Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0581800-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:28940354:28948383:1 gene:Os05g0581800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1296 family protein. (Os05t0581800-01);Protein of unknown function DUF1296 domain containing protein. (Os05t0581800-02);Hypothetical conserved gene. (Os05t0581800-03)
Sequence	ATGGACCCCGACGTCGCCGTCGAGCGCCTCATCTCGCAAGATCCTTTTCATGAAGTGAGA AGAAAGCGTGACAAGAAAAAGGAGATCAAAGCACCTCAGGAAACCAGGCCTCGGCCATTT TATAAACCTGCATTTCGAGGATCTAAGACTGGAGGAGATTCAACTGGCAGTGGTAAAGGC CCTACCAAGAAAGAAACGGAGTTACATTCTCTTCCTAAATCATCAGTCTCTGATTCTGTG AAGGAAAGCAATCCAACTGAGAAGATTTCAGCAGCCGACCATGCTACTATCAATGACAGT CTTATTTTATCAAGTGGCCAAGCTGATGCAAAGTCCACTCCTCTCCAGCCCCCTTCTCAA GTGAAGCATGGTTGGGGTGGGATGCCAGGGCGCCCTTCCATGGCTGATATTGTCAAGATG GGCAAACCCCAAGCTAAACCTGTGAGATCTGTTGCATGTAATACCGGGATGCCAACCATT GGTGGTTCAGTCATTTCCAATGCAACAAATCATACTTCAAAAGATTCACAAGACCTAGTT TTGCCTTCACAAGTGAACTCTGTTGCAACTGATAGAATACCAAATGGTACCAATGAGGTC TCCCCTGCATCTAATGACTCCTCTATTGATGTATTACCTCCCAGAGAGGGGTTGGAGGTG CCAGAATCTGTCGCCACAGTTAAACCTGGATCGTCAACTGCAGATGTTTACAAAGATGAA GTTGAAGAAGACATGGATTCTGATAAAAATAAGGATATGAGTGCAAGCAATGCAGACGAT CGAACATCTTCAGGACCATATCCTGCATCTAGCAAAGAAGTACACTCAGAACATACTCAA ATTGCCACCCATCACAATGACTTGATAGTGGAAACAGAGGACTCTCAGTCTGATGGCAAT GCATTTGAGAATAACCGTGTTGCAGATTCAGAGGGAAATATGTCTGCTACTGACAAACAG TTTGAACAGTTGATTCTACATGAGGAAAAAAAATCAAAATCATCTGAAGATAACCCGGCT GTAATAATTCCTGATCATCTTCAGGTTTCAAATGCTGATTGTGCACACTTGACATTTGGT AGTTTTGTGTCTGGAACACTTGATGCGCCAGTCTCCTTGAAAACTGCCAATGGTGATGAG GAGGTTGCAGCAGTTTCTGATAACCATTCGATTGATCAGTCAGATGTCAGAATCCATGAG TACGAAAATAAGGATACAGTAGCACCTGCAGCTGACGAACATGTTGCCTCTTCAACAAAA AGTGACACGGAGAATGTTGATGTTGCACCTGTACAACAGCCTGAATTGAGAACAGCCGAT TTAATAGATGTTCCAAACAACACCATGTACAATAATTTATCAACCTCCGATTATGCAACT CCAAGTGCAGTGCAACCAGATTCTTCCGCACACATTTATCTGCAAGAACATCGACAATTG CAAAACATTTCCCCTCTCTCTAGCTTTATGCAAGGAAATATCCCGAATGGACTATTGCCA CCAGCACTTCCACCTTTGCGTGACTTTGATCCTGCTTTCTCATTATTACTTACTAACCCA CCATTGGCTACGATGGTTCATGGCACAACATCATCGTCCATGGGCAATGCAACTACTGTT TCTACACAACCACAAGAGATTGTGAATCCAGGTGCTTCATCCAACCCTCAATTGAATCAA TCTCAGCCAAGCACCAGCACCAGCATTGCTTCTGGTCCTCCACTCCCTCAGCATCTCACG CTTCACCCTTATGCTCAAGCAACTCTTCCTCTTGGGTATGCAAGCATGATTGGCTACCCA TCTCTAGCCCCAAGTTATACATATCTCCCGCCTCCTGCCTTTCAGCAACCATACATGAAC AGTGGCCTATTCCACCAAGCAGCAGCTGCAGTTCCCAATTCCAGTGTAAAATATCCTTTG CCACAGTACAAAGGCAATGTTTCCCTTGCGAGCTTACCCCAGCAAGCCTCACTGCTCTCA AGCTATGTTGGGGGCTTTGGAGCTGCAAGCAGCATGCCAGGAAATTTTGCCCTGAACCAA AGCACACCATCAGCAACCGCTGCTCCTGGGTTTGATGGAACAGTGCCCGCGCAATACAAA GAAGGGAATCAATTTGTATCTCTTCAGCAGAGCGAGAACGCTGCGATGTGGATGCATGGT GCCAGTTCGCGAACAATGCCACCTCTTGCAGCAAATGCCTTGTATTATCAAGGGCAGCAG GGTCACCAGGGCGGCCTTCGGCAGGGGCAGCTGCCTTCACAGTTTGGTGCTCCACTTGCA CCGACACAGCCCGGCCTGGGCCATGAGCACCGGAACCCTAGTGACGGCAACTTAAGCTCT GCTGCCGCTGCCGCTCAGGCTAACCAAATGTGGCCAAATAGTTACTGA

Peptide Sequence

PEP ID	Os05t0581800-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:28940354:28948383:1 gene:Os05g0581800 transcript:Os05t0581800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1296 family protein. (Os05t0581800-01);Protein of unknown function DUF1296 domain containing protein. (Os05t0581800-02);Hypothetical conserved gene. (Os05t0581800-03)
Sequence	MDPDVAVERLISQDPFHEVRRKRDKKKEIKAPQETRPRPFYKPAFRGSKTGGDSTGSGKG PTKKETELHSLPKSSVSDSVKESNPTEKISAADHATINDSLILSSGQADAKSTPLQPPSQ VKHGWGGMPGRPSMADIVKMGKPQAKPVRSVACNTGMPTIGGSVISNATNHTSKDSQDLV LPSQVNSVATDRIPNGTNEVSPASNDSSIDVLPPREGLEVPESVATVKPGSSTADVYKDE VEEDMDSDKNKDMSASNADDRTSSGPYPASSKEVHSEHTQIATHHNDLIVETEDSQSDGN AFENNRVADSEGNMSATDKQFEQLILHEEKKSKSSEDNPAVIIPDHLQVSNADCAHLTFG SFVSGTLDAPVSLKTANGDEEVAAVSDNHSIDQSDVRIHEYENKDTVAPAADEHVASSTK SDTENVDVAPVQQPELRTADLIDVPNNTMYNNLSTSDYATPSAVQPDSSAHIYLQEHRQL QNISPLSSFMQGNIPNGLLPPALPPLRDFDPAFSLLLTNPPLATMVHGTTSSSMGNATTV STQPQEIVNPGASSNPQLNQSQPSTSTSIASGPPLPQHLTLHPYAQATLPLGYASMIGYP SLAPSYTYLPPPAFQQPYMNSGLFHQAAAAVPNSSVKYPLPQYKGNVSLASLPQQASLLS SYVGGFGAASSMPGNFALNQSTPSATAAPGFDGTVPAQYKEGNQFVSLQQSENAAMWMHG ASSRTMPPLAANALYYQGQQGHQGGLRQGQLPSQFGAPLAPTQPGLGHEHRNPSDGNLSS AAAAAQANQMWPNSY

Transcript Sequence

Transcript ID	Os05t0581800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:28940354:28948383:1 gene:Os05g0581800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1296 family protein. (Os05t0581800-01);Protein of unknown function DUF1296 domain containing protein. (Os05t0581800-02);Hypothetical conserved gene. (Os05t0581800-03)
Sequence	GTGCCCTTCTACGCCGCGGCGGCGGCGGCGGAGCCTCGGGCGGGGGATGCGGCCGCGATC CCGCCGGCGTCGAGGAAGCTGGTGCAGGGGCTTAAGGGGATCCTGACCGACCGCTCCGAG GCCGAGATCTACGCCACGCTCCTGGATTGCGGCATGGACCCCGACGTCGCCGTCGAGCGC CTCATCTCGCAAGATCCTTTTCATGAAGTGAGAAGAAAGCGTGACAAGAAAAAGGAGATC AAAGCACCTCAGGAAACCAGGCCTCGGCCATTTTATAAACCTGCATTTCGAGGATCTAAG ACTGGAGGAGATTCAACTGGCAGTGGTAAAGGCCCTACCAAGAAAGAAACGGAGTTACAT TCTCTTCCTAAATCATCAGTCTCTGATTCTGTGAAGGAAAGCAATCCAACTGAGAAGATT TCAGCAGCCGACCATGCTACTATCAATGACAGTCTTATTTTATCAAGTGGCCAAGCTGAT GCAAAGTCCACTCCTCTCCAGCCCCCTTCTCAAGTGAAGCATGGTTGGGGTGGGATGCCA GGGCGCCCTTCCATGGCTGATATTGTCAAGATGGGCAAACCCCAAGCTAAACCTGTGAGA TCTGTTGCATGTAATACCGGGATGCCAACCATTGGTGGTTCAGTCATTTCCAATGCAACA AATCATACTTCAAAAGATTCACAAGACCTAGTTTTGCCTTCACAAGTGAACTCTGTTGCA ACTGATAGAATACCAAATGGTACCAATGAGGTCTCCCCTGCATCTAATGACTCCTCTATT GATGTATTACCTCCCAGAGAGGGGTTGGAGGTGCCAGAATCTGTCGCCACAGTTAAACCT GGATCGTCAACTGCAGATGTTTACAAAGATGAAGTTGAAGAAGACATGGATTCTGATAAA AATAAGGATATGAGTGCAAGCAATGCAGACGATCGAACATCTTCAGGACCATATCCTGCA TCTAGCAAAGAAGTACACTCAGAACATACTCAAATTGCCACCCATCACAATGACTTGATA GTGGAAACAGAGGACTCTCAGTCTGATGGCAATGCATTTGAGAATAACCGTGTTGCAGAT TCAGAGGGAAATATGTCTGCTACTGACAAACAGTTTGAACAGTTGATTCTACATGAGGAA AAAAAATCAAAATCATCTGAAGATAACCCGGCTGTAATAATTCCTGATCATCTTCAGGTT TCAAATGCTGATTGTGCACACTTGACATTTGGTAGTTTTGTGTCTGGAACACTTGATGCG CCAGTCTCCTTGAAAACTGCCAATGGTGATGAGGAGGTTGCAGCAGTTTCTGATAACCAT TCGATTGATCAGTCAGATGTCAGAATCCATGAGTACGAAAATAAGGATACAGTAGCACCT GCAGCTGACGAACATGTTGCCTCTTCAACAAAAAGTGACACGGAGAATGTTGATGTTGCA CCTGTACAACAGCCTGAATTGAGAACAGCCGATTTAATAGATGTTCCAAACAACACCATG TACAATAATTTATCAACCTCCGATTATGCAACTCCAAGTGCAGTGCAACCAGATTCTTCC GCACACATTTATCTGCAAGAACATCGACAATTGCAAAACATTTCCCCTCTCTCTAGCTTT ATGCAAGGAAATATCCCGAATGGACTATTGCCACCAGCACTTCCACCTTTGCGTGACTTT GATCCTGCTTTCTCATTATTACTTACTAACCCACCATTGGCTACGATGGTTCATGGCACA ACATCATCGTCCATGGGCAATGCAACTACTGTTTCTACACAACCACAAGAGATTGTGAAT CCAGGTGCTTCATCCAACCCTCAATTGAATCAATCTCAGCCAAGCACCAGCACCAGCATT GCTTCTGGTCCTCCACTCCCTCAGCATCTCACGCTTCACCCTTATGCTCAAGCAACTCTT CCTCTTGGGTATGCAAGCATGATTGGCTACCCATCTCTAGCCCCAAGTTATACATATCTC CCGCCTCCTGCCTTTCAGCAACCATACATGAACAGTGGCCTATTCCACCAAGCAGCAGCT GCAGTTCCCAATTCCAGTGTAAAATATCCTTTGCCACAGTACAAAGGCAATGTTTCCCTT GCGAGCTTACCCCAGCAAGCCTCACTGCTCTCAAGCTATGTTGGGGGCTTTGGAGCTGCA AGCAGCATGCCAGGAAATTTTGCCCTGAACCAAAGCACACCATCAGCAACCGCTGCTCCT GGGTTTGATGGAACAGTGCCCGCGCAATACAAAGAAGGGAATCAATTTGTATCTCTTCAG CAGAGCGAGAACGCTGCGATGTGGATGCATGGTGCCAGTTCGCGAACAATGCCACCTCTT GCAGCAAATGCCTTGTATTATCAAGGGCAGCAGGGTCACCAGGGCGGCCTTCGGCAGGGG CAGCTGCCTTCACAGTTTGGTGCTCCACTTGCACCGACACAGCCCGGCCTGGGCCATGAG CACCGGAACCCTAGTGACGGCAACTTAAGCTCTGCTGCCGCTGCCGCTCAGGCTAACCAA ATGTGGCCAAATAGTTACTGACCCAGCCTTTGAAACCCTTTTGAGTGTGTGGTCCTGTTG TGGTGCGTGCTACGTCAGAGATGCCATGCAATGCTTTTGGCCTGATTCAGGCGCCTGAAT AGCAACTGTGTATATGAGTTGCTATGTCGACATTTTGGAGAGGCAGAGGAGATGTATGTT TGATCATCATGTTCTACTACCCTTAGCATTTTCTAGGATGGCCTAAAACTGTAGCTCTAT TTATTTATATTCTGATAGAAAGGACCGTTCTTTCTCAGTTTGTTTTGTTCTTCCGTTTAC ATATCATGTAAACAATAAAACTGAGATATCTAACAAAGCAGCACCATGAATGAATTTCAA GGAAGCAAAGGATGAGCTAGCTTTGTATC