Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0575300-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:28656123:28661349:1 gene:Os05g0575300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Translation initiation factor IF-2. (Os05t0575300-01);Similar to Translation initiation factor IF-2, chloroplast precursor (PvIF2cp). (Os05t0575300-02)
Sequence	GAAGTACTGGAAAGTGGTCCAGTGAAAGTGGAAGAGATGGCAAAGAAGAAGGAATTTCTT GACGAGGAAGATTTGGACAAGTTGGAAGACAGACCCCCTATTGTAACTATCATGGGCCAT GTCGATCATGGAAAGACTACCCTGTTGGATTATATACGCAAGAGCAAGGTGGTGGCATCT GAGGCTGGCGGAATAACACAAGGGATTGGTGCCTATCAGGTTATTGTACAGGTTGATGGA AACCCTCATGCTTGTGTTTTTCTTGATACTCCAGGGCACGAGGCATTTGGTGCAATGAGA GCTCGGGGTGCTAGGGTAACTGATATCTGTATCATTGTTGTCTCTGCGGATGATGGTGTT CGTCCACAAACAAATGAGGCAATTGCACATGCAAAGGCAGCTGGAGTCCCTATTGTGATA GCCATAAACAAGATAGACAAGGAAGGAGCTAATGCTGAACGGGTCATGCAAGAGCTTTCC CAAATTGGACTTATGCCAGAGGCGTGGGGTGGTGATATCCCAATGATTCAGATAAGTGCT CTTAATGGAGAGGGTGTAGATGAACTATTGGAGACTATCATTCTTGTTGCTGAGCTGCAA GAATTAAAGGCCAATCCTCATAGAAATGCAAAGGGTACAGTTATTGAAGCATGCCTTGAC AAAGCTAAAGGATCTCTTGCCACCCTAGTTGTACAGAATGGAACCCTAAACAAGGGTGAT ATTGTTGTGTGTGGTGAGGCTTTTGGAAAGATCCGTGCAATGTATGATGATGGTGGAAAG CTTATCGATAAGGCTGGGCCATCCAATGCCGTGCAGGTTATTGGCTTGAATAATGTACCC CTTGCTGGTGATGAATTTGAGTCTGTGGACAACCTTGATGTTGCACGTGAAAGGGCAAAC GCACGTGCTGAAGCACTGAGAATTGAAAGGATATCTTCGAAAGCTGGGGAAGGGAAAGTC ACTCTGTCATCCATTGCTGCATCTGTTTCATCTGGAAAACAAGTAGGAATTGATACACAC GAGCTTAATATCATCCTTAAAGTTGATTTTCAGGGTTCAGTTGAGGCCATTAGGCAAGCA ATCCAAGTGCTGCCTCAAGAAAATGTCTCCTTGAGGTTCCTACTTCAAGCTCCGGGAGAT GTGAGTGTCAGTGATGTTGATCTGGCTGTTGCTTCAGAAGGGATTATATTTGGTTTTAAT GTCAAAGCTCCAGGATCAGTTAAAAGCTATGCTAAGAAGAAAAGTGTGGAAATTCGTCTG TACAAGGTGATCTATGATTTGATTGATGATTTGCGGAATGCCATGGAAGGACTTCTTGAA CTTGCTGAGGAGGAAGTACCAATTGGTTCAGCCAAAGTTCGTGCTGTTTTTAGTAGTGGC AGTGGCAAGGTGGCGGGTTGCATGATTACTACTGGGAAAGTTGTTCATGACTGCAATGTT CGGGTTCTTCGTAAAGGGAAAGAAGTTTATATGGGTACACTTGATTCGTTAAGACGGGTG AAAGAAACTGTAAAGGAGGTTGGTGCTGGGCTAGAGTGTGGCATTGGGGTAGATGATTTT GACGAATGGGAGGAAGGTGATGTCGTGGAGGCATTCAACACAGTTAAGAAGACAAGAACC CTAGAGGAAGCCTCTGCTTCTGTGACTGCTGCTCTAAAGGATGCCGGCGTCCAGCTGTAG

Peptide Sequence

PEP ID	Os05t0575300-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:28656123:28661349:1 gene:Os05g0575300 transcript:Os05t0575300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Translation initiation factor IF-2. (Os05t0575300-01);Similar to Translation initiation factor IF-2, chloroplast precursor (PvIF2cp). (Os05t0575300-02)
Sequence	EVLESGPVKVEEMAKKKEFLDEEDLDKLEDRPPIVTIMGHVDHGKTTLLDYIRKSKVVAS EAGGITQGIGAYQVIVQVDGNPHACVFLDTPGHEAFGAMRARGARVTDICIIVVSADDGV RPQTNEAIAHAKAAGVPIVIAINKIDKEGANAERVMQELSQIGLMPEAWGGDIPMIQISA LNGEGVDELLETIILVAELQELKANPHRNAKGTVIEACLDKAKGSLATLVVQNGTLNKGD IVVCGEAFGKIRAMYDDGGKLIDKAGPSNAVQVIGLNNVPLAGDEFESVDNLDVARERAN ARAEALRIERISSKAGEGKVTLSSIAASVSSGKQVGIDTHELNIILKVDFQGSVEAIRQA IQVLPQENVSLRFLLQAPGDVSVSDVDLAVASEGIIFGFNVKAPGSVKSYAKKKSVEIRL YKVIYDLIDDLRNAMEGLLELAEEEVPIGSAKVRAVFSSGSGKVAGCMITTGKVVHDCNV RVLRKGKEVYMGTLDSLRRVKETVKEVGAGLECGIGVDDFDEWEEGDVVEAFNTVKKTRT LEEASASVTAALKDAGVQL

Transcript Sequence

Transcript ID	Os05t0575300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:28656123:28661349:1 gene:Os05g0575300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Translation initiation factor IF-2. (Os05t0575300-01);Similar to Translation initiation factor IF-2, chloroplast precursor (PvIF2cp). (Os05t0575300-02)
Sequence	GAAGTACTGGAAAGTGGTCCAGTGAAAGTGGAAGAGATGGCAAAGAAGAAGGAATTTCTT GACGAGGAAGATTTGGACAAGTTGGAAGACAGACCCCCTATTGTAACTATCATGGGCCAT GTCGATCATGGAAAGACTACCCTGTTGGATTATATACGCAAGAGCAAGGTGGTGGCATCT GAGGCTGGCGGAATAACACAAGGGATTGGTGCCTATCAGGTTATTGTACAGGTTGATGGA AACCCTCATGCTTGTGTTTTTCTTGATACTCCAGGGCACGAGGCATTTGGTGCAATGAGA GCTCGGGGTGCTAGGGTAACTGATATCTGTATCATTGTTGTCTCTGCGGATGATGGTGTT CGTCCACAAACAAATGAGGCAATTGCACATGCAAAGGCAGCTGGAGTCCCTATTGTGATA GCCATAAACAAGATAGACAAGGAAGGAGCTAATGCTGAACGGGTCATGCAAGAGCTTTCC CAAATTGGACTTATGCCAGAGGCGTGGGGTGGTGATATCCCAATGATTCAGATAAGTGCT CTTAATGGAGAGGGTGTAGATGAACTATTGGAGACTATCATTCTTGTTGCTGAGCTGCAA GAATTAAAGGCCAATCCTCATAGAAATGCAAAGGGTACAGTTATTGAAGCATGCCTTGAC AAAGCTAAAGGATCTCTTGCCACCCTAGTTGTACAGAATGGAACCCTAAACAAGGGTGAT ATTGTTGTGTGTGGTGAGGCTTTTGGAAAGATCCGTGCAATGTATGATGATGGTGGAAAG CTTATCGATAAGGCTGGGCCATCCAATGCCGTGCAGGTTATTGGCTTGAATAATGTACCC CTTGCTGGTGATGAATTTGAGTCTGTGGACAACCTTGATGTTGCACGTGAAAGGGCAAAC GCACGTGCTGAAGCACTGAGAATTGAAAGGATATCTTCGAAAGCTGGGGAAGGGAAAGTC ACTCTGTCATCCATTGCTGCATCTGTTTCATCTGGAAAACAAGTAGGAATTGATACACAC GAGCTTAATATCATCCTTAAAGTTGATTTTCAGGGTTCAGTTGAGGCCATTAGGCAAGCA ATCCAAGTGCTGCCTCAAGAAAATGTCTCCTTGAGGTTCCTACTTCAAGCTCCGGGAGAT GTGAGTGTCAGTGATGTTGATCTGGCTGTTGCTTCAGAAGGGATTATATTTGGTTTTAAT GTCAAAGCTCCAGGATCAGTTAAAAGCTATGCTAAGAAGAAAAGTGTGGAAATTCGTCTG TACAAGGTGATCTATGATTTGATTGATGATTTGCGGAATGCCATGGAAGGACTTCTTGAA CTTGCTGAGGAGGAAGTACCAATTGGTTCAGCCAAAGTTCGTGCTGTTTTTAGTAGTGGC AGTGGCAAGGTGGCGGGTTGCATGATTACTACTGGGAAAGTTGTTCATGACTGCAATGTT CGGGTTCTTCGTAAAGGGAAAGAAGTTTATATGGGTACACTTGATTCGTTAAGACGGGTG AAAGAAACTGTAAAGGAGGTTGGTGCTGGGCTAGAGTGTGGCATTGGGGTAGATGATTTT GACGAATGGGAGGAAGGTGATGTCGTGGAGGCATTCAACACAGTTAAGAAGACAAGAACC CTAGAGGAAGCCTCTGCTTCTGTGACTGCTGCTCTAAAGGATGCCGGCGTCCAGCTGTAG AAGTGGCAAAGCTGATAGGCATCCATCATACAACAACTGCAGGGGAATCGGAGCCAAATT TATCATGGCAAGAAAGAAAGAAAGACGGGGTGCATTATTGATCACATTGCTGTTGTTAGC GAAGAACAACAAACTGGTTACTCGATCGTAAATACGACGAACTTATGCAAGCCATAGTAC AGTAGTCACCAAACCTGAGCTTAGCCGTCTCTTATAGCCTGCATCAGCTGATGCTGTATT TTGATGTACATAACAAGAGAGGAGACAGCTGTTACCTTTTTTTAGTTTGCCACTAACAGG TAGATAAGCAGTGTTGTCTAATTTTACACCACCTGATTTTTGACACAGGATGTAATTACT CTGTAATGGTGACACCATCATTATTCAATCATCATTCATGCAT