Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0567100-03
CDS Infomation	cds chromosome:IRGSP-1.0:5:28234864:28237325:1 gene:Os05g0567100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Oryzasin, Oryzasin 1 description:Aspartic proteinase oryzasin 1 precursor (EC 3.4.23.-). (Os05t0567100-01);Aspartic proteinase oryzasin 1 precursor (EC 3.4.23.-). (Os05t0567100-02);Similar to Phytepsin. (Os05t0567100-03)
Sequence	ATGGATCCTAGCCACTACAAGGGCAACCATACATATGTTCCAGTCTCTCAGAAGGGATAT TGGCAGTTTGAGATGGGCGATGTCCTGATTGGAGGAAAGACCACAGGATTTTGTGCTAGC GGTTGTTCAGCTATAGCAGACTCTGGAACATCATTGCTTGCTGGCCCCACAGCCATAATC ACTGAAATCAATGAGAAGATCGGTGCTACTGGGGTAGTCAGCCAAGAATGCAAGACAGTT GTTTCTCAATATGGACAACAGATCCTAGATCTGTTGCTTGCTGAGACACAGCCATCAAAA ATCTGCTCTCAGGTTGGTCTGTGTACTTTTGATGGGAAGCATGGTGTTAGTGCTGGAATT AAGAGCGTAGTAGATGATGAAGCTGGGGAATCGAATGGTCTCCAAAGTGGTCCCATGTGC AATGCCTGTGAGATGGCTGTTGTATGGATGCAGAACCAACTTGCACAGAACAAGACTCAG GATCTCATCTTGAACTACATTAATCAGCTCTGTGACAAGCTCCCAAGTCCAATGGGAGAA TCATCTGTGGACTGTGGCAGCCTTGCATCCATGCCTGAGATTTCATTCACCATTGGAGGC AAAAAGTTTGCACTGAAGCCAGAAGAGTATATTCTGAAGGTTGGTGAAGGAGCTGCTGCC CAGTGCATCAGTGGATTCACAGCCATGGACATCCCTCCTCCCCGTGGTCCTCTCTGGATC CTGGGTGACGTTTTCATGGGTGCCTACCATACCGTGTTCGACTACGGCAAGATGAGGGTT GGCTTCGCGAAGTCGGCCTAA

Peptide Sequence

PEP ID	Os05t0567100-03
PEP Infomation	pep chromosome:IRGSP-1.0:5:28234864:28237325:1 gene:Os05g0567100 transcript:Os05t0567100-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Oryzasin, Oryzasin 1 description:Aspartic proteinase oryzasin 1 precursor (EC 3.4.23.-). (Os05t0567100-01);Aspartic proteinase oryzasin 1 precursor (EC 3.4.23.-). (Os05t0567100-02);Similar to Phytepsin. (Os05t0567100-03)
Sequence	MDPSHYKGNHTYVPVSQKGYWQFEMGDVLIGGKTTGFCASGCSAIADSGTSLLAGPTAII TEINEKIGATGVVSQECKTVVSQYGQQILDLLLAETQPSKICSQVGLCTFDGKHGVSAGI KSVVDDEAGESNGLQSGPMCNACEMAVVWMQNQLAQNKTQDLILNYINQLCDKLPSPMGE SSVDCGSLASMPEISFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWI LGDVFMGAYHTVFDYGKMRVGFAKSA

Transcript Sequence

Transcript ID	Os05t0567100-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:28234864:28237325:1 gene:Os05g0567100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Oryzasin, Oryzasin 1 description:Aspartic proteinase oryzasin 1 precursor (EC 3.4.23.-). (Os05t0567100-01);Aspartic proteinase oryzasin 1 precursor (EC 3.4.23.-). (Os05t0567100-02);Similar to Phytepsin. (Os05t0567100-03)
Sequence	AATGGATCCTAGCCACTACAAGGGCAACCATACATATGTTCCAGTCTCTCAGAAGGGATA TTGGCAGTTTGAGATGGGCGATGTCCTGATTGGAGGAAAGACCACAGGATTTTGTGCTAG CGGTTGTTCAGCTATAGCAGACTCTGGAACATCATTGCTTGCTGGCCCCACAGCCATAAT CACTGAAATCAATGAGAAGATCGGTGCTACTGGGGTAGTCAGCCAAGAATGCAAGACAGT TGTTTCTCAATATGGACAACAGATCCTAGATCTGTTGCTTGCTGAGACACAGCCATCAAA AATCTGCTCTCAGGTTGGTCTGTGTACTTTTGATGGGAAGCATGGTGTTAGTGCTGGAAT TAAGAGCGTAGTAGATGATGAAGCTGGGGAATCGAATGGTCTCCAAAGTGGTCCCATGTG CAATGCCTGTGAGATGGCTGTTGTATGGATGCAGAACCAACTTGCACAGAACAAGACTCA GGATCTCATCTTGAACTACATTAATCAGCTCTGTGACAAGCTCCCAAGTCCAATGGGAGA ATCATCTGTGGACTGTGGCAGCCTTGCATCCATGCCTGAGATTTCATTCACCATTGGAGG CAAAAAGTTTGCACTGAAGCCAGAAGAGTATATTCTGAAGGTTGGTGAAGGAGCTGCTGC CCAGTGCATCAGTGGATTCACAGCCATGGACATCCCTCCTCCCCGTGGTCCTCTCTGGAT CCTGGGTGACGTTTTCATGGGTGCCTACCATACCGTGTTCGACTACGGCAAGATGAGGGT TGGCTTCGCGAAGTCGGCCTAAACGTGTTGTTGTCACGTTCCTAATGACGAGGTGGACGC ATACGCCGAGAGAAGAAGACCGTAGCTTTTAACTAGCGTATTTATCCGGCGATGTGTGTA TATATGCATGCTACATAACATGTTTATGTTTTCCAAGGCCTGAGATGGCGCCCGTCTATT TTAGCTTGGCAAGAATATCTCGGACCAGTCTCTGTTCGAATTCTCGTACTGATATGTGAA CTTCTGATAACATGTGCACTGTGTTTTGTGACTGAATTGCTAGTCAGTCCGAAGGTTAAT TATCCC