Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0580000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:28871794:28877277:-1 gene:Os05g0580000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 3 description:Similar to ADP-glucose pyrophosphorylase (EC 2.7.7.27) (Fragment). (Os05t0580000-01)
Sequence	ATGCAGTTCAGCAGTGTGTTTCCCTTAGAGGGTAAAGCATGCGTGAGCCCAATAAGGAGA GGTGGTGAGGGCTCAGCTAGTGATAGATTGAAGATCGGGGACAGTAGCAGCATCAAGCAT GATAGAGCAGTGAGGAGGATGTGTCTTGGTTATAGGGGCACCAAAAACGGTGCACAATGT GTGCTCACCTCAGATGCTGGCCCAGACACTCTTCATGTCCGAACATCATTCCGGAGGAAC TTTGCGGATCCAAATGAGGTTGCTGCTGTTATATTGGGTGGTGGCACCGGGACTCAACTT TTTCCTCTCACAAGCACAAGGGCCACGCCTGCTGTTCCTATTGGAGGATGCTATAGGCTT ATCGATATCCCCATGAGCAACTGTTTCAACAGTGGCATAAACAAGATATTCATAATGACT CAATTCAACTCAGCATCTCTTAATCGTCACATTCATCGTACGTACCTTGGTGGTGGAATC AACTTTACTGATGGATCTGTTGAGGTATTAGCCGCTACACAAATGCCTGGGGAGGCTGCT GGTTGGTTCCAGGGTACAGCAGATGCAGTTAGAAAATTTATCTGGGTTCTTGAGGACTAT TACAAGCATAAAGCTATAGAACACATTTTAATCTTGTCAGGAGATCAGCTTTATCGTATG GACTACATGGAGCTTGTGCAGAAACATGTTGATGACAATGCTGACATTACTTTATCATGT GCTCCTGTTGGAGAGAGTCGAGCATCTGACTATGGACTAGTGAAGTTCGACAGTTCAGGC CGTGTAATTCAATTTTCTGAAAAACCCAAGGGCACTGACTTGGAAGCAATGAAAGTGGAT ACCAGCTTTCTCAATTTTGCCATAGACGACCCGACTAAATTTCCCTACATTGCTTCGATG GGAGTTTATGTCTTCAAAAGAGATGTTCTTTTAAACCTTCTAAAGTCAAGATATGCAGAA CTACATGACTTTGGGTCTGAAATCCTCCCAAGAGCTTTACATGAGCACAATGTACAGGCA TATGTCTTCGCTGACTACTGGGAAGACATTGGAACGATCAGATCGTTCTTTGATGCAAAC ATGGCCCTTTGCGAGCAGCCTCCCAAGTTTGAGTTTTATGATCCAAAAACTCCCTTCTTC ACTTCACCTCGATATTTGCCGCCAACAAAGTCAGATAAATGCAGGATTAAAGATGCGATA ATTTCCCATGGCTGTTTCTTGCGTGAATGTACCATCGAGCATTCGATAGTTGGAGTCCGC TCACGCCTTAACTCTGCATGTGAGCTCAAGAATACCATGATGATGGGTGCGGATTTGTAC GAAACTGAAGATGAAATTTCAAGACTACTGTCAGAAGGCAAGGTCCCCATTGGTGTAGGG GAAAACACAAAGATAAACAACTGCATCATCGACATGAACGCGAGGGTTGGAAGGAACGTG GTCATCACAAACAGCGAGGGTGTCCAAGAAAGTGATCGGCCTGAGGAAGGGTACTACATA AGGTCGGGAATCGTGGTGATCCTGAAGAACGCGACCATCAAGGACGGGAAGGTCATATAG

Peptide Sequence

PEP ID	Os05t0580000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:28871794:28877277:-1 gene:Os05g0580000 transcript:Os05t0580000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 3 description:Similar to ADP-glucose pyrophosphorylase (EC 2.7.7.27) (Fragment). (Os05t0580000-01)
Sequence	MQFSSVFPLEGKACVSPIRRGGEGSASDRLKIGDSSSIKHDRAVRRMCLGYRGTKNGAQC VLTSDAGPDTLHVRTSFRRNFADPNEVAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRL IDIPMSNCFNSGINKIFIMTQFNSASLNRHIHRTYLGGGINFTDGSVEVLAATQMPGEAA GWFQGTADAVRKFIWVLEDYYKHKAIEHILILSGDQLYRMDYMELVQKHVDDNADITLSC APVGESRASDYGLVKFDSSGRVIQFSEKPKGTDLEAMKVDTSFLNFAIDDPTKFPYIASM GVYVFKRDVLLNLLKSRYAELHDFGSEILPRALHEHNVQAYVFADYWEDIGTIRSFFDAN MALCEQPPKFEFYDPKTPFFTSPRYLPPTKSDKCRIKDAIISHGCFLRECTIEHSIVGVR SRLNSACELKNTMMMGADLYETEDEISRLLSEGKVPIGVGENTKINNCIIDMNARVGRNV VITNSEGVQESDRPEEGYYIRSGIVVILKNATIKDGKVI

Transcript Sequence

Transcript ID	Os05t0580000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:28871794:28877277:-1 gene:Os05g0580000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 3 description:Similar to ADP-glucose pyrophosphorylase (EC 2.7.7.27) (Fragment). (Os05t0580000-01)
Sequence	CCCCCACATGGGGCGGGCGAAACGCCAAACGAAACGAGGCGCTGCCCTGCCACCTTCGCC TCACGAACGCCAGCCTCGCTGTTTCCCCTCCCTCTCGCACCGCTCGTTCCCGTTTGCCTT CTTTCTCTCCTCCCCCCCGTTCAGCTTCCCGTTCAGGTTCAGGCAATCACGCCTCCTCTC CTCTCCTCTCCTCTCCTTCTTCACTCCACTCCAACGCCCCACGCCCTCCCCCGCTTTATA AGGGGGAGCTCCACATCACCACCCTTCCCACACCATCGCGGCAGCCACCGCATCTTTCCT CCTCTTTCCCTGGAGCCATTTCCTCCCCTAAAGGGCCTTTCCTTTTCTTGATCTCTCTTC TATCTTCGATCCATCCATCCATCCGGCCATCCTTCCTAGGTGAATTTCAACGATGCAGTT CAGCAGTGTGTTTCCCTTAGAGGGTAAAGCATGCGTGAGCCCAATAAGGAGAGGTGGTGA GGGCTCAGCTAGTGATAGATTGAAGATCGGGGACAGTAGCAGCATCAAGCATGATAGAGC AGTGAGGAGGATGTGTCTTGGTTATAGGGGCACCAAAAACGGTGCACAATGTGTGCTCAC CTCAGATGCTGGCCCAGACACTCTTCATGTCCGAACATCATTCCGGAGGAACTTTGCGGA TCCAAATGAGGTTGCTGCTGTTATATTGGGTGGTGGCACCGGGACTCAACTTTTTCCTCT CACAAGCACAAGGGCCACGCCTGCTGTTCCTATTGGAGGATGCTATAGGCTTATCGATAT CCCCATGAGCAACTGTTTCAACAGTGGCATAAACAAGATATTCATAATGACTCAATTCAA CTCAGCATCTCTTAATCGTCACATTCATCGTACGTACCTTGGTGGTGGAATCAACTTTAC TGATGGATCTGTTGAGGTATTAGCCGCTACACAAATGCCTGGGGAGGCTGCTGGTTGGTT CCAGGGTACAGCAGATGCAGTTAGAAAATTTATCTGGGTTCTTGAGGACTATTACAAGCA TAAAGCTATAGAACACATTTTAATCTTGTCAGGAGATCAGCTTTATCGTATGGACTACAT GGAGCTTGTGCAGAAACATGTTGATGACAATGCTGACATTACTTTATCATGTGCTCCTGT TGGAGAGAGTCGAGCATCTGACTATGGACTAGTGAAGTTCGACAGTTCAGGCCGTGTAAT TCAATTTTCTGAAAAACCCAAGGGCACTGACTTGGAAGCAATGAAAGTGGATACCAGCTT TCTCAATTTTGCCATAGACGACCCGACTAAATTTCCCTACATTGCTTCGATGGGAGTTTA TGTCTTCAAAAGAGATGTTCTTTTAAACCTTCTAAAGTCAAGATATGCAGAACTACATGA CTTTGGGTCTGAAATCCTCCCAAGAGCTTTACATGAGCACAATGTACAGGCATATGTCTT CGCTGACTACTGGGAAGACATTGGAACGATCAGATCGTTCTTTGATGCAAACATGGCCCT TTGCGAGCAGCCTCCCAAGTTTGAGTTTTATGATCCAAAAACTCCCTTCTTCACTTCACC TCGATATTTGCCGCCAACAAAGTCAGATAAATGCAGGATTAAAGATGCGATAATTTCCCA TGGCTGTTTCTTGCGTGAATGTACCATCGAGCATTCGATAGTTGGAGTCCGCTCACGCCT TAACTCTGCATGTGAGCTCAAGAATACCATGATGATGGGTGCGGATTTGTACGAAACTGA AGATGAAATTTCAAGACTACTGTCAGAAGGCAAGGTCCCCATTGGTGTAGGGGAAAACAC AAAGATAAACAACTGCATCATCGACATGAACGCGAGGGTTGGAAGGAACGTGGTCATCAC AAACAGCGAGGGTGTCCAAGAAAGTGATCGGCCTGAGGAAGGGTACTACATAAGGTCGGG AATCGTGGTGATCCTGAAGAACGCGACCATCAAGGACGGGAAGGTCATATAGGAGAGCTC GCTGATGCCACAGATCTCTGAACCCTGAACCTGCAAATGCAGTGCAGTGCGTCTTTTCTT GAGGGGTTAGGACATGCAAGCTCGTTGATTCCACATGGCAGAGAACTCGAGGGAAGATCC CAGGAAGACGGATGATCGAGAAAGATTGTGTAGTACTAGCAGTTCTTCGCTCGTTAAAAT GTGTGTACTAAATAACTAATAAGCTGCCCCGAGTGAAGTAGCAGCAGCAACTTTTTGGAG GGTCGTTGGTGCATCTCATGTGTAAATAAACTCAAAACTGGTAAAAAAATGTATCCATCA TGCCATTATCTCCATTTTCTGTTTCGCTGCT