Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0573300-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:28551323:28557309:-1 gene:Os05g0573300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CTP synthase 1 (EC 6.3.4.2) (UTP--ammonia ligase 1) (CTP synthetase 1). (Os05t0573300-01)
Sequence	ATGAAGTACGTGCTGGTGACGGGCGGGGTGGTGAGCGGCCTCGGGAAGGGGGTGACGGCG AGCAGCATCGGCGTCGTGCTCAAGGACTGCGGCCTCCGCGTCACCTCCATCAAGATCGAT CCTTACCTCAACACCGATGCTGGAACCATGTCTCCATTCGAGCACGGTGAAGTGTTTGTT TTGGACGATGGTGGTGAGGTGGACTTGGACCTTGGAAATTATGAGCGATTTCTGGACATC AAGTTGACTCGTGACAACAATATAACCACGGGAAAGATCTATCAGGCTGTTATTGACAAG GAACGAAGAGGAGACTACTTGGGAAAAACTGTTCAGGTTGTACCACACATTACGGATGAA ATACAGGAGTGGATTGAACGTGTGGCAATGAATCCAGTTGATGGCACAGATGAGCCAGCT GATGTTTGTGTAATAGAACTTGGTGGCACTATAGGGGATATTGAATCAATGCCTTTTATT GAAGCATTAGGTCAATTTTCATACCGCGTAGGGGCTGGAAACTTTTGCCTAGTTCATGTC AGTCTTGTACCAGTTCTAAATGTAGTTGGTGAACAGAAAACCAAACCTACCCAACATAGT GTCCGTGGACTAAGAGGACTTGGACTGATACCTGATATTTTAGCATGTCGCAGTACTCAG CCACTTGAAGAAAATGTGAAAGTGAAACTCGCACAATTTTGCCACGTTCCGATCTCAAAT ATTGTCAATCTTCACGATGTTACCAACATCTGGCACATCCCTTTGTTGCTTAGGGACCAG AAGGCTCATGAATCTATTCTGAAAGTTTTAGATCTTCAATGTGTGGGAAAAGTGCCTCGA GCACCTAAGCTGACTGAATGGACTGAAAGAGCCAGCAAATTCGACAAACTGAAAACTCCT GTTAGGATTGCCATGGTTGGAAAGTATACTGGCCTATCAGACTCCTACTTGTCAGTTTTG AAGGCTCTTCTGCATGCATCGGTTGCTTTGGACAGAAAACTTGTGGTGGATTGGGTTCCT TCCTGTGATCTTGAAGATTCTGCAGCCACAGAGACTCCTGATGCATATGAAAAAGCTTGG GATCTACTAAAGGGTGCACATGGTGTACTAGTTCCAGGAGGCTTTGGAGATAGAGGGGTC CAGGGAAAAATTCTTGCTGCAAAATATGCGCGAGAAAACAATGTTCCATATCTTGGTATT TGCCTGGGCATGCAAATTGCAGTGATCGAATTCGCCCGCTCTGTCATGAAGTTGCGTGGT GCTAATAGTACAGAGTTTGATCCAGCTACAACGACGCCATGTGTTATTTTCATGCCGGAG GGCTCTAAAACCCATATGGGGGCAACAATGCGCCTTGGATCAAGGAGGACCTTCTTCCAG GCCAATACATGCAAATCAGCTAAGCTGTATGGCAATGCAAGCTATGTAGATGAAAGGCAC CGCCACCGATATGAGGTGAATCCTGAAATGGTTCCAGAATTTGAGAAGGCAGGTCTCTCT TTTGTTGGCAGGGATGAAAGCGGGACACGCATGGAGATAATTGAGCTACCAACTCATAGG TTTTTTGTTGGCGCACAATTTCATCCTGAATTCAAGTCAAGACCTGGAAAGCCATCCCCA CTTTTCATGGGATTAATAGCAGCTTCATCAGGACAGCTTGACCATTTACTTCAGCAATCT TGCGGCGTTGTCAGCTCGCCAGTCAGACGTGGCAACTACTGCAACGGAGCCACGAAACAA CAGAAGCTATACCAAAATGGACATGTCAAGAACGGCCTGGTGAACGGCTGCTACTATGCA AACGGCAACAGCATTCTTCATACTTAG

Peptide Sequence

PEP ID	Os05t0573300-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:28551323:28557309:-1 gene:Os05g0573300 transcript:Os05t0573300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CTP synthase 1 (EC 6.3.4.2) (UTP--ammonia ligase 1) (CTP synthetase 1). (Os05t0573300-01)
Sequence	MKYVLVTGGVVSGLGKGVTASSIGVVLKDCGLRVTSIKIDPYLNTDAGTMSPFEHGEVFV LDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQAVIDKERRGDYLGKTVQVVPHITDE IQEWIERVAMNPVDGTDEPADVCVIELGGTIGDIESMPFIEALGQFSYRVGAGNFCLVHV SLVPVLNVVGEQKTKPTQHSVRGLRGLGLIPDILACRSTQPLEENVKVKLAQFCHVPISN IVNLHDVTNIWHIPLLLRDQKAHESILKVLDLQCVGKVPRAPKLTEWTERASKFDKLKTP VRIAMVGKYTGLSDSYLSVLKALLHASVALDRKLVVDWVPSCDLEDSAATETPDAYEKAW DLLKGAHGVLVPGGFGDRGVQGKILAAKYARENNVPYLGICLGMQIAVIEFARSVMKLRG ANSTEFDPATTTPCVIFMPEGSKTHMGATMRLGSRRTFFQANTCKSAKLYGNASYVDERH RHRYEVNPEMVPEFEKAGLSFVGRDESGTRMEIIELPTHRFFVGAQFHPEFKSRPGKPSP LFMGLIAASSGQLDHLLQQSCGVVSSPVRRGNYCNGATKQQKLYQNGHVKNGLVNGCYYA NGNSILHT

Transcript Sequence

Transcript ID	Os05t0573300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:28551323:28557309:-1 gene:Os05g0573300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CTP synthase 1 (EC 6.3.4.2) (UTP--ammonia ligase 1) (CTP synthetase 1). (Os05t0573300-01)
Sequence	TCCTCACACACATCCCAAAAACCAAAAACCAAAAACCAAAAACCAAAACCTCTCCTCTTC CCTCTCCTTCTCTACCCTCTTCTTCGTCCTCCTCCATCCGAGAGGCAGCAAGCCAGCAAC TGCACGAGCAACCACCCGTAGTCAGTGACCTAGGCGGCGGAGGGAGATCGGCCGGCGGCG AGCGACGACGATGAAGTACGTGCTGGTGACGGGCGGGGTGGTGAGCGGCCTCGGGAAGGG GGTGACGGCGAGCAGCATCGGCGTCGTGCTCAAGGACTGCGGCCTCCGCGTCACCTCCAT CAAGATCGATCCTTACCTCAACACCGATGCTGGAACCATGTCTCCATTCGAGCACGGTGA AGTGTTTGTTTTGGACGATGGTGGTGAGGTGGACTTGGACCTTGGAAATTATGAGCGATT TCTGGACATCAAGTTGACTCGTGACAACAATATAACCACGGGAAAGATCTATCAGGCTGT TATTGACAAGGAACGAAGAGGAGACTACTTGGGAAAAACTGTTCAGGTTGTACCACACAT TACGGATGAAATACAGGAGTGGATTGAACGTGTGGCAATGAATCCAGTTGATGGCACAGA TGAGCCAGCTGATGTTTGTGTAATAGAACTTGGTGGCACTATAGGGGATATTGAATCAAT GCCTTTTATTGAAGCATTAGGTCAATTTTCATACCGCGTAGGGGCTGGAAACTTTTGCCT AGTTCATGTCAGTCTTGTACCAGTTCTAAATGTAGTTGGTGAACAGAAAACCAAACCTAC CCAACATAGTGTCCGTGGACTAAGAGGACTTGGACTGATACCTGATATTTTAGCATGTCG CAGTACTCAGCCACTTGAAGAAAATGTGAAAGTGAAACTCGCACAATTTTGCCACGTTCC GATCTCAAATATTGTCAATCTTCACGATGTTACCAACATCTGGCACATCCCTTTGTTGCT TAGGGACCAGAAGGCTCATGAATCTATTCTGAAAGTTTTAGATCTTCAATGTGTGGGAAA AGTGCCTCGAGCACCTAAGCTGACTGAATGGACTGAAAGAGCCAGCAAATTCGACAAACT GAAAACTCCTGTTAGGATTGCCATGGTTGGAAAGTATACTGGCCTATCAGACTCCTACTT GTCAGTTTTGAAGGCTCTTCTGCATGCATCGGTTGCTTTGGACAGAAAACTTGTGGTGGA TTGGGTTCCTTCCTGTGATCTTGAAGATTCTGCAGCCACAGAGACTCCTGATGCATATGA AAAAGCTTGGGATCTACTAAAGGGTGCACATGGTGTACTAGTTCCAGGAGGCTTTGGAGA TAGAGGGGTCCAGGGAAAAATTCTTGCTGCAAAATATGCGCGAGAAAACAATGTTCCATA TCTTGGTATTTGCCTGGGCATGCAAATTGCAGTGATCGAATTCGCCCGCTCTGTCATGAA GTTGCGTGGTGCTAATAGTACAGAGTTTGATCCAGCTACAACGACGCCATGTGTTATTTT CATGCCGGAGGGCTCTAAAACCCATATGGGGGCAACAATGCGCCTTGGATCAAGGAGGAC CTTCTTCCAGGCCAATACATGCAAATCAGCTAAGCTGTATGGCAATGCAAGCTATGTAGA TGAAAGGCACCGCCACCGATATGAGGTGAATCCTGAAATGGTTCCAGAATTTGAGAAGGC AGGTCTCTCTTTTGTTGGCAGGGATGAAAGCGGGACACGCATGGAGATAATTGAGCTACC AACTCATAGGTTTTTTGTTGGCGCACAATTTCATCCTGAATTCAAGTCAAGACCTGGAAA GCCATCCCCACTTTTCATGGGATTAATAGCAGCTTCATCAGGACAGCTTGACCATTTACT TCAGCAATCTTGCGGCGTTGTCAGCTCGCCAGTCAGACGTGGCAACTACTGCAACGGAGC CACGAAACAACAGAAGCTATACCAAAATGGACATGTCAAGAACGGCCTGGTGAACGGCTG CTACTATGCAAACGGCAACAGCATTCTTCATACTTAGCAGCATAGCTCTGCATCAGGCCA TTGCACTTGAGAGATTTACCTGCTTTGTTTTTTCTCCCTTTTTTTTGCGTGTTTTTTCTC CTATTTTTTTTAGGGTTATGGATTCGTCTCTCTGCTAAACTAAGAAGAGATTGAAAGGGT CCTTAGCTCCAGCGACATGAAGAGCCATTTCCGATGTTTTAAGGAGGGAGAAATGAGCAC TTGAGCTGTCGCATCAACGCAAAAATAGCTAGGGTTTACTAGTAGTGAACTAGTTAATCT AATGCAATATTATTATTTCTTTTGTTTGTTCGTTTGCTTGCTTGATGCCTTATATTATAT TGAAGTTTAAGGCTAGCTGGAGGTGTGTAGCTAGCTTGGTGGAGCCTGCACATTTCATCT GTTTGTACATTGGAAAAGAACCACTATTTTCTTAGTAACTGAATTGATGAATACACATTA TTTGG