Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0576900-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:28735044:28737929:-1 gene:Os05g0576900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN PROTEIN 10B description:Similar to PIN1-like auxin transport protein. (Os05t0576900-01)
Sequence	ATGATATCGTGGCACGAGCTGTACATGGTGCTGTCGGCGGTGGTGCCGCTGTACGTGGCG ATGATGGTGGCGTACGGCTCCGTGCGGTGGTGGGGCGTCCTCACGCCGGAGCAGTGCTCC GGCATCAACCGCTTCGTCGCCGTCATCGCCGTCCCGCTCCTCTCCTTCCACTTCATCTCC TCCAGCGACCCCTACGCCATGAACCTCCGCTTCGTCGCCGCCGACACCCTGCAGAAGGTG CTCGTCCTCGCCGCGCTCGCCGCGTGGTCGCGCTTCCCCGCGCGCTTCGTCCCCCCGGCG TGGCCGCCGCTCGACTGCTCCATCACGCTCTTCTCCGTCTCCACCCTCCCCAACACGCTC GTCATGGGGATCCCGCTCCTCGTCTCCATGTACGGCCCTTACTCCGGCGACCTCATGGTC CAGATCGTCGTGCTCCAGTCCATCGTCTGGTACACGCTCCTGCTCTTCCTCTTCGAGTTC CGCGCCGCGCGGGTGCTCATCGCGGCGCAGTTCCCGGACACCGCGGCGTCCATCGCCGCC GTGCACGTCGACCCGGACGTGGTGTCGCTCGAGGGCAGCCAGGCGGAGGCGCACGCCGAG GTGGCGCCCGACGGGAGGCTGCGCATGGTCGTGTGCCGCTCGTCGGTGTCGAGGCGGTCC GCCGCCGCCGCCGCCACGCCGCGCGCGTCGAACCTGACCGGCGTGGAGATCTACTCGATC AGCTCGTCGCGGAACGCCACCCCGAGGGGCTCCACCTTCACCCTCGCCGACATCCCTGGT CACCAGCCGCCCAACAGCGCGCTGCGCGCGTCCAGCTTCGGCGCCGCGGACCTCTTCTCG CTGCACTCTTCGTCGAGGCAGCACACCCCGAGGCCGTCCAGCTTCGACGAGCACGCGGCG GCGCGGGCCAGAGCATCCGCGACCGTGGCTCCCACCAATGACCTCAAGGACACGCACATG ATCGAGTGGAGCTCCGGCGCTTCCGCCGCGTCGGAGGTCACCGGCCTGCCGGTGTTCCGC AGCGGCCGGGAGACGCGCCGGCTTGTCCCCTCCGACGCGCCATCCATTGCCTCGTCGAGA GTTATCCGACCGCCGCCGGGAGCGACGGGCGGGGAGCGCGCGGCGAGCTTCAACAAGGCC GTGGGCGGGCAGGACGAGCTAGCGAAGCTGGAGGCCGGCGCCAAGACGGAGCAGCAGACG ACGGCGGTGACTACGACGACGAAGGGCGGCGGCGCAGCGGGCGCGGAGCGGGCGAGAGGG CAGCAGAACGCGCCGGCCGGCGTGATGCTGCGGCTCATCCTCACTACGGTTTGGCGCCGG CTGATCCGGAACCCCAACACGTACGCCAGCCTCATCGGCCTCACCTGGTCGCTCATCGCG TTCCGGTTCCACATCACGATGCCAATCATAGTAGCCAAATCAATCTCCATTCTCTCCGAT GCAGGGTTAGGCATGGCCATGTTTAGCTTAGGATTGTTCATGGCCACGCAGCCGAAGATC ATCGCCTGCGGCTACTCCGTCGCGGCGGCCAGCATGGGCGTCCGCTTCTTCTTCGGCCCC GCCATCATGGCCGCCGCGTCCGCCGCCGTCGGCATCCGAGGCACGCTCTTGCGTATCGCC ATTGTTCAGGCCGCCCTGCCACAAGGAATTGTGCCATTTGTGTTCGCTAAGGAATACAAC CTCCACGCTACCATCCTTTGCACTTTGGTCATATTTGGCATGCTAATAGCTCTCCCCATC ACCTTGGTCTACTATATTATTCTTGGGCTACTATGA

Peptide Sequence

PEP ID	Os05t0576900-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:28735044:28737929:-1 gene:Os05g0576900 transcript:Os05t0576900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN PROTEIN 10B description:Similar to PIN1-like auxin transport protein. (Os05t0576900-01)
Sequence	MISWHELYMVLSAVVPLYVAMMVAYGSVRWWGVLTPEQCSGINRFVAVIAVPLLSFHFIS SSDPYAMNLRFVAADTLQKVLVLAALAAWSRFPARFVPPAWPPLDCSITLFSVSTLPNTL VMGIPLLVSMYGPYSGDLMVQIVVLQSIVWYTLLLFLFEFRAARVLIAAQFPDTAASIAA VHVDPDVVSLEGSQAEAHAEVAPDGRLRMVVCRSSVSRRSAAAAATPRASNLTGVEIYSI SSSRNATPRGSTFTLADIPGHQPPNSALRASSFGAADLFSLHSSSRQHTPRPSSFDEHAA ARARASATVAPTNDLKDTHMIEWSSGASAASEVTGLPVFRSGRETRRLVPSDAPSIASSR VIRPPPGATGGERAASFNKAVGGQDELAKLEAGAKTEQQTTAVTTTTKGGGAAGAERARG QQNAPAGVMLRLILTTVWRRLIRNPNTYASLIGLTWSLIAFRFHITMPIIVAKSISILSD AGLGMAMFSLGLFMATQPKIIACGYSVAAASMGVRFFFGPAIMAAASAAVGIRGTLLRIA IVQAALPQGIVPFVFAKEYNLHATILCTLVIFGMLIALPITLVYYIILGLL

Transcript Sequence

Transcript ID	Os05t0576900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:28735044:28737929:-1 gene:Os05g0576900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN PROTEIN 10B description:Similar to PIN1-like auxin transport protein. (Os05t0576900-01)
Sequence	ACTCACTCTCTGCATGTAACAGCAACACACTAATCGCACGCTGCTCCTCTCGATCGCATC GCAGGAAACAGATCGATCAGCTGCTCCCAGACCGGCGATCGGCCGCCGCCGCCATGATAT CGTGGCACGAGCTGTACATGGTGCTGTCGGCGGTGGTGCCGCTGTACGTGGCGATGATGG TGGCGTACGGCTCCGTGCGGTGGTGGGGCGTCCTCACGCCGGAGCAGTGCTCCGGCATCA ACCGCTTCGTCGCCGTCATCGCCGTCCCGCTCCTCTCCTTCCACTTCATCTCCTCCAGCG ACCCCTACGCCATGAACCTCCGCTTCGTCGCCGCCGACACCCTGCAGAAGGTGCTCGTCC TCGCCGCGCTCGCCGCGTGGTCGCGCTTCCCCGCGCGCTTCGTCCCCCCGGCGTGGCCGC CGCTCGACTGCTCCATCACGCTCTTCTCCGTCTCCACCCTCCCCAACACGCTCGTCATGG GGATCCCGCTCCTCGTCTCCATGTACGGCCCTTACTCCGGCGACCTCATGGTCCAGATCG TCGTGCTCCAGTCCATCGTCTGGTACACGCTCCTGCTCTTCCTCTTCGAGTTCCGCGCCG CGCGGGTGCTCATCGCGGCGCAGTTCCCGGACACCGCGGCGTCCATCGCCGCCGTGCACG TCGACCCGGACGTGGTGTCGCTCGAGGGCAGCCAGGCGGAGGCGCACGCCGAGGTGGCGC CCGACGGGAGGCTGCGCATGGTCGTGTGCCGCTCGTCGGTGTCGAGGCGGTCCGCCGCCG CCGCCGCCACGCCGCGCGCGTCGAACCTGACCGGCGTGGAGATCTACTCGATCAGCTCGT CGCGGAACGCCACCCCGAGGGGCTCCACCTTCACCCTCGCCGACATCCCTGGTCACCAGC CGCCCAACAGCGCGCTGCGCGCGTCCAGCTTCGGCGCCGCGGACCTCTTCTCGCTGCACT CTTCGTCGAGGCAGCACACCCCGAGGCCGTCCAGCTTCGACGAGCACGCGGCGGCGCGGG CCAGAGCATCCGCGACCGTGGCTCCCACCAATGACCTCAAGGACACGCACATGATCGAGT GGAGCTCCGGCGCTTCCGCCGCGTCGGAGGTCACCGGCCTGCCGGTGTTCCGCAGCGGCC GGGAGACGCGCCGGCTTGTCCCCTCCGACGCGCCATCCATTGCCTCGTCGAGAGTTATCC GACCGCCGCCGGGAGCGACGGGCGGGGAGCGCGCGGCGAGCTTCAACAAGGCCGTGGGCG GGCAGGACGAGCTAGCGAAGCTGGAGGCCGGCGCCAAGACGGAGCAGCAGACGACGGCGG TGACTACGACGACGAAGGGCGGCGGCGCAGCGGGCGCGGAGCGGGCGAGAGGGCAGCAGA ACGCGCCGGCCGGCGTGATGCTGCGGCTCATCCTCACTACGGTTTGGCGCCGGCTGATCC GGAACCCCAACACGTACGCCAGCCTCATCGGCCTCACCTGGTCGCTCATCGCGTTCCGGT TCCACATCACGATGCCAATCATAGTAGCCAAATCAATCTCCATTCTCTCCGATGCAGGGT TAGGCATGGCCATGTTTAGCTTAGGATTGTTCATGGCCACGCAGCCGAAGATCATCGCCT GCGGCTACTCCGTCGCGGCGGCCAGCATGGGCGTCCGCTTCTTCTTCGGCCCCGCCATCA TGGCCGCCGCGTCCGCCGCCGTCGGCATCCGAGGCACGCTCTTGCGTATCGCCATTGTTC AGGCCGCCCTGCCACAAGGAATTGTGCCATTTGTGTTCGCTAAGGAATACAACCTCCACG CTACCATCCTTTGCACTTTGGTCATATTTGGCATGCTAATAGCTCTCCCCATCACCTTGG TCTACTATATTATTCTTGGGCTACTATGAACTGATCAGGAACGGTAGTACAAAATCTTAC ACATGGCAAAGATCCGGATGGTGCAGAACCGTGGATGGACGACACATGTTCTAACTTGCA GCTGCTAACTTAGCATTGCTCAATGGAACTCCTTGGCTGAGAGCGGTAGATTTGAAGAGC TTACCATCTGATTGTTGCCGACTGCTGGACCAATGGAATAACTTAAGCGAAAACAACAGC TGAATCAATGTTTTTTTTTTGACTGAGCTGAATCAATGTTTTAGTTGTTCACTGCACATA TCTCTTTCCGTGTTCTTCTGATTCGATCCTTGCAGACCTTTTTTTTTTTTTGGCCATTTG TAGTCTCGACTCTCAACAGAGGATTTTTGTAACTAGGGATTCCCCGCGCTTTGCTTCGGG AATTACTAAGTAATTTTCAATATTATTTTTTCGTTACAATTC