Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0576600-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:28710320:28711241:-1 gene:Os05g0576600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0576600-01)
Sequence

ATGGAGGTGGAGGCGTTCCCGATACGGTTCACGAGGGGAATACGGTCGCACTGGGGGAGG
CGCAAGTACCAGCGGCTGGAGGCGGCGAACGGCGGCGGGAAGACGAGGGCGACGCAGCAG
CTGGGCGGCGCGCGCCGCGGCGGTGCGGGGTGGGGGCTGCGGCTGCGGCGGCTGCTCCGC
GTCCGCGTGCGCGTGGCGAGGGCGTGGCTGTCGTCCCCGGCGCGGCTGCTGGCGCGGATC
CGCGACGCGTACGTGGGCGGCATGCTCGCCGTGTCGAGGAAGGCGTCGGGCATGTCGCTG
CCGAACGCGCCCGAGGGGCTGTGGCCCAGGCGCGTGCCGCGCCGGAAGCAGCTCCCGGCG
GCGCGGCCAGGCCAGCTCACCGACTTCGAGCAGAGGCTCGTCGTCGAGATATACAAGTCC
ATCGTCGCCTCCAAGGAGCTCACCACCATGCTCCACCACTCCACCGCGCACCTGCCGCAG
CAGCACAACACGGCGGCGCCGGCGTCCAGTGGCCAGCTGCTAGTCAATTAG

Peptide Sequence

PEP ID

Os05t0576600-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:28710320:28711241:-1 gene:Os05g0576600 transcript:Os05t0576600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0576600-01)
Sequence

MEVEAFPIRFTRGIRSHWGRRKYQRLEAANGGGKTRATQQLGGARRGGAGWGLRLRRLLR
VRVRVARAWLSSPARLLARIRDAYVGGMLAVSRKASGMSLPNAPEGLWPRRVPRRKQLPA
ARPGQLTDFEQRLVVEIYKSIVASKELTTMLHHSTAHLPQQHNTAAPASSGQLLVN

Transcript Sequence

Transcript ID

Os05t0576600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:28710320:28711241:-1 gene:Os05g0576600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0576600-01)
Sequence

AACCAAACCCAAAAACCCAAACCAAACGCGCGACGCCTCAGCTTTCTCCTGCTCCTCCTG
CCACTCACCAACCCAACGCAAAGCATCGCGGCCGCGAGGTCGTCGACCTCGTCGTCGTCG
TCGATGGAGGTGGAGGCGTTCCCGATACGGTTCACGAGGGGAATACGGTCGCACTGGGGG
AGGCGCAAGTACCAGCGGCTGGAGGCGGCGAACGGCGGCGGGAAGACGAGGGCGACGCAG
CAGCTGGGCGGCGCGCGCCGCGGCGGTGCGGGGTGGGGGCTGCGGCTGCGGCGGCTGCTC
CGCGTCCGCGTGCGCGTGGCGAGGGCGTGGCTGTCGTCCCCGGCGCGGCTGCTGGCGCGG
ATCCGCGACGCGTACGTGGGCGGCATGCTCGCCGTGTCGAGGAAGGCGTCGGGCATGTCG
CTGCCGAACGCGCCCGAGGGGCTGTGGCCCAGGCGCGTGCCGCGCCGGAAGCAGCTCCCG
GCGGCGCGGCCAGGCCAGCTCACCGACTTCGAGCAGAGGCTCGTCGTCGAGATATACAAG
TCCATCGTCGCCTCCAAGGAGCTCACCACCATGCTCCACCACTCCACCGCGCACCTGCCG
CAGCAGCACAACACGGCGGCGCCGGCGTCCAGTGGCCAGCTGCTAGTCAATTAGCGTGCT
GTCTGTATCCACCATCGACATGGAAACTGAACCGCGAGAGCTCCTGCAAGTTCGTTTGCT
CGATCGCTGCTCATGTTGATGATTATTACTACTGCTGTTTCTTCCTTGTAATTTGTAAGA
AGTATTAGTTAGGACAAGATGATGATGTACACTTCAATTTCTACCTGGTGCAAATCACCA
TGCCGCCGCGAGTATGTTTAATTTCGTAACCAAGAAATCGATCAAGCAAAGTTCGTGCCT
CCGCGCACCTTGTTCTTGTTCT