTTATCCAGACGTTGTCAGTCAATTTAGAT GAAAGATCAAAAGAGAAGAATACAAAATCATTCAATTCTTCCCAAGCTTTGAATGGGAAT TTGGTCTCTGCTAGCCAATCTTTGCATGTACATAAAGATGATACCATGCCGAAGGAGAAG GATAAAGACTTTGATGCTGTTGATGGTTTGAGATCAAGGAAGAGGAACACGGAACAGAAT TTAGGAATTGGTGTTGGCAACACAAATGCCAATCTTCATGAAGACCTCTCTGGAAGTGAC CCTGAACAGAACGAGCATTCATTTATAATAAATTCGGGAAATTCTAAAAAGACACTGTCA AGTGAAACTGACTACCCGCCTCAAAGTTTGGAGTCTGATGGATACTCAGTAGCTCCTAAT GATTGGATGGCTCCAAATCTTAGTGTGCCCTTATTTCATTTGGTTGATGTGGTTTTTCAG CTCCAAGATGGTGGCTGGATCAGGAGGCAAGCATTTTGGGTAGTGAAGCAAATACTGCAA CTGGGAATGGGAGACACATTTGATGACTGGCTTGTTGAGAAAATCCAGTTACTTAGGAAG GGGAGGATTGTTGCTTTTGCAGTTAAGCGGGTTGAACAAATACTCTGGCCAGATGGAATT TTCCTGACAAAACATCCTAAGAGAAAAGCAGCAACACCTCCACCTGGTTCCCAGAGTAAC GGCATGGCCAACTATCTGACTGATGAACAACGACTAGAGGATGCTCATCGTGCAAATTTT GTCCATGAACTAATGATAGAGAAAGCACCATCTGCGTTAGTGAGTCTGGTTGGTCGAAAG GAGTACGAAAGATGTGCTCAGGACGTCTACTTCTTTCTTCAGTCTCCAGTTTGTTTGAAG CAGCTAGCATTTGAAGTCCTAGAGCTCCTTGTACTAGCTGCATTTCCAGAGTTGGATGAC ATTGTGAAGAAGTGGCATGAAGACAAACAGCAGTTGTACGCCCTGGAATAA

Peptide Sequence

PEP ID	Os05t0583500-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:29038549:29046309:1 gene:Os05g0583500 transcript:Os05t0583500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phox-associated domain domain containing protein. (Os05t0583500-01);Hypothetical conserved gene. (Os05t0583500-02)
Sequence	MATAGGPGRAHTVRDLAEEGKKRAVLLLVFAFGLAFLMSLTSSSVWINLPFATALIVLFR YISLDYDFRRKSTTTTDNDASRALTKTKSIEPNKIPSIQKDGKSDWKSKVNSPPVEAAIE QFTRHLVTEWVTDLWYSRVTPDKEGPEELINIVNNVLGEISVRARNVNLIALLTRDLIDL ICKNLELYHLCQAKIGKEKFVNLSTERRDAELKLTLITENKLHPALFSASAEHKILQSLA DGLISVTAKPQDLQCYFFRCTARELLACAVMRPVVNLANPRFINERIELLALSHANKAER GVAESLEHATMVKQREPPMPTVDELAALIDPTSSGVELVRFSQDQSKAAPDTQLSNTRHP SNLKPNSSSTSLTNSSHPLESSILSSTTHGHSNSSMSLHSQSSGRTTAECYEGEWAQTMD ISSQQKSQALAPEHLENMWTKGKNYKSENVKHVARVPSKSSSLGTSPVQQSAPYSTSVGH YPSAPQRQTTMSRSDDQHLIKHSTTAAYLNGTNHLRMALSRESADHASQEDFGVDSESSY ATEEDENNNVTGLDSPVTRVWDSKSKGNATSSHIHHPLESPGFHKAKKNRSHIGKLKMTK TSGRKRSRSNSQKPPVWQEVERSSLLVGDDLNILNTSADDSRTDGLYDDTEVESMSRMFS GANASSLSLASTDSSYSSNYSTTNVLEDSYLKLKCEVVGASIVKSGSGMFAVYSVSVTDA NGNSWSIKRRFRHFEELHRRLKEYSQYNLHLPPKHFLSSGLEVPVVRERCKLLDIYLKKL LQIPTVSSCIEVWDFLSVDSQTYIFTDTLSVIQTLSVNLDERSKEKNTKSFNSSQALNGN LVSASQSLHVHKDDTMPKEKDKDFDAVDGLRSRKRNTEQNLGIGVGNTNANLHEDLSGSD PEQNEHSFIINSGNSKKTLSSETDYPPQSLESDGYSVAPNDWMAPNLSVPLFHLVDVVFQ LQDGGWIRRQAFWVVKQILQLGMGDTFDDWLVEKIQLLRKGRIVAFAVKRVEQILWPDGI FLTKHPKRKAATPPPGSQSNGMANYLTDEQRLEDAHRANFVHELMIEKAPSALVSLVGRK EYERCAQDVYFFLQSPVCLKQLAFEVLELLVLAAFPELDDIVKKWHEDKQQLYALE

Transcript Sequence

Transcript ID	Os05t0583500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:29038549:29046309:1 gene:Os05g0583500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phox-associated domain domain containing protein. (Os05t0583500-01);Hypothetical conserved gene. (Os05t0583500-02)
Sequence	GTCCCCGCAAAACAGAAAGTCCCCGGAAAAGGATCGCCTCGCCGGCCGCCGTTCCCTCCC CACAAACCCAAAATCAACAGCCGGCCGGCCACCGCCACCGCCACCGCCACCTCCCCTTCC TCCTCCTCTCCCGCACCCCCGCCGCCGGCAGCCGCGCGGCGGAGCTGCCGGCGATGGCGA CGGCAGGCGGCCCGGGGAGGGCGCACACGGTCCGCGACCTCGCGGAGGAGGGGAAGAAGC GGGCCGTGCTGCTCCTCGTCTTCGCCTTCGGCCTCGCCTTCCTCATGTCCCTGACAAGCT CCTCAGTTTGGATTAACTTGCCATTTGCCACAGCTTTGATTGTTTTATTTCGCTACATAT CACTTGACTATGATTTCCGTAGAAAGAGCACAACTACCACAGATAACGATGCCAGTCGCG CACTTACCAAAACAAAAAGTATTGAACCAAATAAAATCCCCTCTATTCAAAAGGATGGAA AGTCAGATTGGAAGAGCAAGGTGAATTCCCCTCCAGTTGAAGCTGCAATTGAACAGTTCA CAAGGCACCTTGTCACAGAGTGGGTAACAGATCTATGGTACTCCCGTGTAACACCTGACA AGGAAGGTCCAGAGGAACTCATCAATATAGTTAATAATGTCCTGGGAGAGATATCAGTCC GGGCAAGAAACGTTAACCTTATCGCTCTGCTAACCAGGGATCTGATTGATCTTATATGCA AAAATTTGGAGCTTTATCATTTATGCCAAGCCAAGATTGGAAAAGAGAAGTTTGTTAATC TCTCGACGGAGCGTCGTGATGCTGAACTAAAACTGACCCTTATAACCGAAAACAAGTTGC ATCCAGCTTTATTTTCAGCCAGTGCTGAGCACAAGATCCTACAAAGTCTTGCTGATGGGT TGATATCAGTAACAGCAAAACCTCAGGATCTGCAGTGTTACTTCTTCCGATGTACTGCAC GAGAACTTCTTGCATGTGCAGTCATGAGACCTGTCGTGAATTTAGCAAACCCAAGGTTTA TAAATGAAAGAATTGAATTGTTGGCTCTTTCTCATGCCAACAAGGCAGAAAGAGGAGTTG CAGAATCATTGGAGCATGCTACAATGGTTAAGCAAAGGGAACCTCCTATGCCAACTGTTG ATGAACTTGCTGCACTAATAGATCCCACGAGTTCAGGGGTTGAACTTGTGCGATTTAGTC AGGATCAGTCCAAAGCTGCACCAGATACGCAACTCAGTAATACTAGACATCCATCTAACC TCAAACCAAATTCCTCTAGTACTTCTTTGACCAATAGTTCACATCCACTTGAGTCTAGCA TTTTATCTTCCACTACCCATGGTCATTCGAATTCCAGTATGTCATTGCATTCCCAAAGTA GTGGCAGGACAACTGCAGAATGTTATGAGGGAGAATGGGCACAGACCATGGATATCAGCT CCCAGCAAAAAAGTCAAGCCCTAGCACCTGAGCACCTTGAGAACATGTGGACTAAAGGGA AGAATTACAAATCAGAAAATGTAAAACATGTTGCGAGAGTACCTTCCAAATCTTCTTCTC TAGGCACTTCTCCAGTGCAGCAGTCAGCTCCTTACAGCACTTCTGTTGGTCATTATCCTA GTGCTCCACAAAGGCAGACAACTATGTCTCGTTCTGATGACCAACATTTGATTAAACACT CAACTACTGCTGCATACTTAAATGGCACCAATCATCTGAGGATGGCTTTATCCAGAGAAA GTGCAGATCATGCCAGCCAAGAAGACTTTGGAGTGGACAGTGAGAGTTCATATGCCACTG AGGAGGATGAGAATAACAATGTGACTGGGCTTGACTCTCCAGTAACGAGAGTTTGGGACA GCAAAAGTAAAGGAAATGCCACCTCATCACATATACACCATCCACTTGAATCTCCAGGTT TCCATAAAGCAAAGAAGAACAGAAGTCATATTGGCAAGTTGAAAATGACAAAAACTTCAG GAAGAAAAAGGTCAAGGTCAAATTCTCAAAAGCCTCCTGTCTGGCAAGAGGTGGAGAGAT CATCTTTATTGGTGGGGGATGATTTAAATATACTGAATACATCGGCAGATGATTCAAGGA CGGATGGACTGTATGATGATACTGAGGTGGAAAGTATGTCAAGGATGTTTAGTGGTGCGA ATGCTTCATCTTTGTCATTGGCATCAACTGACTCTTCATATTCATCAAATTATTCCACCA CTAATGTGCTAGAAGACTCTTATTTGAAGTTGAAATGTGAGGTGGTAGGAGCTAGCATTG TGAAAAGTGGATCTGGCATGTTTGCTGTATATTCTGTTTCTGTGACTGATGCCAATGGTA ATAGTTGGTCCATCAAGAGGAGATTTCGCCATTTCGAAGAGCTACATCGGCGTTTGAAAG AATATTCTCAGTACAATCTTCACTTGCCTCCAAAGCACTTCCTTTCGTCAGGGCTAGAGG TCCCTGTTGTTCGAGAGAGATGCAAGTTGCTTGACATATATCTAAAGAAGCTTCTTCAGA TTCCCACTGTTTCAAGCTGTATAGAGGTCTGGGATTTTCTAAGTGTTGATTCACAGACAT ACATCTTCACTGACACTCTCTCAGTTATCCAGACGTTGTCAGTCAATTTAGATGAAAGAT CAAAAGAGAAGAATACAAAATCATTCAATTCTTCCCAAGCTTTGAATGGGAATTTGGTCT CTGCTAGCCAATCTTTGCATGTACATAAAGATGATACCATGCCGAAGGAGAAGGATAAAG ACTTTGATGCTGTTGATGGTTTGAGATCAAGGAAGAGGAACACGGAACAGAATTTAGGAA TTGGTGTTGGCAACACAAATGCCAATCTTCATGAAGACCTCTCTGGAAGTGACCCTGAAC AGAACGAGCATTCATTTATAATAAATTCGGGAAATTCTAAAAAGACACTGTCAAGTGAAA CTGACTACCCGCCTCAAAGTTTGGAGTCTGATGGATACTCAGTAGCTCCTAATGATTGGA TGGCTCCAAATCTTAGTGTGCCCTTATTTCATTTGGTTGATGTGGTTTTTCAGCTCCAAG ATGGTGGCTGGATCAGGAGGCAAGCATTTTGGGTAGTGAAGCAAATACTGCAACTGGGAA TGGGAGACACATTTGATGACTGGCTTGTTGAGAAAATCCAGTTACTTAGGAAGGGGAGGA TTGTTGCTTTTGCAGTTAAGCGGGTTGAACAAATACTCTGGCCAGATGGAATTTTCCTGA CAAAACATCCTAAGAGAAAAGCAGCAACACCTCCACCTGGTTCCCAGAGTAACGGCATGG CCAACTATCTGACTGATGAACAACGACTAGAGGATGCTCATCGTGCAAATTTTGTCCATG AACTAATGATAGAGAAAGCACCATCTGCGTTAGTGAGTCTGGTTGGTCGAAAGGAGTACG AAAGATGTGCTCAGGACGTCTACTTCTTTCTTCAGTCTCCAGTTTGTTTGAAGCAGCTAG CATTTGAAGTCCTAGAGCTCCTTGTACTAGCTGCATTTCCAGAGTTGGATGACATTGTGA AGAAGTGGCATGAAGACAAACAGCAGTTGTACGCCCTGGAATAATTTTTCATGGTGAACG AATTATTCCGCAGGGTCAGATCAAACACGTATGCTTGATGCAGAGTGCAGATCCATTCCA GTGTAAATAAGGGAATCCCGAAATCAGTGCTGTTTTGACATTTCTGTTTAAATGGAGGCG ACTTCGTGCAGTGTGAATATGATTAGTTAGCAGTTTGTGAGAACGGTCCCTTCTCCCCCA TGGACCAGTAGGCCGTTTTTTTGTTCGACAGACTGGTCTCTCTTTTTTTTTCTCATAGAA TCATAGAGTTTGGTATACATAATGCAGCTTGAAAGAAAGAGGTCACACAGTATTTTTTTA CTGTAGGTGTAGGGTTGATGTACTTTTTGTTAGCGTCTGTTTTTTGTCCCCTGTGGGTGT TACCAAATTTTGTAACTCCGCATTACGTTGAATGAAATAAAGAAGTGATCCAGGAATTCC TC