Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0579200-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:28829948:28832127:1 gene:Os05g0579200 gene_biotype:protein_coding transcript_biotype:protein_coding description:AMP-dependent synthetase and ligase domain containing protein. (Os05t0579200-01)
Sequence	ATGTCCACCGAGAACTACGACCCGTGCTACCCCGACCAGCCGGTGGTGCACCGGTACCTC CCCGTGTGGGCCAAGCTGCCGGCGTTCGCCGCCAAGCCGGCCTTCGTCTGGGCGGACGAC GGCGACACGGCCATGTCGTACGCAACACTGACATACTCCCAGCTCGACGCCGCCGTCGAA CGCATGTCGTCCGGCCTCCTCGGTGCCCTCCGGCGAGCTGACACCGTCCTCGTGCTGGCC TCGCCGGGCCTCCGCCTCGTCAAGCTCCTCTTCGCGTGCCAGCGAGCGGTGCTCACGGCG GTGCCCATCATACCACCCGACCCCTCCAGGCCCGGCGCCGGCGGCGCCGCGCACTCGCAC CTTCTGCGCGCCGTGTCGCAGACGCGGCCGAGGGCGGCCGTCGCCGACGCCCGATACATT GACGCCATCAAGAAGTCGAATGCCGTCGTCGACGTCGCCGGAGAACCTGATCGGCTCGCC GCCATGTTAAGGAGCCTACGGTGGCTGTCCGTCGACGAGCTGGAGCAAGGAGGTGCCAAT GGAGCGGCGCCGGTGACGCCGTTCGTGGGCGGCGAGCCGGAAGACGCGTACCTGATCCAG TACACCTCCGGCGCGACGGGCGCGCAGAAGCCCGTGGTGATCACGGCGGGCGCGGCGGCG CACAACGCGCGGGCGGCGAGGAGGGCCTACGAACTGCACCCCGGCAGCGTCGTCGTGTCG TGGTTGCCGCAGTACCACGACTGCGGCCTCATGTTCCTCCTCCTCACCGTCGTCGCCGGC GCCACCTGCGTGCTGGCCTCCCCCGACGCCTTCGTCCGCCGCCCGCGCCTCTGGCTCGAG CTCGTCACCGAGTTCAGGGCGACGTGCACGCCCGTGCCATCGTTCGCGCTGCCGCTGGTG CTCAGACGCGGCCGCTCGCCGGACGGGCGGCGGCGGCGGCCTCTCGAGCTCGGCAGCCTG GAGAATCTCATCCTGATAAACGAGCCGATTTACAAGTCGTGCGTCGACGAGTTCGTCGCG GAGTTCCGCGGTGACGGGCTGCTTCCCGCGTCCATCTCGCCGTCGTACGGCCTCGCGGAG AACTGCACGTTCGTGTCCACCGCGTGGCGGAGCCGCCGGTGCGTGGACCTCCCGTCGTAC AAGAAGCTTCTGCCGTCGGCGAGGCTGTCGTTCCACATGGCCGACGAGGAGCCGGAGATC GAGATCATCATGGTGGACGAGGAGACCGGCGAGCCGGTGGAAGACGGCGTGGAGGGGGAG ATCTGGGTGTCCTCGCCGAGCAACGCGTCGGGTTACCTCGGCCACCCGTCGGCGACCCGC GAGGTGTTCTGCGCGACGCTGCCGGGGAAGGGCTCGTGCTACGTGCGCACGGGCGACCGT GGCGTGGTGGTGGTCAGGGGAGCAGAGCGGTATCTCTACGTCGTCGGCCGGAGCGCCGAC GTCCTCGCGCTCGACGTCGACGGCGGCCAGCGCAGCGTGTGCGCGCACTACATTGAGACG GCGGCGTTCGGCGGCGCGCCGGATCGCCTGAGAGGCGGCTGCATTGCTGCCTTCGCCACC TCGCCGGTGCCGTCGACTTCGCTTGTGGTCGTCGTGGCGGAGCTACTGAAGGGAAGCGGC GGCGGCGGCGGCGGCGGCGACCACAAGGATATCTGCGAGGGCATAAAGCGAGCAGTGTGG GAAGAGGAAGGTGTGAGGGTTGGCTGGATCGTGTTGGTCGACAGCGGCGTCGTGCCGAAG ACAACGTCGGGGAAGCTCCGCCGCGGGGCGGCGAGAGAGAAGCTGCTCGCCGGGAAGCTT CCAATTCTCTTGGAAGCACGGTATGACGGAGATGAGAGCTCGAGCTCGGTGCCATGGGAC GGTGGCGAAGAGGAGATGGAGAAGTGTCCTGGCATGGATGCGGCTTATGGGAGTGCAAGC CGCCGTCTGCGTCTGCAGTCGTTTCTTTGA

Peptide Sequence

PEP ID	Os05t0579200-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:28829948:28832127:1 gene:Os05g0579200 transcript:Os05t0579200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:AMP-dependent synthetase and ligase domain containing protein. (Os05t0579200-01)
Sequence	MSTENYDPCYPDQPVVHRYLPVWAKLPAFAAKPAFVWADDGDTAMSYATLTYSQLDAAVE RMSSGLLGALRRADTVLVLASPGLRLVKLLFACQRAVLTAVPIIPPDPSRPGAGGAAHSH LLRAVSQTRPRAAVADARYIDAIKKSNAVVDVAGEPDRLAAMLRSLRWLSVDELEQGGAN GAAPVTPFVGGEPEDAYLIQYTSGATGAQKPVVITAGAAAHNARAARRAYELHPGSVVVS WLPQYHDCGLMFLLLTVVAGATCVLASPDAFVRRPRLWLELVTEFRATCTPVPSFALPLV LRRGRSPDGRRRRPLELGSLENLILINEPIYKSCVDEFVAEFRGDGLLPASISPSYGLAE NCTFVSTAWRSRRCVDLPSYKKLLPSARLSFHMADEEPEIEIIMVDEETGEPVEDGVEGE IWVSSPSNASGYLGHPSATREVFCATLPGKGSCYVRTGDRGVVVVRGAERYLYVVGRSAD VLALDVDGGQRSVCAHYIETAAFGGAPDRLRGGCIAAFATSPVPSTSLVVVVAELLKGSG GGGGGGDHKDICEGIKRAVWEEEGVRVGWIVLVDSGVVPKTTSGKLRRGAAREKLLAGKL PILLEARYDGDESSSSVPWDGGEEEMEKCPGMDAAYGSASRRLRLQSFL

Transcript Sequence

Transcript ID	Os05t0579200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:28829948:28832127:1 gene:Os05g0579200 gene_biotype:protein_coding transcript_biotype:protein_coding description:AMP-dependent synthetase and ligase domain containing protein. (Os05t0579200-01)
Sequence	AAGAGTGACAAGAGAGATTCAGATAGTTTCTCGCTACTCGCTCCCGCCAAGCTAAGTTAG CCACGTACAAACACGGCCATGTCCACCGAGAACTACGACCCGTGCTACCCCGACCAGCCG GTGGTGCACCGGTACCTCCCCGTGTGGGCCAAGCTGCCGGCGTTCGCCGCCAAGCCGGCC TTCGTCTGGGCGGACGACGGCGACACGGCCATGTCGTACGCAACACTGACATACTCCCAG CTCGACGCCGCCGTCGAACGCATGTCGTCCGGCCTCCTCGGTGCCCTCCGGCGAGCTGAC ACCGTCCTCGTGCTGGCCTCGCCGGGCCTCCGCCTCGTCAAGCTCCTCTTCGCGTGCCAG CGAGCGGTGCTCACGGCGGTGCCCATCATACCACCCGACCCCTCCAGGCCCGGCGCCGGC GGCGCCGCGCACTCGCACCTTCTGCGCGCCGTGTCGCAGACGCGGCCGAGGGCGGCCGTC GCCGACGCCCGATACATTGACGCCATCAAGAAGTCGAATGCCGTCGTCGACGTCGCCGGA GAACCTGATCGGCTCGCCGCCATGTTAAGGAGCCTACGGTGGCTGTCCGTCGACGAGCTG GAGCAAGGAGGTGCCAATGGAGCGGCGCCGGTGACGCCGTTCGTGGGCGGCGAGCCGGAA GACGCGTACCTGATCCAGTACACCTCCGGCGCGACGGGCGCGCAGAAGCCCGTGGTGATC ACGGCGGGCGCGGCGGCGCACAACGCGCGGGCGGCGAGGAGGGCCTACGAACTGCACCCC GGCAGCGTCGTCGTGTCGTGGTTGCCGCAGTACCACGACTGCGGCCTCATGTTCCTCCTC CTCACCGTCGTCGCCGGCGCCACCTGCGTGCTGGCCTCCCCCGACGCCTTCGTCCGCCGC CCGCGCCTCTGGCTCGAGCTCGTCACCGAGTTCAGGGCGACGTGCACGCCCGTGCCATCG TTCGCGCTGCCGCTGGTGCTCAGACGCGGCCGCTCGCCGGACGGGCGGCGGCGGCGGCCT CTCGAGCTCGGCAGCCTGGAGAATCTCATCCTGATAAACGAGCCGATTTACAAGTCGTGC GTCGACGAGTTCGTCGCGGAGTTCCGCGGTGACGGGCTGCTTCCCGCGTCCATCTCGCCG TCGTACGGCCTCGCGGAGAACTGCACGTTCGTGTCCACCGCGTGGCGGAGCCGCCGGTGC GTGGACCTCCCGTCGTACAAGAAGCTTCTGCCGTCGGCGAGGCTGTCGTTCCACATGGCC GACGAGGAGCCGGAGATCGAGATCATCATGGTGGACGAGGAGACCGGCGAGCCGGTGGAA GACGGCGTGGAGGGGGAGATCTGGGTGTCCTCGCCGAGCAACGCGTCGGGTTACCTCGGC CACCCGTCGGCGACCCGCGAGGTGTTCTGCGCGACGCTGCCGGGGAAGGGCTCGTGCTAC GTGCGCACGGGCGACCGTGGCGTGGTGGTGGTCAGGGGAGCAGAGCGGTATCTCTACGTC GTCGGCCGGAGCGCCGACGTCCTCGCGCTCGACGTCGACGGCGGCCAGCGCAGCGTGTGC GCGCACTACATTGAGACGGCGGCGTTCGGCGGCGCGCCGGATCGCCTGAGAGGCGGCTGC ATTGCTGCCTTCGCCACCTCGCCGGTGCCGTCGACTTCGCTTGTGGTCGTCGTGGCGGAG CTACTGAAGGGAAGCGGCGGCGGCGGCGGCGGCGGCGACCACAAGGATATCTGCGAGGGC ATAAAGCGAGCAGTGTGGGAAGAGGAAGGTGTGAGGGTTGGCTGGATCGTGTTGGTCGAC AGCGGCGTCGTGCCGAAGACAACGTCGGGGAAGCTCCGCCGCGGGGCGGCGAGAGAGAAG CTGCTCGCCGGGAAGCTTCCAATTCTCTTGGAAGCACGGTATGACGGAGATGAGAGCTCG AGCTCGGTGCCATGGGACGGTGGCGAAGAGGAGATGGAGAAGTGTCCTGGCATGGATGCG GCTTATGGGAGTGCAAGCCGCCGTCTGCGTCTGCAGTCGTTTCTTTGAGTGAACATCAGT GTTGGCTCTTGGCTCCAAGCCTTCCTACTTGGGCATCCTTAATGATTTAGGCCCATATCG ACCATAAGTGGGATGCAATCATTTTATTCATGGCAAATGTTACTGTGTTTTGGATCTCGT CTTTACCTTGAGCTTAGGCC