Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0570400-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:28392188:28397924:1 gene:Os05g0570400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CTP synthase. (Os05t0570400-00)
Sequence

ATGAAGTACGTGGTGGTGATGGGAGGCGTGATCAGCGGCCTCGGCAAGGGGGTGACGGCG
AGCAGCATTGGCGTCGTCCTCAAGGCGTGCGGCCTCCGCGTTACGTCCATTAAGATCGAT
CCTTACTTTAACGCTGATGCCGGAACTATATCTCCTCATGAACACGGCGAAGTGTTTGTG
TTAGATGATGGTGGTGAGGCGGACTTGGATCTTGGGAACTATGAGAGGTTTCTCGACATT
AAACTAACTCGAGACCATAGCATAACCGCCGGGAAGATCCATCATTATGTTTATGAGAAA
GAGAGAAGGGGGGACTACTTGGGTCAGACTGTTCAGGTTATCCCACATATTACAAATGAG
ATACAAGATTGGATTGAGCGTGTCGCGATAGTTCCGGTTGATGGCGAGGTGGATCCTGCC
GATGTCTGTATAATAGAGCTCGGTGGCACTATAGGCGATATTGAATCCACACAATTTATT
GAAGCCTTTAGTCAATTCTCCTATCGTGTTGGTGCTGGTAATTTATGTGTGGTGCACGTC
GGTCTTGTTCCAGTTCTGAACGTTGTGGGTGAGCAGAAAACTAAGCCCACTCAAAATAGT
ATACGTAAGTTAAGAGAATATGGTCTCACGCCAAATATTATAGCTTGCCGTTGTACTAAG
GAACTGGAGAGAAGTGTGAAAGAAAAACTCTCTCTCTTCTGCCATGTGCCGGTAGCTAAC
ATTTTTACTCTGTGTGACGTTTCAAACATCTGGCGTGTTCCTCTGTTATTGCGGGACCAA
AAGGCACATGAAGCTATTCTTAAAGTTTTGAATCTTGAAAGTGTTGCTGGTGAGCCTAAC
TTGGAGGAATGGACGGCAAGGGCTGATCTATATGACACACTACAAGAAACAGTCAGAATT
GCCATGGTTGGAAAATACACCGGTGTATCTGATACATACCTTTCAGTGATGAAGGCTCTT
CTACATGCTTGTATAGCTTGTGGCAGAAAACTTGTTGTTGATTGGGTTCCTTCCACCGAT
CTTGAGGATTCAACTGCCACTGTGGCACCTGATGCTTACAACACAGCATGGAGTTTACTG
AGGGGTGCAGATGGCATTTTAGTACCTGGTGGCTTTGGAGAGAGAGGTGTTGAGGGGAAA
ATATTGGCTGTTAAGTATGCCCGCGAAAACGATGTCCCTTTCCTGGGCATATGCCTTGGC
ATGCAGCTCACTGCGGTTGAATTTGCACGCCATGTTTTGAAATTGCCTGATGCTAACAGC
ACAGAATTTGATGCCAAAACGGAGAATCCATGTGTGACCATAATGCCAGAGTGCTCCAAC
GAAGGAAAGGGTGGTACCATGCGACGTGGATCAAAGAGGATATTTTTCAAGGTTGCAGGT
AGCAAGTCTGCCAAGCTATATGGTAGCGTCAGCCACATAGATGAGAGGTTTCGGCACAGA
TACCAGGTAAATCCCAATATGGTGCAATTATTTGAGAACAGTGGGCTTCAGGTTGTAGGC
ACAGACAAGACCGGAGAAAGGGTGCAGATCGTCGAAATACCCAATCATCGATTTTTCGTT
GGTGTTCAATTTCACCCCGAGTTTAAGTCGAGACCTTCGAAACCTTCTGCACTTTTTGTC
GGACTAATCGCTGCATCGTGTGGGCAACTGGATGATGCGTTGCAAGATGCGGCTTGTAAC
CATGAGCCACAACAGAATCGGCGTGGAGAGAAGCGTCTTGCTGCTAGTGATCTTGGAGAC
GGAACCTGCCGCAGCAAACGGCAAGTGAAGGCGTGCTCTAATTCGAATGACACTGATGAA
GCACAGGATGTTACAACCTGTTAA

Peptide Sequence

PEP ID

Os05t0570400-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:28392188:28397924:1 gene:Os05g0570400 transcript:Os05t0570400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CTP synthase. (Os05t0570400-00)
Sequence

MKYVVVMGGVISGLGKGVTASSIGVVLKACGLRVTSIKIDPYFNADAGTISPHEHGEVFV
LDDGGEADLDLGNYERFLDIKLTRDHSITAGKIHHYVYEKERRGDYLGQTVQVIPHITNE
IQDWIERVAIVPVDGEVDPADVCIIELGGTIGDIESTQFIEAFSQFSYRVGAGNLCVVHV
GLVPVLNVVGEQKTKPTQNSIRKLREYGLTPNIIACRCTKELERSVKEKLSLFCHVPVAN
IFTLCDVSNIWRVPLLLRDQKAHEAILKVLNLESVAGEPNLEEWTARADLYDTLQETVRI
AMVGKYTGVSDTYLSVMKALLHACIACGRKLVVDWVPSTDLEDSTATVAPDAYNTAWSLL
RGADGILVPGGFGERGVEGKILAVKYARENDVPFLGICLGMQLTAVEFARHVLKLPDANS
TEFDAKTENPCVTIMPECSNEGKGGTMRRGSKRIFFKVAGSKSAKLYGSVSHIDERFRHR
YQVNPNMVQLFENSGLQVVGTDKTGERVQIVEIPNHRFFVGVQFHPEFKSRPSKPSALFV
GLIAASCGQLDDALQDAACNHEPQQNRRGEKRLAASDLGDGTCRSKRQVKACSNSNDTDE
AQDVTTC

Transcript Sequence

Transcript ID

Os05t0570400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:28392188:28397924:1 gene:Os05g0570400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CTP synthase. (Os05t0570400-00)
Sequence

GATGAAGTACGTGGTGGTGATGGGAGGCGTGATCAGCGGCCTCGGCAAGGGGGTGACGGC
GAGCAGCATTGGCGTCGTCCTCAAGGCGTGCGGCCTCCGCGTTACGTCCATTAAGATCGA
TCCTTACTTTAACGCTGATGCCGGAACTATATCTCCTCATGAACACGGCGAAGTGTTTGT
GTTAGATGATGGTGGTGAGGCGGACTTGGATCTTGGGAACTATGAGAGGTTTCTCGACAT
TAAACTAACTCGAGACCATAGCATAACCGCCGGGAAGATCCATCATTATGTTTATGAGAA
AGAGAGAAGGGGGGACTACTTGGGTCAGACTGTTCAGGTTATCCCACATATTACAAATGA
GATACAAGATTGGATTGAGCGTGTCGCGATAGTTCCGGTTGATGGCGAGGTGGATCCTGC
CGATGTCTGTATAATAGAGCTCGGTGGCACTATAGGCGATATTGAATCCACACAATTTAT
TGAAGCCTTTAGTCAATTCTCCTATCGTGTTGGTGCTGGTAATTTATGTGTGGTGCACGT
CGGTCTTGTTCCAGTTCTGAACGTTGTGGGTGAGCAGAAAACTAAGCCCACTCAAAATAG
TATACGTAAGTTAAGAGAATATGGTCTCACGCCAAATATTATAGCTTGCCGTTGTACTAA
GGAACTGGAGAGAAGTGTGAAAGAAAAACTCTCTCTCTTCTGCCATGTGCCGGTAGCTAA
CATTTTTACTCTGTGTGACGTTTCAAACATCTGGCGTGTTCCTCTGTTATTGCGGGACCA
AAAGGCACATGAAGCTATTCTTAAAGTTTTGAATCTTGAAAGTGTTGCTGGTGAGCCTAA
CTTGGAGGAATGGACGGCAAGGGCTGATCTATATGACACACTACAAGAAACAGTCAGAAT
TGCCATGGTTGGAAAATACACCGGTGTATCTGATACATACCTTTCAGTGATGAAGGCTCT
TCTACATGCTTGTATAGCTTGTGGCAGAAAACTTGTTGTTGATTGGGTTCCTTCCACCGA
TCTTGAGGATTCAACTGCCACTGTGGCACCTGATGCTTACAACACAGCATGGAGTTTACT
GAGGGGTGCAGATGGCATTTTAGTACCTGGTGGCTTTGGAGAGAGAGGTGTTGAGGGGAA
AATATTGGCTGTTAAGTATGCCCGCGAAAACGATGTCCCTTTCCTGGGCATATGCCTTGG
CATGCAGCTCACTGCGGTTGAATTTGCACGCCATGTTTTGAAATTGCCTGATGCTAACAG
CACAGAATTTGATGCCAAAACGGAGAATCCATGTGTGACCATAATGCCAGAGTGCTCCAA
CGAAGGAAAGGGTGGTACCATGCGACGTGGATCAAAGAGGATATTTTTCAAGGTTGCAGG
TAGCAAGTCTGCCAAGCTATATGGTAGCGTCAGCCACATAGATGAGAGGTTTCGGCACAG
ATACCAGGTAAATCCCAATATGGTGCAATTATTTGAGAACAGTGGGCTTCAGGTTGTAGG
CACAGACAAGACCGGAGAAAGGGTGCAGATCGTCGAAATACCCAATCATCGATTTTTCGT
TGGTGTTCAATTTCACCCCGAGTTTAAGTCGAGACCTTCGAAACCTTCTGCACTTTTTGT
CGGACTAATCGCTGCATCGTGTGGGCAACTGGATGATGCGTTGCAAGATGCGGCTTGTAA
CCATGAGCCACAACAGAATCGGCGTGGAGAGAAGCGTCTTGCTGCTAGTGATCTTGGAGA
CGGAACCTGCCGCAGCAAACGGCAAGTGAAGGCGTGCTCTAATTCGAATGACACTGATGA
AGCACAGGATGTTACAACCTGTTAA