Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0573200-00
CDS Infomation	cds chromosome:IRGSP-1.0:5:28547571:28551291:1 gene:Os05g0573200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Isocitrate dehydrogenase (Fragment). (Os05t0573200-00)
Sequence	ATGGCATCCACCAAGATCAAGGTCGCCAACCCCATTGTCGAGATGGACGGTGATGAGATG ACTCGAGTATTCTGGAAATCTATCAAGGACAAGCTTATCTTCCCGTTCTTGGAGTTGGAC ATTAAGTACTTTGATCTCGGACTTCCATACCGTGATCAAACCGACGATAAAGTCACAGTG GAGGCAGCAGAGGCTACCCTCAAGTACAATGTGGCCATCAAGTGTGCAACCATTACACCA GATGAAGCAAGGGTTAAAGAGTTCAGCCTAAAATCCATGTGGAAGAGCCCAAACGGCACA ATTAGAAATATCCTAAATGGCACTGTGTTCAGAGAACCAATAATCTGCAAAAACATCCCT CGGCTTGTTCCAGGATGGACTAAGCCCATTTGCATTGGAAGGCACGCATTTGGTGATCAG TACCGTGCAACGGATGCAGTTATCAAGGGACCTGGCAAGCTTAAATTGGTTTATGAGGGA AAAGATGAGGAGATTGAGCTGGAGGTGTTCAACTTCACTGGTGCTGGAGGAGTGGCACAG TCTATGTACAACACTGACGAGTCCATCCGTTCCTTTGCTGAGGCCTCTATGGCCACTGCT TATGAGAAGAAATGGCCATTGTACCTCAGCACCAAAAACACAATTTTGAAGAAATATGAT GGCAGGTTCAAGGACATCTTCCAGGAGGTATATGAAGCTCAGTGGAAATCAAAATTTGAG GCTGCTGGAATATGGTATGAGCATCGTCTCATTGATGACATGGTTGCCTATGCACTCAAG AGTGAAGGAGGCTATGTTTGGGCTTGCAAGAACTATGATGGAGATGTGCAGAGTGATTTC TTAGCACAAGGTTTTGGATCATTGGGTTTGATGACATCAGTTTTGGTATGTCCTGATGGG AAAACCATTGAAGCTGAAGCTGCCCATGGGACTGTCACCCGTCATTACCGTGTTCATCAG AAAGGTGGTGAAACTAGCACAAACAGCATTGCCTCAATCTTTGCCTGGACAAGAGGACTT GCACACAGGGCAAAGCTAGATGACAATGCTAGGCTACTGGACTTCACTCAGAAGCTTGAA GCTGCCTGCATTGGCGCTGTCGAGTCTGGGAAGATGACCAAGGACCTTGCTCTGCTTGTT CACGGATCTTCAAATGTCACGAGGAGTCATTACCTGAACACTGAAGAGTTCATCGATGCT GTTGCTGACGAGCTCAGATCAAGGCTGGCAGCCAACTAA

Peptide Sequence

PEP ID	Os05t0573200-00
PEP Infomation	pep chromosome:IRGSP-1.0:5:28547571:28551291:1 gene:Os05g0573200 transcript:Os05t0573200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Isocitrate dehydrogenase (Fragment). (Os05t0573200-00)
Sequence	MASTKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPYRDQTDDKVTV EAAEATLKYNVAIKCATITPDEARVKEFSLKSMWKSPNGTIRNILNGTVFREPIICKNIP RLVPGWTKPICIGRHAFGDQYRATDAVIKGPGKLKLVYEGKDEEIELEVFNFTGAGGVAQ SMYNTDESIRSFAEASMATAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAQWKSKFE AAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDG KTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLDFTQKLE AACIGAVESGKMTKDLALLVHGSSNVTRSHYLNTEEFIDAVADELRSRLAAN

Transcript Sequence

Transcript ID	Os05t0573200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:28547571:28551291:1 gene:Os05g0573200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Isocitrate dehydrogenase (Fragment). (Os05t0573200-00)
Sequence	CTTCTTCTTCTTCCTCAAGACTACCAATCCAATCTCCTCCTCGCCGCCATCGCGATCTCC GCCGCCGCCCGCCTGTCGCGGCCATGGCATCCACCAAGATCAAGGTCGCCAACCCCATTG TCGAGATGGACGGTGATGAGATGACTCGAGTATTCTGGAAATCTATCAAGGACAAGCTTA TCTTCCCGTTCTTGGAGTTGGACATTAAGTACTTTGATCTCGGACTTCCATACCGTGATC AAACCGACGATAAAGTCACAGTGGAGGCAGCAGAGGCTACCCTCAAGTACAATGTGGCCA TCAAGTGTGCAACCATTACACCAGATGAAGCAAGGGTTAAAGAGTTCAGCCTAAAATCCA TGTGGAAGAGCCCAAACGGCACAATTAGAAATATCCTAAATGGCACTGTGTTCAGAGAAC CAATAATCTGCAAAAACATCCCTCGGCTTGTTCCAGGATGGACTAAGCCCATTTGCATTG GAAGGCACGCATTTGGTGATCAGTACCGTGCAACGGATGCAGTTATCAAGGGACCTGGCA AGCTTAAATTGGTTTATGAGGGAAAAGATGAGGAGATTGAGCTGGAGGTGTTCAACTTCA CTGGTGCTGGAGGAGTGGCACAGTCTATGTACAACACTGACGAGTCCATCCGTTCCTTTG CTGAGGCCTCTATGGCCACTGCTTATGAGAAGAAATGGCCATTGTACCTCAGCACCAAAA ACACAATTTTGAAGAAATATGATGGCAGGTTCAAGGACATCTTCCAGGAGGTATATGAAG CTCAGTGGAAATCAAAATTTGAGGCTGCTGGAATATGGTATGAGCATCGTCTCATTGATG ACATGGTTGCCTATGCACTCAAGAGTGAAGGAGGCTATGTTTGGGCTTGCAAGAACTATG ATGGAGATGTGCAGAGTGATTTCTTAGCACAAGGTTTTGGATCATTGGGTTTGATGACAT CAGTTTTGGTATGTCCTGATGGGAAAACCATTGAAGCTGAAGCTGCCCATGGGACTGTCA CCCGTCATTACCGTGTTCATCAGAAAGGTGGTGAAACTAGCACAAACAGCATTGCCTCAA TCTTTGCCTGGACAAGAGGACTTGCACACAGGGCAAAGCTAGATGACAATGCTAGGCTAC TGGACTTCACTCAGAAGCTTGAAGCTGCCTGCATTGGCGCTGTCGAGTCTGGGAAGATGA CCAAGGACCTTGCTCTGCTTGTTCACGGATCTTCAAATGTCACGAGGAGTCATTACCTGA ACACTGAAGAGTTCATCGATGCTGTTGCTGACGAGCTCAGATCAAGGCTGGCAGCCAACT AAAGCTAATCAAATCAAGTGATTTTGCTGTTATTGATGTGATCCGATGCACTTCGATTAT ACATTTCTAGAACCGCATCATTCGACGTTACAAATATTTTTTTTCTTAATGAATTTTGAA TCACTTGGTAGGTGGAGATTACAAATAAAGTTTCAGAGCTATTCATGAGAAAGCTCCAGA TTC