Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0578600-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:28802278:28804210:-1 gene:Os05g0578600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Polygalacturonase PG2. (Os05t0578600-01)
Sequence	AGTGGAATATCAATTCAAGGAAGTGGTGTCATAAATGGTAGGGGGCAAGAATGGTGGACC TATTCAGATCCAAATGACGACGACAATGATGATGTTGATGCTTACAATGTGGAGCTGGAG AAGATGCCACAGATTAAACCTACAGCATTGAGGTTTTATGGTAGTTCCAATGTCACAGTA ACTGGTATCACCATTGTTAACAGCTCACAGTGCCATCTCAAGTTTGATAGCTGTCAAGGA GTAATGGTTCATGACCTGACCATCTCATCGCCTGAGAACAGTCCCAACACTGATGGAATA CACCTGCAAAATTCCAAACAAGTCAGCATTCACCACTCTAACCTCGCTTGCGGCGATGAT TGTGTTTCCATCCAGACAGGCTGCAGTGACATAAACATACATAATGTGAACTGTGGACCA GGGCATGGGATCAGCATTGGTGGTCTAGGAAGGTACAACACAAAAGCATGTGTATCCAAT GTCACCGTAAGAGATGTCAACATGTTCAAAACAATGACTGGTGTCAGAATCAAAACTTGG CAGGGAGGTTCAGGGTTGGTTCAAGGCATAAGGTTCTCAAACATACAAGTGTCAGAAGTT CAAACACCTATCATAATAGACCAATTTTACTGTGACAGAACAACTTGCAGAAACCAAACA TCAGCAGTGGCGGTTTTAGGTGTTCAGTACGAGAATATCAGGGGGACCTTCACAATCAAG CCTGCCCATTTTGCATGCAGTGATAGCTCGCCTTGTTCAGAGATCACTCTTACTGGAATA CAGCTCAAACCCCTGATAGTGCCACAGTATCACCTGTACAACCCATTCTGCTGGCAAGCC TTTGGAGAGTTGTCCACCCCCACCATCCCTCCCATATCCTGCTTGCAGATCGGCAAACCA TCTGGGAACAACGTGATGTCAGATTATGATCTATGTTGA

Peptide Sequence

PEP ID	Os05t0578600-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:28802278:28804210:-1 gene:Os05g0578600 transcript:Os05t0578600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Polygalacturonase PG2. (Os05t0578600-01)
Sequence	SGISIQGSGVINGRGQEWWTYSDPNDDDNDDVDAYNVELEKMPQIKPTALRFYGSSNVTV TGITIVNSSQCHLKFDSCQGVMVHDLTISSPENSPNTDGIHLQNSKQVSIHHSNLACGDD CVSIQTGCSDINIHNVNCGPGHGISIGGLGRYNTKACVSNVTVRDVNMFKTMTGVRIKTW QGGSGLVQGIRFSNIQVSEVQTPIIIDQFYCDRTTCRNQTSAVAVLGVQYENIRGTFTIK PAHFACSDSSPCSEITLTGIQLKPLIVPQYHLYNPFCWQAFGELSTPTIPPISCLQIGKP SGNNVMSDYDLC

Transcript Sequence

Transcript ID	Os05t0578600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:28802278:28804210:-1 gene:Os05g0578600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Polygalacturonase PG2. (Os05t0578600-01)
Sequence	TAGTGGAATATCAATTCAAGGAAGTGGTGTCATAAATGGTAGGGGGCAAGAATGGTGGAC CTATTCAGATCCAAATGACGACGACAATGATGATGTTGATGCTTACAATGTGGAGCTGGA GAAGATGCCACAGATTAAACCTACAGCATTGAGGTTTTATGGTAGTTCCAATGTCACAGT AACTGGTATCACCATTGTTAACAGCTCACAGTGCCATCTCAAGTTTGATAGCTGTCAAGG AGTAATGGTTCATGACCTGACCATCTCATCGCCTGAGAACAGTCCCAACACTGATGGAAT ACACCTGCAAAATTCCAAACAAGTCAGCATTCACCACTCTAACCTCGCTTGCGGCGATGA TTGTGTTTCCATCCAGACAGGCTGCAGTGACATAAACATACATAATGTGAACTGTGGACC AGGGCATGGGATCAGCATTGGTGGTCTAGGAAGGTACAACACAAAAGCATGTGTATCCAA TGTCACCGTAAGAGATGTCAACATGTTCAAAACAATGACTGGTGTCAGAATCAAAACTTG GCAGGGAGGTTCAGGGTTGGTTCAAGGCATAAGGTTCTCAAACATACAAGTGTCAGAAGT TCAAACACCTATCATAATAGACCAATTTTACTGTGACAGAACAACTTGCAGAAACCAAAC ATCAGCAGTGGCGGTTTTAGGTGTTCAGTACGAGAATATCAGGGGGACCTTCACAATCAA GCCTGCCCATTTTGCATGCAGTGATAGCTCGCCTTGTTCAGAGATCACTCTTACTGGAAT ACAGCTCAAACCCCTGATAGTGCCACAGTATCACCTGTACAACCCATTCTGCTGGCAAGC CTTTGGAGAGTTGTCCACCCCCACCATCCCTCCCATATCCTGCTTGCAGATCGGCAAACC ATCTGGGAACAACGTGATGTCAGATTATGATCTATGTTGAAACTCTCTGAATGAGTGGAA ATGCTGTGATCCAGGAAATACTATACTCCTGGTCCTCATTGGTTAGGGTGGTCGTCGTGA TTCTTCCGACCCCCTTTCTGCACAATCATCGTGTGGTGTATATATATACAGTTTATGCAA GGATAGTATATGGTTATCAGGACATGTACCAGCTTCCCTCTTGAAGTGAAATGTAGGAAT TTGAT