Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0574600-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:28625224:28627550:-1 gene:Os05g0574600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Chalcone Synthase, FATTY ACID ELONGATION1, fatty acid elongase 1 description:Similar to 3-ketoacyl-CoA synthase. (Os05t0574600-01)
Sequence	ATGGCCGAGCAGCAGCAGCAGCAAGCGCCGCTGCTGCAGAGGCCAGCCGCTGCACCGCCG TCGTCGAGCCGGCTGCCGGACTTCAAGCAATCGGTGAAGCTCAAGTACGTGAAGCTGGGG TACCACTACCTCATCACCCACGGCGCGTACCTCCTGCTCGCCCCGCTCCCGGGCCTCGTG GCGGCGCACCTCTCCACCTTCACGCTGGGCGACCTCGCCGACCTGTGGCAAAACCTCCAG TACAACCTCGTCTCCGTGCTCCTCTGCTCCACGCTGCTGGTGCTCGTCTCCACCGCCTAC TTCCTCACGCGCCCGCGCCCCGTCTACCTCGTCGACTTCGCGTGCTACAAGCCCGACGAC GAGCGCAAGTGCAGCCGCGCGCGCTTCATGAACTGCACCGAGCGGCTCGGCACGTTCACG CCGGAGAACGTCGAGTTCCAGCGCAAGATCATCGAGCGCTCGGGCCTCGGCGAGGACACG TACCTCCCCGAGGCGGTGCTCAACATCCCGCCCAACCCCTCCATGGCCAACGCGAGGAAG GAGGCCGAGATGGTCATGTACGGCGCGCTCGACGAGCTGCTCGCCAAGACCGGCGTGAAC CCCAAGGACATCGGCATCCTGGTCGTCAACTGCAGCCTCTTCAACCCGACGCCGTCGCTG TCCGCCATGGTGGTGAACCACTACAAGCTGAGGGGCAACGTCGTCAGCTACAACCTCGGC GGCATGGGGTGCAGCGCCGGCCTCATCTCCATCGACCTCGCCAAGGACCTCCTGCAGGTG TACCCCAACACGTACGCCGTGGTGATCAGCATGGAGAACATCACGCTCAACTGGTACTTC GGCAACGACCGCTCCATGCTCGTGTCCAACTGCCTCTTCCGCATGGGCGGCGCGGCGATC CTCCTCTCCAACCGCGGCTCCGCGAGGCGGCGCTCCAAGTACCAGCTGGTGCACACCGTG CGCACGCACCGCGGCGCCGACGACCGGTGCTTCGGCTGCGTGACGCAGCGGGAGGACGCT GACGGGAAGACCGGCGTGTCGCTGTCCAAGGACCTGATGGCGGTGGCCGGCGAGGCGCTC AAGACCAACATCACCACGCTGGGCCCGCTGGTGCTCCCCATGTCGGAGCAGCTCCTCTTC TTCGCGACGCTCGTCACCCGCAAGGTGCTGAAGCGGAAGGTGAAGCCGTACATCCCGGAC TTCAAGCTGGCGTTCGAGCACTTCTGCATCCACGCCGGCGGCCGCGCCGTGCTGGACGAG CTGGAGAAGAACCTGCAGCTGTCGGACTGGCACATGGAGCCGTCGCGGATGACGCTGCAC AGGTTCGGGAACACGTCGAGCAGCTCGCTGTGGTACGAGCTCGCCTACGCCGAGGCCAAG GGGCGGATCAAGAAGGGGGACAGGACGTGGCAGATCGCCTTCGGCTCCGGCTTCAAGTGC AACAGCGCCGTGTGGAGGGCGCTCCGGTCGGTGAACCCGGCCAAGGAGAACAACTTCACC AACCCGTGGATCGACGAGATCCACCGCTTCCCGGTGCCCGTCCCCAAGGTGTCGGCCATA TGA

Peptide Sequence

PEP ID	Os05t0574600-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:28625224:28627550:-1 gene:Os05g0574600 transcript:Os05t0574600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Chalcone Synthase, FATTY ACID ELONGATION1, fatty acid elongase 1 description:Similar to 3-ketoacyl-CoA synthase. (Os05t0574600-01)
Sequence	MAEQQQQQAPLLQRPAAAPPSSSRLPDFKQSVKLKYVKLGYHYLITHGAYLLLAPLPGLV AAHLSTFTLGDLADLWQNLQYNLVSVLLCSTLLVLVSTAYFLTRPRPVYLVDFACYKPDD ERKCSRARFMNCTERLGTFTPENVEFQRKIIERSGLGEDTYLPEAVLNIPPNPSMANARK EAEMVMYGALDELLAKTGVNPKDIGILVVNCSLFNPTPSLSAMVVNHYKLRGNVVSYNLG GMGCSAGLISIDLAKDLLQVYPNTYAVVISMENITLNWYFGNDRSMLVSNCLFRMGGAAI LLSNRGSARRRSKYQLVHTVRTHRGADDRCFGCVTQREDADGKTGVSLSKDLMAVAGEAL KTNITTLGPLVLPMSEQLLFFATLVTRKVLKRKVKPYIPDFKLAFEHFCIHAGGRAVLDE LEKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYAEAKGRIKKGDRTWQIAFGSGFKC NSAVWRALRSVNPAKENNFTNPWIDEIHRFPVPVPKVSAI

Transcript Sequence

Transcript ID	Os05t0574600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:28625224:28627550:-1 gene:Os05g0574600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Chalcone Synthase, FATTY ACID ELONGATION1, fatty acid elongase 1 description:Similar to 3-ketoacyl-CoA synthase. (Os05t0574600-01)
Sequence	GATCTCTCCCCCCCAAGCAAAAAGCCCAACAACCGCCCCCGCGCGCCGATGGAGACGAGC CGCCGTCCCGCCCGTCCGCGCCTTGCGTTTCTGAGGCCGTTCAGGCGGAACGCATGAGCA AGGCGTTCCCCCACGGCCGGTTGCTTATCGCACAGGGCCTTTCTGCTACGCCGGCGCCCG ACCGGCTCGGCGTTTTCGCGGTGCGCGCGCGCGTGGCTGGCATGCATTATCCGATACGGA TCGACTCGATCGACCGACCAGCTGGTCGCAATCGGACTCCTGTTCCGATTAGGAATATTG GTGATCGGTGCATGCATCTCTTATCCCTCTCGTCTATATAACTCAGTCAGGGGACAAACG AGTTCGTCCAAGTGCAAGTAACCCCACGTTCTTTGTGCTTGTGACCGCAGTCGTGGTTTG CAATCTTTGTGTTCGGTGAGGTTTGTTTGCTGCATGCCATGGCCGAGCAGCAGCAGCAGC AAGCGCCGCTGCTGCAGAGGCCAGCCGCTGCACCGCCGTCGTCGAGCCGGCTGCCGGACT TCAAGCAATCGGTGAAGCTCAAGTACGTGAAGCTGGGGTACCACTACCTCATCACCCACG GCGCGTACCTCCTGCTCGCCCCGCTCCCGGGCCTCGTGGCGGCGCACCTCTCCACCTTCA CGCTGGGCGACCTCGCCGACCTGTGGCAAAACCTCCAGTACAACCTCGTCTCCGTGCTCC TCTGCTCCACGCTGCTGGTGCTCGTCTCCACCGCCTACTTCCTCACGCGCCCGCGCCCCG TCTACCTCGTCGACTTCGCGTGCTACAAGCCCGACGACGAGCGCAAGTGCAGCCGCGCGC GCTTCATGAACTGCACCGAGCGGCTCGGCACGTTCACGCCGGAGAACGTCGAGTTCCAGC GCAAGATCATCGAGCGCTCGGGCCTCGGCGAGGACACGTACCTCCCCGAGGCGGTGCTCA ACATCCCGCCCAACCCCTCCATGGCCAACGCGAGGAAGGAGGCCGAGATGGTCATGTACG GCGCGCTCGACGAGCTGCTCGCCAAGACCGGCGTGAACCCCAAGGACATCGGCATCCTGG TCGTCAACTGCAGCCTCTTCAACCCGACGCCGTCGCTGTCCGCCATGGTGGTGAACCACT ACAAGCTGAGGGGCAACGTCGTCAGCTACAACCTCGGCGGCATGGGGTGCAGCGCCGGCC TCATCTCCATCGACCTCGCCAAGGACCTCCTGCAGGTGTACCCCAACACGTACGCCGTGG TGATCAGCATGGAGAACATCACGCTCAACTGGTACTTCGGCAACGACCGCTCCATGCTCG TGTCCAACTGCCTCTTCCGCATGGGCGGCGCGGCGATCCTCCTCTCCAACCGCGGCTCCG CGAGGCGGCGCTCCAAGTACCAGCTGGTGCACACCGTGCGCACGCACCGCGGCGCCGACG ACCGGTGCTTCGGCTGCGTGACGCAGCGGGAGGACGCTGACGGGAAGACCGGCGTGTCGC TGTCCAAGGACCTGATGGCGGTGGCCGGCGAGGCGCTCAAGACCAACATCACCACGCTGG GCCCGCTGGTGCTCCCCATGTCGGAGCAGCTCCTCTTCTTCGCGACGCTCGTCACCCGCA AGGTGCTGAAGCGGAAGGTGAAGCCGTACATCCCGGACTTCAAGCTGGCGTTCGAGCACT TCTGCATCCACGCCGGCGGCCGCGCCGTGCTGGACGAGCTGGAGAAGAACCTGCAGCTGT CGGACTGGCACATGGAGCCGTCGCGGATGACGCTGCACAGGTTCGGGAACACGTCGAGCA GCTCGCTGTGGTACGAGCTCGCCTACGCCGAGGCCAAGGGGCGGATCAAGAAGGGGGACA GGACGTGGCAGATCGCCTTCGGCTCCGGCTTCAAGTGCAACAGCGCCGTGTGGAGGGCGC TCCGGTCGGTGAACCCGGCCAAGGAGAACAACTTCACCAACCCGTGGATCGACGAGATCC ACCGCTTCCCGGTGCCCGTCCCCAAGGTGTCGGCCATATGATCCAACCACACGCGTTGGC TGTTTGCACTGAAACATTATTACTAGCAGTAGCTTAGTAGTAGTAGTAGAAATGAACTAG GATCTATTCGTTATTGCTTGTGTATTGATCTGATCATATCTGGTTCGCTGTTCTTATGTG AAGTTGCTCTGTCGGTCTGGCATGTAAGAAGGTCTGATCATAAGTTCACTTCAAAAGTTA ATTTACATCTTC