Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0574900-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:28640262:28641986:1 gene:Os05g0574900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SLENDER RICE LIKE 2 description:GRAS transcription factor domain containing protein. (Os05t0574900-01)
Sequence	ATGGCTCAGTTCGGCGGCTTCGGTGGCTGGTCCGCCATGGACGTTGCCGCTGCCGCCGCC GCTGCTCTGGGCAACGTCAGCGGCGCGGTGTACCACGCCGATCCTGCTGCTGCCGTGTAC GCGTCTCTAGTCCCTGGCATGGCTGTGGTCCCCGGGCGTGCTCCGCCGTCCGCCGTGCAG ATCGAGGCGGCGAGGCGGTGGAAGGAGCTGGAGAAGATGGCCCTGCGGTCGGTGAATCTC ATGGTGACGTGCGCCGGCGCCATCCAGGCGGGCGACTACGCGGCGGCGGCCGGGAGCCTG TCCGACGCGCGCGAGATCTTCGCCAAGATGCCCACCACCCGCACCGGGATCGGCCGCGTC CTCACCCACTTCGCCGACGCGCTCGCCGAGCGCCTGTTCCCGGCGTTCCCGCAGTCCGCG CCGCCGCCGCCCCCGCCACGCGGGGAGCAGCGCGAGCTCTTCCGCGGGTTCTACGAGGCG GGGCCGTACCTCAAGTTCGCCCACCTCGCGGCGAACCAGGCCATCCTCGAGGCGTTCGAG GGGTGCAACAGCGTGCACGTGATCGACTTCGCCCTCACCGATGGCATCCAGTGGCCGTCG CTCATCCAGGCCTTGGCCGTCCGCCCCGGCGGCCCGCCGTTCCTCCGCATCACCGGGATC GGCCCCCACGCCGCCGGCAACCGCGACGAGCTCCGCGACGTGGGCCTCCGCCTCGCCGAG TTCGCGAGATCTTGCAGCGTCCCCTTCGCCTTCCGCGGGATCGCCGCGGACCAGCTCGAC GGGCTCCGCCCGTGGATGTTCCAGGTCGCGCCCGGCGAGGCCGTCGCCATCAACTCCGTG CTCCAGCTCCACCGCCTCCTGGTCGACCAGGACGCCGCCGCCGCGGCGTCGTTCCCGGCG CCCATCGACGGCGTGCTCGACTGGGTCGCGTCCATGAACCCCAGGGTCTTCACGGTGGTC GAGCAGGAGGCGGATCACAACAAGTCGTCGCTGCTCGAGAGGTTCACTAACTCCCTCTTC TACTACGCCTCCATGTTCGACTCGCTCGAGGCTATCAGCCGCCATGGCGGCGGCGACGGG GCGGGCAACCCGCTCGCCGAGGCGTACCTGCAGGGGGAGATCGCCGACATCGTGAGCCGC GAGGGGAGCAGCCGGGTGGAGCGCCACGAGCAGATGCCGCGGTGGGTGGAGAGGCTGCGG CGCGGGGGGATGACGCAGCTGCCGCTCGGCGCCACCGGCCTCTGGCAGGCGGCGATGCAG CTCCGCGAGTTCTCCGGCGCCGGCTTCGGCGTCCAGGAGAACGGCGGCTTCCTCACGCTC ACCTGGCATAGCCAGAGGCTGTACTCGGCGTCGGCGTGGCGCGCGACCGCGGGGAAGAAG ATGACGATGATGGCTAGCGGCGCCGCCGACGCCATGGAGGAGAGTCAGAACAGCAACACC AACGGCGGCGGCGGCGGAAGCAGTGGTGGTGGCCATGGTGCTCTCAACCAAATCATGCAG TGA

Peptide Sequence

PEP ID	Os05t0574900-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:28640262:28641986:1 gene:Os05g0574900 transcript:Os05t0574900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SLENDER RICE LIKE 2 description:GRAS transcription factor domain containing protein. (Os05t0574900-01)
Sequence	MAQFGGFGGWSAMDVAAAAAAALGNVSGAVYHADPAAAVYASLVPGMAVVPGRAPPSAVQ IEAARRWKELEKMALRSVNLMVTCAGAIQAGDYAAAAGSLSDAREIFAKMPTTRTGIGRV LTHFADALAERLFPAFPQSAPPPPPPRGEQRELFRGFYEAGPYLKFAHLAANQAILEAFE GCNSVHVIDFALTDGIQWPSLIQALAVRPGGPPFLRITGIGPHAAGNRDELRDVGLRLAE FARSCSVPFAFRGIAADQLDGLRPWMFQVAPGEAVAINSVLQLHRLLVDQDAAAAASFPA PIDGVLDWVASMNPRVFTVVEQEADHNKSSLLERFTNSLFYYASMFDSLEAISRHGGGDG AGNPLAEAYLQGEIADIVSREGSSRVERHEQMPRWVERLRRGGMTQLPLGATGLWQAAMQ LREFSGAGFGVQENGGFLTLTWHSQRLYSASAWRATAGKKMTMMASGAADAMEESQNSNT NGGGGGSSGGGHGALNQIMQ

Transcript Sequence

Transcript ID	Os05t0574900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:28640262:28641986:1 gene:Os05g0574900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SLENDER RICE LIKE 2 description:GRAS transcription factor domain containing protein. (Os05t0574900-01)
Sequence	CATTCCACCAAACCAAGCCAAGCAAGCCTCACACCCTCGCCCGCGTCGTCTTCCTCCTAG CCGCCGTCGCGCATGGCTCAGTTCGGCGGCTTCGGTGGCTGGTCCGCCATGGACGTTGCC GCTGCCGCCGCCGCTGCTCTGGGCAACGTCAGCGGCGCGGTGTACCACGCCGATCCTGCT GCTGCCGTGTACGCGTCTCTAGTCCCTGGCATGGCTGTGGTCCCCGGGCGTGCTCCGCCG TCCGCCGTGCAGATCGAGGCGGCGAGGCGGTGGAAGGAGCTGGAGAAGATGGCCCTGCGG TCGGTGAATCTCATGGTGACGTGCGCCGGCGCCATCCAGGCGGGCGACTACGCGGCGGCG GCCGGGAGCCTGTCCGACGCGCGCGAGATCTTCGCCAAGATGCCCACCACCCGCACCGGG ATCGGCCGCGTCCTCACCCACTTCGCCGACGCGCTCGCCGAGCGCCTGTTCCCGGCGTTC CCGCAGTCCGCGCCGCCGCCGCCCCCGCCACGCGGGGAGCAGCGCGAGCTCTTCCGCGGG TTCTACGAGGCGGGGCCGTACCTCAAGTTCGCCCACCTCGCGGCGAACCAGGCCATCCTC GAGGCGTTCGAGGGGTGCAACAGCGTGCACGTGATCGACTTCGCCCTCACCGATGGCATC CAGTGGCCGTCGCTCATCCAGGCCTTGGCCGTCCGCCCCGGCGGCCCGCCGTTCCTCCGC ATCACCGGGATCGGCCCCCACGCCGCCGGCAACCGCGACGAGCTCCGCGACGTGGGCCTC CGCCTCGCCGAGTTCGCGAGATCTTGCAGCGTCCCCTTCGCCTTCCGCGGGATCGCCGCG GACCAGCTCGACGGGCTCCGCCCGTGGATGTTCCAGGTCGCGCCCGGCGAGGCCGTCGCC ATCAACTCCGTGCTCCAGCTCCACCGCCTCCTGGTCGACCAGGACGCCGCCGCCGCGGCG TCGTTCCCGGCGCCCATCGACGGCGTGCTCGACTGGGTCGCGTCCATGAACCCCAGGGTC TTCACGGTGGTCGAGCAGGAGGCGGATCACAACAAGTCGTCGCTGCTCGAGAGGTTCACT AACTCCCTCTTCTACTACGCCTCCATGTTCGACTCGCTCGAGGCTATCAGCCGCCATGGC GGCGGCGACGGGGCGGGCAACCCGCTCGCCGAGGCGTACCTGCAGGGGGAGATCGCCGAC ATCGTGAGCCGCGAGGGGAGCAGCCGGGTGGAGCGCCACGAGCAGATGCCGCGGTGGGTG GAGAGGCTGCGGCGCGGGGGGATGACGCAGCTGCCGCTCGGCGCCACCGGCCTCTGGCAG GCGGCGATGCAGCTCCGCGAGTTCTCCGGCGCCGGCTTCGGCGTCCAGGAGAACGGCGGC TTCCTCACGCTCACCTGGCATAGCCAGAGGCTGTACTCGGCGTCGGCGTGGCGCGCGACC GCGGGGAAGAAGATGACGATGATGGCTAGCGGCGCCGCCGACGCCATGGAGGAGAGTCAG AACAGCAACACCAACGGCGGCGGCGGCGGAAGCAGTGGTGGTGGCCATGGTGCTCTCAAC CAAATCATGCAGTGAAGAAGAGGGATGTTTGGGTTTCGAAGTTTATGTGGGGGAAACAAT GTGATCGATTTTGATGAACCAGATTAAAAAGTTGTAATAATATTGCATTTAGTCTGAGAG AGCAACATGTTGGTTTTCGAATTAATAATAAAATGTCGTTTCTAG