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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0569200-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:28329422:28330634:1 gene:Os05g0569200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3143 domain containing protein. (Os05t0569200-01)
Sequence

ATGTCGATTGCTCCGTCGAGCTCGCTCCGTGCCCTGGTCGTCCCCATCCTCCCCTCCGTC
TCCTCCTCGCCCTCTGCTCGCCCAGGGCTCCGCGGAGTGGCGGCACCGGTGCAGCACGCG
CGGGCGCGGCGGCGGAGGGGGGCGGCGGTCGTGGCGCGGGCGGCGGCGCTGCCGTCGGAC
GCCGAGTGGCTGGAGCGGCTGCCGGAGAAGAAGAAGCCGCTGTACACGCACAGCCTGCCG
TGCATCGAGGCGTGGCTGCGCAGCATCGGGTTCTCCCAGACCCGCGAGGACCGCGCCGTC
TGGGTCGCCGAGATGCCCCTCTGGCACGCCCGCCTCAGCCTCGACGTCACTGACCTCCAC
ATCAGGTACTTGAAGAGCGGCCCTGGGAATCTTGACAAGGACGTAGAGAGGAGATTCAGC
TATGCCCTTAGCAGAGAAGACATCGAGAACGCAATACTTGGAGGACCTTAA

Peptide Sequence

PEP ID

Os05t0569200-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:28329422:28330634:1 gene:Os05g0569200 transcript:Os05t0569200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3143 domain containing protein. (Os05t0569200-01)
Sequence

MSIAPSSSLRALVVPILPSVSSSPSARPGLRGVAAPVQHARARRRRGAAVVARAAALPSD
AEWLERLPEKKKPLYTHSLPCIEAWLRSIGFSQTREDRAVWVAEMPLWHARLSLDVTDLH
IRYLKSGPGNLDKDVERRFSYALSREDIENAILGGP

Transcript Sequence

Transcript ID

Os05t0569200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:28329422:28330634:1 gene:Os05g0569200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3143 domain containing protein. (Os05t0569200-01)
Sequence

GGGAGGCCGTAGCCCGTAGCGACCATGTCGATTGCTCCGTCGAGCTCGCTCCGTGCCCTG
GTCGTCCCCATCCTCCCCTCCGTCTCCTCCTCGCCCTCTGCTCGCCCAGGGCTCCGCGGA
GTGGCGGCACCGGTGCAGCACGCGCGGGCGCGGCGGCGGAGGGGGGCGGCGGTCGTGGCG
CGGGCGGCGGCGCTGCCGTCGGACGCCGAGTGGCTGGAGCGGCTGCCGGAGAAGAAGAAG
CCGCTGTACACGCACAGCCTGCCGTGCATCGAGGCGTGGCTGCGCAGCATCGGGTTCTCC
CAGACCCGCGAGGACCGCGCCGTCTGGGTCGCCGAGATGCCCCTCTGGCACGCCCGCCTC
AGCCTCGACGTCACTGACCTCCACATCAGGTACTTGAAGAGCGGCCCTGGGAATCTTGAC
AAGGACGTAGAGAGGAGATTCAGCTATGCCCTTAGCAGAGAAGACATCGAGAACGCAATA
CTTGGAGGACCTTAATCTCATCAGGCCATCAGAGGCTCAAGATTAGAAGTTCTTGCAGGA
TCTTAGCTTATGGGCAGCGCAGTAGGTGCATGCTCTTTCATGAGTGACTAAGAAAAGCTC
TGCCCTGCTGCTGATTGGTCGTTCGACGTCCATCAGGAAGGAGCTTTGCTTAAGTTCCCT
TCAGTCATTTGTACAAGAGAAAATTAATTATGTATCTCAATTTCATTTGTAATAATTCAA
TGTGCTTAAGGATGAGACGTCCAGCTG