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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0579800-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:28854843:28857818:1 gene:Os05g0579800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:anaphase-promoting complex subunit 10, ANAPHASE PROMOTING COMPLEX 10 description:Similar to Anaphase promoting complex subunit 10 (APC10) (Cyclosome subunit 10). (Os05t0579800-01)
Sequence

ATGGAATCCGACGGCGAGGAGGAGGCCGCGGCGACCCCGGGGGCCGGCGGCGCGCCGGCG
GCGGGGAGGCTGAAGGGCTGCCCGGAGCTCATGGTGGACGACGACATGCGGGAGATGGCG
AAGACGGCCGCCTGGAGCGTCAGCTCCTGCAAGCCCGGCAACGGCGTCGCCTCCCTCCGC
GACGACAACCTCGACACCTACTGGCAGTCGGACGGGGCGCAGCCGCACTTGGTGAACATT
CAGTTCCAGAAGAAGGTGCAGCTGCAGCTTGTCGTGGTGTATGTGGATTTCAAGCTCGAC
GAGAGCTATACGCCTAGCAAGATCTCTGTCCGGGCCGGCGATGGCTTCCACAATCTCAAG
GAAATTAAAACTGTGGAGCTTTCAAAGCCAGTTGGGTGGGTTCATATATCATTATCTGGA
GCTGATCCCCGAGAAACATTCATTCATACATTTATGCTCCAAATTTCGGTGTTGTCCAAT
CACTTGAATGGGAGGGATACTCATATTCGACAGATCAAGATATATGGGCCAAGACCGAAT
CATGTTCCCCATCAGCCATTTCACTTCACTTCAAGGGAATTCGTCACCTACTCTACTGTT
AGGTGA

Peptide Sequence

PEP ID

Os05t0579800-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:28854843:28857818:1 gene:Os05g0579800 transcript:Os05t0579800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:anaphase-promoting complex subunit 10, ANAPHASE PROMOTING COMPLEX 10 description:Similar to Anaphase promoting complex subunit 10 (APC10) (Cyclosome subunit 10). (Os05t0579800-01)
Sequence

MESDGEEEAAATPGAGGAPAAGRLKGCPELMVDDDMREMAKTAAWSVSSCKPGNGVASLR
DDNLDTYWQSDGAQPHLVNIQFQKKVQLQLVVVYVDFKLDESYTPSKISVRAGDGFHNLK
EIKTVELSKPVGWVHISLSGADPRETFIHTFMLQISVLSNHLNGRDTHIRQIKIYGPRPN
HVPHQPFHFTSREFVTYSTVR

Transcript Sequence

Transcript ID

Os05t0579800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:28854843:28857818:1 gene:Os05g0579800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:anaphase-promoting complex subunit 10, ANAPHASE PROMOTING COMPLEX 10 description:Similar to Anaphase promoting complex subunit 10 (APC10) (Cyclosome subunit 10). (Os05t0579800-01)
Sequence

ACGAACGGCGGCGATGGAATCCGACGGCGAGGAGGAGGCCGCGGCGACCCCGGGGGCCGG
CGGCGCGCCGGCGGCGGGGAGGCTGAAGGGCTGCCCGGAGCTCATGGTGGACGACGACAT
GCGGGAGATGGCGAAGACGGCCGCCTGGAGCGTCAGCTCCTGCAAGCCCGGCAACGGCGT
CGCCTCCCTCCGCGACGACAACCTCGACACCTACTGGCAGTCGGACGGGGCGCAGCCGCA
CTTGGTGAACATTCAGTTCCAGAAGAAGGTGCAGCTGCAGCTTGTCGTGGTGTATGTGGA
TTTCAAGCTCGACGAGAGCTATACGCCTAGCAAGATCTCTGTCCGGGCCGGCGATGGCTT
CCACAATCTCAAGGAAATTAAAACTGTGGAGCTTTCAAAGCCAGTTGGGTGGGTTCATAT
ATCATTATCTGGAGCTGATCCCCGAGAAACATTCATTCATACATTTATGCTCCAAATTTC
GGTGTTGTCCAATCACTTGAATGGGAGGGATACTCATATTCGACAGATCAAGATATATGG
GCCAAGACCGAATCATGTTCCCCATCAGCCATTTCACTTCACTTCAAGGGAATTCGTCAC
CTACTCTACTGTTAGGTGACAGCTGACTAATTTAATTCCGTGGAACCCTCCACATTGGAG
CTTTTGTTGAAGATTTTGGATAGCTCAGCACACATGTGAACAGATTGTGTGGTCGATCCC
ATTCTCTGTGCTTCAGAATTCAGTCTCGCATGATGTGCACCCAGAAATCAACACTGGAAG
AAGCATCTGAAGCATCAAGTCTCTCATTGCCTTTCCGGAGAATTGCTGTATTTTTAATAT
GTAGAAAATTGATATTGGATTCATCTGTGTGTACGAGCTACATTTTCGTCCATGGAGTGT
AACATTATCCTCCTCTCGTGTGCAAGAGAAGGTTATTTATTCATTGATATTGAGGATGGC
TGATGCTTATGGTCTTG