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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0579700-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:28848050:28850435:-1 gene:Os05g0579700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 10A19I.9. (Os05t0579700-00)
Sequence

ATGGCGTCGGCGGCCGGCTCGAAGCAGCAGCAGGCGATGATGTCGTTGCCGTCGTCCCGC
GGCGGCGGCGGCGGCGGGTGGACGCAGCGGCAGAACAAGCAGTTCGAGTGCGCGCTGGCG
GTGTACGACAAGGAGACGCCGGACCGGTGGCACAACATCGCCCGCTACATGGGCGGCGCC
AAGTCCGCCGACGAGGTCCGCCGCCACTTCGACCACCTCGTCGAGGACGTCTCCCGCATC
GAGTCCGGCCGCGTCCCCTTCCCCCGCTACTCCTCCTCCTCCTCCTCCCGCGGAGCCGAC
GACGGAAACAGATCTAGGTACCTGAAGTATCAGTGA

Peptide Sequence

PEP ID

Os05t0579700-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:28848050:28850435:-1 gene:Os05g0579700 transcript:Os05t0579700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 10A19I.9. (Os05t0579700-00)
Sequence

MASAAGSKQQQAMMSLPSSRGGGGGGWTQRQNKQFECALAVYDKETPDRWHNIARYMGGA
KSADEVRRHFDHLVEDVSRIESGRVPFPRYSSSSSSRGADDGNRSRYLKYQ

Transcript Sequence

Transcript ID

Os05t0579700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:28848050:28850435:-1 gene:Os05g0579700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 10A19I.9. (Os05t0579700-00)
Sequence

AGAGTTAGTTGTTCGCTGATCTGCCACTGAACAAGCCTAATCTACACAATCTACTCCAGT
TGCAGTAGGCAGCTAGCTAGCAGCATTATTATAATGGCGTCGGCGGCCGGCTCGAAGCAG
CAGCAGGCGATGATGTCGTTGCCGTCGTCCCGCGGCGGCGGCGGCGGCGGGTGGACGCAG
CGGCAGAACAAGCAGTTCGAGTGCGCGCTGGCGGTGTACGACAAGGAGACGCCGGACCGG
TGGCACAACATCGCCCGCTACATGGGCGGCGCCAAGTCCGCCGACGAGGTCCGCCGCCAC
TTCGACCACCTCGTCGAGGACGTCTCCCGCATCGAGTCCGGCCGCGTCCCCTTCCCCCGC
TACTCCTCCTCCTCCTCCTCCCGCGGAGCCGACGACGGAAACAGATCTAGGTACCTGAAG
TATCAGTGATGATCACGCTACAGATGACTAGACGTGCAATTCTTTTCCGCGTTCATGAAA
AAAAAACGCTACAGATGACACAGTGATCACGTACGCCGTGCCTCAGCGCCTTCATGACCA
ATATAAACGCATATATATGCATGCAAGTAAATATATATGTACTGTAAATCAAGTATATCA
TGCAAGAAGATATATAAGTCTGGCAAGAAAATGAAGAAGGGCGTCTAACAAGGATCAGAA
CTCCAGTAAAATCGAATTAATGATCGATAGACTAGCTGGTCTGCAATGTTAGCTAAGCTA
CTTTGCATGCATTGTATTCCCTTATAGTCTAATTTCATGTCTTTCATGCATTTGTGTATA
TATAGCTACATTTGTATCCAAGAATCTCCCGGCCGGTGCATTCAGAATGCTTTGTTCGGT
GCTCATATATATATTCACATCGTTTTATTG