Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0579000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:28819450:28824329:-1 gene:Os05g0579000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Integral membrane protein. (Os05t0579000-01)
Sequence	ATGAGCTTCCGCGGCGAGGAGAGCGGCGGCGAGGATGGGGGGCGGACGGCGTCGGCGTCG GACCTGCGGAAGCCGTTCCTCCACACGGGGAGCTGGTACAAGATGTCGTCGGCGGGCGGC GGCGGCGGGATGGGGTCGCGCCTCGGCTCCTCCGCCTACTCCCTCCGCGACTCCTCCGTC TCCGCCGTCCTCTGCACCCTCATCGTCGCCCTCGGCCCCATCCAGTTCGGCTTCACCTGC GGCTTCTCCTCGCCCACCCAGGACGCCATCATCTCCGACCTCGGCCTCACCCTCTCCGAG TTCTCGCTGTTCGGGTCGCTGTCGAACGTCGGGGCAATGGTGGGCGCCATCGCCAGCGGC CAGATCGCCGAGTACATCGGCCGCAAGGGGTCTCTCATGATCGCGGCAATTCCTAACATT ATTGGGTGGCTCGCAATATCTTTTGCAAAGGACTCATCCTTTTTGTTTATGGGCCGATTG CTGGAAGGATTTGGGGTCGGCGTGATATCCTATGTGGTGCCAGTTTATATAGCAGAAATT GCTCCACAAACAATGAGAGGAGCTCTTGGTTCAGTCAATCAGCTTTCTGTTACTATTGGC ATATTGCTTGCCTACTTGTTAGGCATGTTTGTTCCCTGGAGAATTCTCTCCGTTCTCGGT ATTTTACCATGTTCAATTCTGATACCTGGATTGTTCTTTATCCCTGAATCACCAAGGTGG CTGGCAAAAATGGGAAAGATGGAGGATTTTGAATCCTCGCTGCAAGTATTGCGAGGATTT GAAACAGACATCGCTGTAGAAGTAAATGAAATAAAGAGAACAGTTCAATCATCACGGAGG AGGACGACAATACGATTTGCAGATATCAAGCAGAAGAGATATAGTGTACCTCTAATGATA GGAATTGGTCTCCTTGTACTGCAGCAGTTAAGTGGTGTGAATGGCATTCTATTTTATGCT GCTAGTATCTTCAAAGCCGCCGGTCTTACGAATAGTAATCTAGCAACATTTGGTCTGGGG GTTGTTCAGGTGGTTGCTACTGGAGTGACAACTTGGTTGACTGACAAAGCTGGTCGACGA CTCCTCCTCATTATCTCTACTACAGGGATGACCATTACTCTTGTTGTTGTTTCTGTGTCA TTTTTTGTGAAGGACAACATAACTAATGGTTCTCATTTATACTCTGTAATGAGTATGCTT TCGCTGGTCGGGCTTGTGGCATTTGTGATTTCATTTTCTCTTGGTTTGGGAGCCATACCA TGGATCATAATGTCTGAGATTCTTCCTGTAAATATCAAGAGCCTTGCTGGAAGCGTTGCA ACCCTTGCAAACTGGTTGACGGCTTGGCTCATTACGATGACAGCAAGCTTGATGTTAAGC TGGAGCAATGGAGGAACATTTGCTATCTATGCTGCTGTGTGTGCCGGGACCCTCGTTTTC GTATGCCTGTGGGTGCCGGAGACTAAAGGAAGAACACTTGAGGAAATTGCATTTTCTTTC CGGTGA

Peptide Sequence

PEP ID	Os05t0579000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:28819450:28824329:-1 gene:Os05g0579000 transcript:Os05t0579000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Integral membrane protein. (Os05t0579000-01)
Sequence	MSFRGEESGGEDGGRTASASDLRKPFLHTGSWYKMSSAGGGGGMGSRLGSSAYSLRDSSV SAVLCTLIVALGPIQFGFTCGFSSPTQDAIISDLGLTLSEFSLFGSLSNVGAMVGAIASG QIAEYIGRKGSLMIAAIPNIIGWLAISFAKDSSFLFMGRLLEGFGVGVISYVVPVYIAEI APQTMRGALGSVNQLSVTIGILLAYLLGMFVPWRILSVLGILPCSILIPGLFFIPESPRW LAKMGKMEDFESSLQVLRGFETDIAVEVNEIKRTVQSSRRRTTIRFADIKQKRYSVPLMI GIGLLVLQQLSGVNGILFYAASIFKAAGLTNSNLATFGLGVVQVVATGVTTWLTDKAGRR LLLIISTTGMTITLVVVSVSFFVKDNITNGSHLYSVMSMLSLVGLVAFVISFSLGLGAIP WIIMSEILPVNIKSLAGSVATLANWLTAWLITMTASLMLSWSNGGTFAIYAAVCAGTLVF VCLWVPETKGRTLEEIAFSFR

Transcript Sequence

Transcript ID	Os05t0579000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:28819450:28824329:-1 gene:Os05g0579000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Integral membrane protein. (Os05t0579000-01)
Sequence	TACCACTCGCTCTTCCCCTCAATCAATCAAGCTTAAGCTAAGCTGGGCGCGACAGCGAGA GAGAAACGAGGGATCGATCGCGTCCACGCACGCCCGATCCCGGCCGCGAGATGAGCTTCC GCGGCGAGGAGAGCGGCGGCGAGGATGGGGGGCGGACGGCGTCGGCGTCGGACCTGCGGA AGCCGTTCCTCCACACGGGGAGCTGGTACAAGATGTCGTCGGCGGGCGGCGGCGGCGGGA TGGGGTCGCGCCTCGGCTCCTCCGCCTACTCCCTCCGCGACTCCTCCGTCTCCGCCGTCC TCTGCACCCTCATCGTCGCCCTCGGCCCCATCCAGTTCGGCTTCACCTGCGGCTTCTCCT CGCCCACCCAGGACGCCATCATCTCCGACCTCGGCCTCACCCTCTCCGAGTTCTCGCTGT TCGGGTCGCTGTCGAACGTCGGGGCAATGGTGGGCGCCATCGCCAGCGGCCAGATCGCCG AGTACATCGGCCGCAAGGGGTCTCTCATGATCGCGGCAATTCCTAACATTATTGGGTGGC TCGCAATATCTTTTGCAAAGGACTCATCCTTTTTGTTTATGGGCCGATTGCTGGAAGGAT TTGGGGTCGGCGTGATATCCTATGTGGTGCCAGTTTATATAGCAGAAATTGCTCCACAAA CAATGAGAGGAGCTCTTGGTTCAGTCAATCAGCTTTCTGTTACTATTGGCATATTGCTTG CCTACTTGTTAGGCATGTTTGTTCCCTGGAGAATTCTCTCCGTTCTCGGTATTTTACCAT GTTCAATTCTGATACCTGGATTGTTCTTTATCCCTGAATCACCAAGGTGGCTGGCAAAAA TGGGAAAGATGGAGGATTTTGAATCCTCGCTGCAAGTATTGCGAGGATTTGAAACAGACA TCGCTGTAGAAGTAAATGAAATAAAGAGAACAGTTCAATCATCACGGAGGAGGACGACAA TACGATTTGCAGATATCAAGCAGAAGAGATATAGTGTACCTCTAATGATAGGAATTGGTC TCCTTGTACTGCAGCAGTTAAGTGGTGTGAATGGCATTCTATTTTATGCTGCTAGTATCT TCAAAGCCGCCGGTCTTACGAATAGTAATCTAGCAACATTTGGTCTGGGGGTTGTTCAGG TGGTTGCTACTGGAGTGACAACTTGGTTGACTGACAAAGCTGGTCGACGACTCCTCCTCA TTATCTCTACTACAGGGATGACCATTACTCTTGTTGTTGTTTCTGTGTCATTTTTTGTGA AGGACAACATAACTAATGGTTCTCATTTATACTCTGTAATGAGTATGCTTTCGCTGGTCG GGCTTGTGGCATTTGTGATTTCATTTTCTCTTGGTTTGGGAGCCATACCATGGATCATAA TGTCTGAGATTCTTCCTGTAAATATCAAGAGCCTTGCTGGAAGCGTTGCAACCCTTGCAA ACTGGTTGACGGCTTGGCTCATTACGATGACAGCAAGCTTGATGTTAAGCTGGAGCAATG GAGGAACATTTGCTATCTATGCTGCTGTGTGTGCCGGGACCCTCGTTTTCGTATGCCTGT GGGTGCCGGAGACTAAAGGAAGAACACTTGAGGAAATTGCATTTTCTTTCCGGTGAAGCT CAGGCCAACGTTGTCTGGCGATCAGCCTGGTGCACGTCAGTCGGCAACAGATTTGGCTCC GTGAGCTATCGGATTAGGCATCAAGATTTGAATTCTTGAGTTCATGTGTATCTAAGGCAA GCGTGTATTGGTTGCATTTGTAATTTTGTATCATGTGTTCATGTATGTGCAATAGAAATA TAGAATGGAGCAGTAGCAAGAGACAATATAATGGACCATTGCAAGTTGTCACGCACGCCA TGTGGATGGATGGAACAATGAAGATGCCAATATGTCATGCCGTATGATGAATTTTGAGCA AATATATAGCTGAGGGTTGTTAGT