Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0571100-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:28464165:28465923:1 gene:Os05g0571100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 domain containing protein. (Os05t0571100-01);Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 domain containing protein. (Os05t0571100-02)
Sequence	ATGGACGCCAAGCTGCTCCTCCTCCCCTTCCCCTCGCCGCCGGCCACTCTCCACCACCAC CCGCCGCCCCCCAAATCCCTCTTCCTCGGCGCCTCCCTCCCGCTCCTCCACCCGCCGCCG CCGCTGCGGCTGCTGCGGCCCGGCGCCCCGCGGCGGCTGGCGGTGGTGGCGCAGGCCGCC GTGAAGCGGCGCAAGGAGATCCCGTTCGACAACGTCATCCAGCGCGACAAGAAGCTCAAG CTGGTGCTCAAGCTCCGCAACATCCTCGTCTCCAACCCGGACCGCGTCATGAGCCTCCGC GACCTCGGCCGCTTCCGCCGCGACCTCGGCCTCACCCGCAAGCGCCGCCTCATCGCGCTC CTCAAGCGGTTCCCGGGTGTCTTCGAGGTCGTCGAGGAGGGCGTCTACTCGCTCAGGTTC CGCCTTACCCCGGCCGCCGAGCGCCTCTACCTCGACGAGCTCCACCTCAAGAATGAGTCC GAGGGCCTAGCCGTCACCAAGCTCCGCAAGCTCCTCATGATGTCGCAGGACAAGCGCATC CTCATTGAGAAGATTGCGCACCTCAAGAACGATCTTGGACTCCCGCCGGAGTTCCGCGAC ACTATCTGCCTCAGGTACCCACAGTACTTCCGCGTCGTCCAGATGGACCGAGGGCCAGGG CTGGAGCTCACTCATTGGGACCCTGAATTGGCGGTGTCGGCAGCGGAGGTTGCCGAGGAG GAGAATCGAGCGAGGGAAGAACAAGAGAGGAATCTGATCATTGACCGGCCACTCAAGTTT AATCGGGTGAAGCTACCACAGGGGCTGAAATTATCAAGAGGGGAGGCGCGCAGGGTTGCG CAATTCAAGGAAATGCCATACATTTCGCCGTACTCTGACTTCTCGCATCTGCGATCCGGG TCGGCTGAGAAGGAGAAGCATGCTTGCGGCGTAGTTCATGAGATTTTGAGCCTGACACTT GAGAAGCGCACGCTGGTGGATCATCTGACACACTTCCGGGAGGAATTCCGGTTCTCGCAA TCTCTGCGTGGTATGCTAATTCGCCACCCAGACATGTTTTACGTGTCGCTTAAGGGGGAC AGGGACTCGGTCTTCCTCCGTGAGGCATACAAGAACTCCCAGTTGGTCGAGAAGAGCAAA CTCGTGCTGCTTAAGGAGAAGATGAGGGCTCTTGTTGCAGTCCCACGCTTCCCTAGAAGG GGTGTGCCGGCAACTAGTGAGGAGGCTGATAGAACCAATGGAGCTGCGCAAATGCTGAGT GAAGGAAGCGATGTAGAAGATGATGAAGACGAGGGATTGTCGGATATGGAAGACTTAATT AGTGAGATTTCTGGTGGCAAATCTGACACAGACTACCACTGGGGAGATGGCTGGGTTGGC GAGAATGATGACTCGCCACCAGACTTCGAAGACGATGATGGCTCAAGTCTTAAAGAAGTC AAGGTGACTATGAAGAAAACTGCTAATTCTGCCAATGGCAAGGCACATGTTCCTGTTTTT CCTGATGGCAGACCAAGGGAACGATGGTAA

Peptide Sequence

PEP ID	Os05t0571100-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:28464165:28465923:1 gene:Os05g0571100 transcript:Os05t0571100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 domain containing protein. (Os05t0571100-01);Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 domain containing protein. (Os05t0571100-02)
Sequence	MDAKLLLLPFPSPPATLHHHPPPPKSLFLGASLPLLHPPPPLRLLRPGAPRRLAVVAQAA VKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLIAL LKRFPGVFEVVEEGVYSLRFRLTPAAERLYLDELHLKNESEGLAVTKLRKLLMMSQDKRI LIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWDPELAVSAAEVAEE ENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYISPYSDFSHLRSG SAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRHPDMFYVSLKGD RDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGVPATSEEADRTNGAAQMLS EGSDVEDDEDEGLSDMEDLISEISGGKSDTDYHWGDGWVGENDDSPPDFEDDDGSSLKEV KVTMKKTANSANGKAHVPVFPDGRPRERW

Transcript Sequence

Transcript ID	Os05t0571100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:28464165:28465923:1 gene:Os05g0571100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 domain containing protein. (Os05t0571100-01);Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 domain containing protein. (Os05t0571100-02)
Sequence	GATGCGGGGAGGCTGAGCTCGCAATCCCCAAAGCTCGCGGAGATGGACGCCAAGCTGCTC CTCCTCCCCTTCCCCTCGCCGCCGGCCACTCTCCACCACCACCCGCCGCCCCCCAAATCC CTCTTCCTCGGCGCCTCCCTCCCGCTCCTCCACCCGCCGCCGCCGCTGCGGCTGCTGCGG CCCGGCGCCCCGCGGCGGCTGGCGGTGGTGGCGCAGGCCGCCGTGAAGCGGCGCAAGGAG ATCCCGTTCGACAACGTCATCCAGCGCGACAAGAAGCTCAAGCTGGTGCTCAAGCTCCGC AACATCCTCGTCTCCAACCCGGACCGCGTCATGAGCCTCCGCGACCTCGGCCGCTTCCGC CGCGACCTCGGCCTCACCCGCAAGCGCCGCCTCATCGCGCTCCTCAAGCGGTTCCCGGGT GTCTTCGAGGTCGTCGAGGAGGGCGTCTACTCGCTCAGGTTCCGCCTTACCCCGGCCGCC GAGCGCCTCTACCTCGACGAGCTCCACCTCAAGAATGAGTCCGAGGGCCTAGCCGTCACC AAGCTCCGCAAGCTCCTCATGATGTCGCAGGACAAGCGCATCCTCATTGAGAAGATTGCG CACCTCAAGAACGATCTTGGACTCCCGCCGGAGTTCCGCGACACTATCTGCCTCAGGTAC CCACAGTACTTCCGCGTCGTCCAGATGGACCGAGGGCCAGGGCTGGAGCTCACTCATTGG GACCCTGAATTGGCGGTGTCGGCAGCGGAGGTTGCCGAGGAGGAGAATCGAGCGAGGGAA GAACAAGAGAGGAATCTGATCATTGACCGGCCACTCAAGTTTAATCGGGTGAAGCTACCA CAGGGGCTGAAATTATCAAGAGGGGAGGCGCGCAGGGTTGCGCAATTCAAGGAAATGCCA TACATTTCGCCGTACTCTGACTTCTCGCATCTGCGATCCGGGTCGGCTGAGAAGGAGAAG CATGCTTGCGGCGTAGTTCATGAGATTTTGAGCCTGACACTTGAGAAGCGCACGCTGGTG GATCATCTGACACACTTCCGGGAGGAATTCCGGTTCTCGCAATCTCTGCGTGGTATGCTA ATTCGCCACCCAGACATGTTTTACGTGTCGCTTAAGGGGGACAGGGACTCGGTCTTCCTC CGTGAGGCATACAAGAACTCCCAGTTGGTCGAGAAGAGCAAACTCGTGCTGCTTAAGGAG AAGATGAGGGCTCTTGTTGCAGTCCCACGCTTCCCTAGAAGGGGTGTGCCGGCAACTAGT GAGGAGGCTGATAGAACCAATGGAGCTGCGCAAATGCTGAGTGAAGGAAGCGATGTAGAA GATGATGAAGACGAGGGATTGTCGGATATGGAAGACTTAATTAGTGAGATTTCTGGTGGC AAATCTGACACAGACTACCACTGGGGAGATGGCTGGGTTGGCGAGAATGATGACTCGCCA CCAGACTTCGAAGACGATGATGGCTCAAGTCTTAAAGAAGTCAAGGTGACTATGAAGAAA ACTGCTAATTCTGCCAATGGCAAGGCACATGTTCCTGTTTTTCCTGATGGCAGACCAAGG GAACGATGGTAAAATGATCTATTTTAGATTGTTTGGTAGAGTGTGTAATCTTTGTTGTTA GTTATTTCATCATATCTAGAAAGTCGCAAAACCCTCAGTCCTTTGAGGTGCTGCTTGAAT TTTGTTACCGAGCACATGAATAGCATATCAGAATTTGAACAGTTCACATGAATCATCACT AATATAGTGAACGAATTTG