Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0567400-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:28245031:28249577:1 gene:Os05g0567400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal RNA methyltransferase J domain containing protein. (Os05t0567400-01)
Sequence	ATGGGGAAGACGAAGGGGAAGCAGCGGCAGGACAAGTTCTACCACCTCGCCAAGGAGCAG GGGTACCGGAGCCGCGCGGCCTTCAAGCTGCTCCAGCTCGACGCGCGGTTCCGCTTCCTG CCGACGGCGCGCGCGGTGCTCGACCTCTGCGCGGCGCCCGGGGGATGGGTCCAGGTGGCC GTCAACCACGCGCCCGTGGGGGCCTTCGTCGTCGGCGTCGACCTCGTCCCCATCCGCCCC ATCCGCGGCGCGCACTCCCTCACGGAGGACATCACCACCACCAAGTGCCGCGCCGCCGTG CGGAGGCTCATGGACTCCAACGGCGTCGCCGCGTTCGACGTCGTGCTCCACGACGGGTCC CCCAACGTCGGTGGCGCGTGGGCGCAGGAGGCCACCGCGCAATCGTCGCTCGTCATCGAC GCCGTGCGCCTCGCCACCATGTTCCTCGCCCCCAAGGGTGCCTTCATCACTAAGGTTTTC AGGTCTCAGGATTACAACGCTATTATGTACTGTCTTAAACAGTTATTTGAGAAGGTTGAA GTCACTAAACCTACTGCAAGTCGTTCTACGTCTGCAGAAATTTATATTATCTGTCTGAGA TATAAAGCTCCTGCAAAGATTCAGCCAGAACTTTTGGATATAAAGCATTTGTTCAGTGTG GATCCAGATCCTAAAAAGGTTAGGGATCCTCTCAAGCCGGACAGACAGAAGAGGAACCGT GATGGATACGAAGAAGGAAATACAACATTGCGAAAAGTTGGTCTGGCTTCAGATTTTATA TGGTCTGAGGGCCAAACGCCCCTAGAGTTTCTTGGTTCTTTTAATGCAATTTCATTTGAT GACCCAGCATCTCTTCCTATCAAGAACCATGAGCTTACTACAGATGAGATAAAAGCTCTT TGTGAGGATTTGTATGTACTGGACAAAAACAGCTTCAAGCATATCTTGAAATGGCGGATA CGCATACGGAAAGCACTATCATCTTCTGAAGTCACTAAAAAAACTGATGATACTGCGGTG GAAGTCAATGTCAAGGATGATGACCAACTTCTACAGGAAATGGAAGAATTGACGAGTGTC ATTGATAGAAAGAAGAAGAGAGAAAAGAAGCGTCAATCAAAGCGCCGTGCAAAGGATAAA GCACGCAAAGCAACAGGAATGCAAATAGATGCTACAGGAGATAATTACGGCGATCCTGAT TTGTTTTCTATAAGTGCTATCAAGGGCGGAAAAGAACTCCAAGCTATTGAATCGGCTGAG CTTAATGTAGAAGATGCCCAAGGAGATAGTGAGAATGAGGATATTCAAACTCGTGAATAC TCTGATGAGGAAATGGATTCTGACGAAGAACAGCAGAGGTATGATGCCCAACTTGAGGAA ATGCTTGATGAAGCTTATGAGCGTTATGTAACTAAAAAGGGTGGTGAAGTGAAACAAGAA CGCAAGCGTGCAAAACGAGTAAATACTGATGCTGATGAAGAATTATTAGAGGGAGGTGAA GATGACGGTGACGATGTTGACATGGATCAAGGTTCTGATGAAGAGCAAGATCAAGAGACC AATCCCCTTTTATTATCCCTAGATGCAGAGAAACCAACAAAAGAGCAGATGATGGAGCAG TGGTTCAGCCAGGATGTATTCACAGAAGCAGGAACAGGTGTGGTTGAGCAGAGTGATAGT GAAGATGAAAGAGAGCAGCTAACTAGGATTGCAAAAAAGAAGGCGGATTCTGGAAAGAAG GAAAAGTCTGCTAAAGCAAAACACTTGCAACAGGACGATTTTGAGATTGTGCCAGCAGAA CCAGTCCGAACTGAAGATGACTCATCTTCATCTTCTGATGAGTCTGATGAACTAGATGAG GACCTCGACGATGACACAAAAGCTGAAGTACTAGCCTATGCAAGGAAGATGTTGAGGAAG AAACAGAGAGAGCAGATACTTGACGACGCTTACAACAAGTACATGTTTGACGACGAGGGT TTACCTAAATGGTTTGCTGAGGATGAAAAGAGGCATAACCAGCCTATGAAGCCTGTAACA AAAGAGGAGGTAGCTGCCATGAGGGCTCAGTTCAAGGAGATCGATGCTCGGCCAGCCAAG AAGGTCGCTGAGGCTAAGGCTCGGAAGAAGCGCGTCGCCATGAAGAAGCTGGATAAGGCG CGCCAGAAGGCAGATGCCATCGCAGATCAAAACGACATAAACGAGCAGTCAAAGAGGAAG ATGATCGACAGGATTTACAAGAAGGCGATTCCAAAGAAGCCCCAGAAGGAGTACGTTGTC GCAAAGAAGGGCGTTCAGGTGAGGGCTGGCAAAGGGAAGATACTGGTGGATAAGCGTATG AAGAAGGACAAGAGGGCCAGCAAAGTGAAGGGTGGCAAAGGAGCTAAGGGCAAGGGGAAG AAGGGCGGCGGCCAGAAAGGCGGTATGCGAGGGAAAGCTGGGAGGAAAGCCCAAAACTGA

Peptide Sequence

PEP ID	Os05t0567400-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:28245031:28249577:1 gene:Os05g0567400 transcript:Os05t0567400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal RNA methyltransferase J domain containing protein. (Os05t0567400-01)
Sequence	MGKTKGKQRQDKFYHLAKEQGYRSRAAFKLLQLDARFRFLPTARAVLDLCAAPGGWVQVA VNHAPVGAFVVGVDLVPIRPIRGAHSLTEDITTTKCRAAVRRLMDSNGVAAFDVVLHDGS PNVGGAWAQEATAQSSLVIDAVRLATMFLAPKGAFITKVFRSQDYNAIMYCLKQLFEKVE VTKPTASRSTSAEIYIICLRYKAPAKIQPELLDIKHLFSVDPDPKKVRDPLKPDRQKRNR DGYEEGNTTLRKVGLASDFIWSEGQTPLEFLGSFNAISFDDPASLPIKNHELTTDEIKAL CEDLYVLDKNSFKHILKWRIRIRKALSSSEVTKKTDDTAVEVNVKDDDQLLQEMEELTSV IDRKKKREKKRQSKRRAKDKARKATGMQIDATGDNYGDPDLFSISAIKGGKELQAIESAE LNVEDAQGDSENEDIQTREYSDEEMDSDEEQQRYDAQLEEMLDEAYERYVTKKGGEVKQE RKRAKRVNTDADEELLEGGEDDGDDVDMDQGSDEEQDQETNPLLLSLDAEKPTKEQMMEQ WFSQDVFTEAGTGVVEQSDSEDEREQLTRIAKKKADSGKKEKSAKAKHLQQDDFEIVPAE PVRTEDDSSSSSDESDELDEDLDDDTKAEVLAYARKMLRKKQREQILDDAYNKYMFDDEG LPKWFAEDEKRHNQPMKPVTKEEVAAMRAQFKEIDARPAKKVAEAKARKKRVAMKKLDKA RQKADAIADQNDINEQSKRKMIDRIYKKAIPKKPQKEYVVAKKGVQVRAGKGKILVDKRM KKDKRASKVKGGKGAKGKGKKGGGQKGGMRGKAGRKAQN

Transcript Sequence

Transcript ID	Os05t0567400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:28245031:28249577:1 gene:Os05g0567400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal RNA methyltransferase J domain containing protein. (Os05t0567400-01)
Sequence	AAAACCCTAGCGCTCTCTCTCTCTCCCCCCCCACCCTCCCTTCGCCTATAGCTGAGGCGG CGGCTCGTCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGGCAGCAATGGG GAAGACGAAGGGGAAGCAGCGGCAGGACAAGTTCTACCACCTCGCCAAGGAGCAGGGGTA CCGGAGCCGCGCGGCCTTCAAGCTGCTCCAGCTCGACGCGCGGTTCCGCTTCCTGCCGAC GGCGCGCGCGGTGCTCGACCTCTGCGCGGCGCCCGGGGGATGGGTCCAGGTGGCCGTCAA CCACGCGCCCGTGGGGGCCTTCGTCGTCGGCGTCGACCTCGTCCCCATCCGCCCCATCCG CGGCGCGCACTCCCTCACGGAGGACATCACCACCACCAAGTGCCGCGCCGCCGTGCGGAG GCTCATGGACTCCAACGGCGTCGCCGCGTTCGACGTCGTGCTCCACGACGGGTCCCCCAA CGTCGGTGGCGCGTGGGCGCAGGAGGCCACCGCGCAATCGTCGCTCGTCATCGACGCCGT GCGCCTCGCCACCATGTTCCTCGCCCCCAAGGGTGCCTTCATCACTAAGGTTTTCAGGTC TCAGGATTACAACGCTATTATGTACTGTCTTAAACAGTTATTTGAGAAGGTTGAAGTCAC TAAACCTACTGCAAGTCGTTCTACGTCTGCAGAAATTTATATTATCTGTCTGAGATATAA AGCTCCTGCAAAGATTCAGCCAGAACTTTTGGATATAAAGCATTTGTTCAGTGTGGATCC AGATCCTAAAAAGGTTAGGGATCCTCTCAAGCCGGACAGACAGAAGAGGAACCGTGATGG ATACGAAGAAGGAAATACAACATTGCGAAAAGTTGGTCTGGCTTCAGATTTTATATGGTC TGAGGGCCAAACGCCCCTAGAGTTTCTTGGTTCTTTTAATGCAATTTCATTTGATGACCC AGCATCTCTTCCTATCAAGAACCATGAGCTTACTACAGATGAGATAAAAGCTCTTTGTGA GGATTTGTATGTACTGGACAAAAACAGCTTCAAGCATATCTTGAAATGGCGGATACGCAT ACGGAAAGCACTATCATCTTCTGAAGTCACTAAAAAAACTGATGATACTGCGGTGGAAGT CAATGTCAAGGATGATGACCAACTTCTACAGGAAATGGAAGAATTGACGAGTGTCATTGA TAGAAAGAAGAAGAGAGAAAAGAAGCGTCAATCAAAGCGCCGTGCAAAGGATAAAGCACG CAAAGCAACAGGAATGCAAATAGATGCTACAGGAGATAATTACGGCGATCCTGATTTGTT TTCTATAAGTGCTATCAAGGGCGGAAAAGAACTCCAAGCTATTGAATCGGCTGAGCTTAA TGTAGAAGATGCCCAAGGAGATAGTGAGAATGAGGATATTCAAACTCGTGAATACTCTGA TGAGGAAATGGATTCTGACGAAGAACAGCAGAGGTATGATGCCCAACTTGAGGAAATGCT TGATGAAGCTTATGAGCGTTATGTAACTAAAAAGGGTGGTGAAGTGAAACAAGAACGCAA GCGTGCAAAACGAGTAAATACTGATGCTGATGAAGAATTATTAGAGGGAGGTGAAGATGA CGGTGACGATGTTGACATGGATCAAGGTTCTGATGAAGAGCAAGATCAAGAGACCAATCC CCTTTTATTATCCCTAGATGCAGAGAAACCAACAAAAGAGCAGATGATGGAGCAGTGGTT CAGCCAGGATGTATTCACAGAAGCAGGAACAGGTGTGGTTGAGCAGAGTGATAGTGAAGA TGAAAGAGAGCAGCTAACTAGGATTGCAAAAAAGAAGGCGGATTCTGGAAAGAAGGAAAA GTCTGCTAAAGCAAAACACTTGCAACAGGACGATTTTGAGATTGTGCCAGCAGAACCAGT CCGAACTGAAGATGACTCATCTTCATCTTCTGATGAGTCTGATGAACTAGATGAGGACCT CGACGATGACACAAAAGCTGAAGTACTAGCCTATGCAAGGAAGATGTTGAGGAAGAAACA GAGAGAGCAGATACTTGACGACGCTTACAACAAGTACATGTTTGACGACGAGGGTTTACC TAAATGGTTTGCTGAGGATGAAAAGAGGCATAACCAGCCTATGAAGCCTGTAACAAAAGA GGAGGTAGCTGCCATGAGGGCTCAGTTCAAGGAGATCGATGCTCGGCCAGCCAAGAAGGT CGCTGAGGCTAAGGCTCGGAAGAAGCGCGTCGCCATGAAGAAGCTGGATAAGGCGCGCCA GAAGGCAGATGCCATCGCAGATCAAAACGACATAAACGAGCAGTCAAAGAGGAAGATGAT CGACAGGATTTACAAGAAGGCGATTCCAAAGAAGCCCCAGAAGGAGTACGTTGTCGCAAA GAAGGGCGTTCAGGTGAGGGCTGGCAAAGGGAAGATACTGGTGGATAAGCGTATGAAGAA GGACAAGAGGGCCAGCAAAGTGAAGGGTGGCAAAGGAGCTAAGGGCAAGGGGAAGAAGGG CGGCGGCCAGAAAGGCGGTATGCGAGGGAAAGCTGGGAGGAAAGCCCAAAACTGAGTAGC AATAGAGCATGACTGAATTTTCTACTGAATTTTTGTTCAGTGGCTCTACTGCTCAATTTT TGTTTACTTATAACTTACCGAATTCATATGTACGGAATTTTTAAATGCGTGAATTATCAG TTGTCTCGTCAGATTATATTTTCAGTCCCATCGTTTTTTAAGCCTACAACTGATT