Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0568600-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:28307089:28308038:1 gene:Os05g0568600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1645 family protein. (Os05t0568600-01)
Sequence

ATGGCGGAGGCGGACGGCGACCGTGGCGTCGCTGCCGCCGCCGCCGCCGCCGCCGTCGTC
CACGACGACGTCCTAGAGTCTGACGAGGAGGACTTCACCTTCGCGGCGGCGGCGGCTGTC
ACGTGTGTGGTTGGAGGCGGCCGCATCGGCGCTGTCGTGTACCCGGTCTTCGGCCGCCCG
CGGTCGCCGCCGCCGGTGCAGGAGGTGGAGGAGCCTGACACGGCCACCGTGCGGGTGCCG
CTGGGGCAGCTTCTGCTGGAGGAGAGGGCGTCGGCGCCGCCGTCGGGGGAGCAGGCCGAC
GAGGATGGCGTTCTTGACGGCGTGCCGGCGGAGACGTACTGCCTGTGGTCGCCCGGATCA
CCCGCGCCGGCGGTTTCTAACTCTCCGGCGAGGTGCCAGAAGAGCGGCTCGACCGGGTCG
GTCCTCCGGTGGCGGCAGCGGCTCATCGGGCGGAGCCACAGCGACGGGAAGGAGAAGTTC
GTGTTCTTGAGCTCGGGCTCCGACGTCCGTAGTAAGGGGAGGACGACCACGACGTCGCGC
GGCGATGCCGGTGGCCGTGGCGGCGGCTGGAGATATTACGCGAGTGGAGGCGGCAATGGC
GGTGGCCGGAGGCCGTCGTTCCTCCCGTACAAGCAGGATCTCGTCGGCTTGTTCGCCAAC
GCCGGCGCGTTCCGCCGGAGCTACCACCCGTTCTAA

Peptide Sequence

PEP ID

Os05t0568600-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:28307089:28308038:1 gene:Os05g0568600 transcript:Os05t0568600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1645 family protein. (Os05t0568600-01)
Sequence

MAEADGDRGVAAAAAAAAVVHDDVLESDEEDFTFAAAAAVTCVVGGGRIGAVVYPVFGRP
RSPPPVQEVEEPDTATVRVPLGQLLLEERASAPPSGEQADEDGVLDGVPAETYCLWSPGS
PAPAVSNSPARCQKSGSTGSVLRWRQRLIGRSHSDGKEKFVFLSSGSDVRSKGRTTTTSR
GDAGGRGGGWRYYASGGGNGGGRRPSFLPYKQDLVGLFANAGAFRRSYHPF

Transcript Sequence

Transcript ID

Os05t0568600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:28307089:28308038:1 gene:Os05g0568600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1645 family protein. (Os05t0568600-01)
Sequence

AGCTCGCGCCACAGAAAAACTCCACCACCACCAGCCACGCCATGGCGGAGGCGGACGGCG
ACCGTGGCGTCGCTGCCGCCGCCGCCGCCGCCGCCGTCGTCCACGACGACGTCCTAGAGT
CTGACGAGGAGGACTTCACCTTCGCGGCGGCGGCGGCTGTCACGTGTGTGGTTGGAGGCG
GCCGCATCGGCGCTGTCGTGTACCCGGTCTTCGGCCGCCCGCGGTCGCCGCCGCCGGTGC
AGGAGGTGGAGGAGCCTGACACGGCCACCGTGCGGGTGCCGCTGGGGCAGCTTCTGCTGG
AGGAGAGGGCGTCGGCGCCGCCGTCGGGGGAGCAGGCCGACGAGGATGGCGTTCTTGACG
GCGTGCCGGCGGAGACGTACTGCCTGTGGTCGCCCGGATCACCCGCGCCGGCGGTTTCTA
ACTCTCCGGCGAGGTGCCAGAAGAGCGGCTCGACCGGGTCGGTCCTCCGGTGGCGGCAGC
GGCTCATCGGGCGGAGCCACAGCGACGGGAAGGAGAAGTTCGTGTTCTTGAGCTCGGGCT
CCGACGTCCGTAGTAAGGGGAGGACGACCACGACGTCGCGCGGCGATGCCGGTGGCCGTG
GCGGCGGCTGGAGATATTACGCGAGTGGAGGCGGCAATGGCGGTGGCCGGAGGCCGTCGT
TCCTCCCGTACAAGCAGGATCTCGTCGGCTTGTTCGCCAACGCCGGCGCGTTCCGCCGGA
GCTACCACCCGTTCTAACGTATTGTAGCGTTCTTTCTCGCTGATCGTTTGCTTAATTAAT
TCCTTAATTATATATATTTTTGTCAAGTCATGGTGTGACTTCGGATTGCCTTGTGGTAGA
ACTGAAGTGTGACAGATTTGTAGTAGCAGAAAATCTTTATGCAGATTTTTTTTGTATGTG
GGTAATACTAATACTTATGTATATATCGTGGATTTTGTATTGGTTTGATC