Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0577100-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:28743711:28744604:-1 gene:Os05g0577100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF617, plant family protein. (Os05t0577100-00)
Sequence

ATGAGAACCATCACAGCAAGAAACCCCCATGATTCCCTCTCCTTCTCTAGGAGGCATTTC
AAGTGGCCGGTTCTTGGCAAGAGCTACAGCCATGGCGCCACGAGAGGGGAGGAGGATTAC
ATGAAGAGCTCGGAAGCTGAAGAGGAGGAGGATGAGGCGACAATGGCGTTCTCCTCTGTC
TGTCCGAGTTTCCATTCTGAGGACTTCGTTTCTCCTCCCAAGAAGCCGCCGCGGCAGCAG
CATCCTCAGCAGCAGCATCCGCCGCAGCGTAGGAAGGTCCGCACGGCCGTGTCGCGCCTG
CGCTCGGCGCTGGCGGCGGCCGTGACGGGGCGGCACCGGCAGGTCGGCCTCGGCGCGCGG
CTCACCGGCACGCTCTACGGCCACCGGCGCGGCCACGTGCACCTCGCGTTCCAGCTCGAC
CCGCGCGCGTGCCCGGCGCTGCTGCTGGAGCTCGCCGCGCCCACCGCCGCGCTGGTGCGC
GAGATGGCCTCGGGCCTTGTGCGCATCGCGCTCGAGTGCGAGCGCGCCAAGGGCGGCCCC
GCCCCCGCCCTGCCCACCGCGACGGGCGGCGGGAAGAGGCTGCTCGAGGAGACGGTGTGG
CGCGCGTACTGCAACGGCAAGAGCTGCGGCTACGCGGTGCGCCGCGAGTGCGGCGCCGCC
GACTGGCGCGTGCTGCGCGCGCTGGAGCCGGTGTCCATGGGCGCCGGCGTCATACCCGCC
GCCAGCTGCGGCGGCGGCGAGGGCGACGTCATGTACATGCGCGCGCGGTTCGAGCGGGTG
GTGGGCTCGCGCGACTCGGAGGCATTCTACATGATGAACCCGGACAGCACAAGCACCAGC
AGCAACAGCAACAGTGGCGGTCCTGAGCTCAGTGTCTACCTCCTCCGGGTTTAA

Peptide Sequence

PEP ID

Os05t0577100-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:28743711:28744604:-1 gene:Os05g0577100 transcript:Os05t0577100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF617, plant family protein. (Os05t0577100-00)
Sequence

MRTITARNPHDSLSFSRRHFKWPVLGKSYSHGATRGEEDYMKSSEAEEEEDEATMAFSSV
CPSFHSEDFVSPPKKPPRQQHPQQQHPPQRRKVRTAVSRLRSALAAAVTGRHRQVGLGAR
LTGTLYGHRRGHVHLAFQLDPRACPALLLELAAPTAALVREMASGLVRIALECERAKGGP
APALPTATGGGKRLLEETVWRAYCNGKSCGYAVRRECGAADWRVLRALEPVSMGAGVIPA
ASCGGGEGDVMYMRARFERVVGSRDSEAFYMMNPDSTSTSSNSNSGGPELSVYLLRV

Transcript Sequence

Transcript ID

Os05t0577100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:28743711:28744604:-1 gene:Os05g0577100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF617, plant family protein. (Os05t0577100-00)
Sequence

ATGAGAACCATCACAGCAAGAAACCCCCATGATTCCCTCTCCTTCTCTAGGAGGCATTTC
AAGTGGCCGGTTCTTGGCAAGAGCTACAGCCATGGCGCCACGAGAGGGGAGGAGGATTAC
ATGAAGAGCTCGGAAGCTGAAGAGGAGGAGGATGAGGCGACAATGGCGTTCTCCTCTGTC
TGTCCGAGTTTCCATTCTGAGGACTTCGTTTCTCCTCCCAAGAAGCCGCCGCGGCAGCAG
CATCCTCAGCAGCAGCATCCGCCGCAGCGTAGGAAGGTCCGCACGGCCGTGTCGCGCCTG
CGCTCGGCGCTGGCGGCGGCCGTGACGGGGCGGCACCGGCAGGTCGGCCTCGGCGCGCGG
CTCACCGGCACGCTCTACGGCCACCGGCGCGGCCACGTGCACCTCGCGTTCCAGCTCGAC
CCGCGCGCGTGCCCGGCGCTGCTGCTGGAGCTCGCCGCGCCCACCGCCGCGCTGGTGCGC
GAGATGGCCTCGGGCCTTGTGCGCATCGCGCTCGAGTGCGAGCGCGCCAAGGGCGGCCCC
GCCCCCGCCCTGCCCACCGCGACGGGCGGCGGGAAGAGGCTGCTCGAGGAGACGGTGTGG
CGCGCGTACTGCAACGGCAAGAGCTGCGGCTACGCGGTGCGCCGCGAGTGCGGCGCCGCC
GACTGGCGCGTGCTGCGCGCGCTGGAGCCGGTGTCCATGGGCGCCGGCGTCATACCCGCC
GCCAGCTGCGGCGGCGGCGAGGGCGACGTCATGTACATGCGCGCGCGGTTCGAGCGGGTG
GTGGGCTCGCGCGACTCGGAGGCATTCTACATGATGAACCCGGACAGCACAAGCACCAGC
AGCAACAGCAACAGTGGCGGTCCTGAGCTCAGTGTCTACCTCCTCCGGGTTTAA