Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0564200-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:28080214:28082860:1 gene:Os05g0564200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 38 description:U2 snRNP auxiliary factor, small subunit. (Os05t0564200-01)
Sequence	ATGGCGGAGCATTTGGCTTCAATATTTGGGACTGAGAAGGATAGGGTTAACTGCCCCTTT TACTTCAAGATTGGGGCTTGCCGTCATGGGGATCGTTGCTCCCGTCTGCACAACAGGCCA ACTGTGTCGCCGACAATTGTGCTTGCTAACATGTATCAGCGCCCTGATATGATCACACCA GGAGTCGATGCTCAAGGCCAACCTATTGATCCTGAAAAGATGCAGGAGCACTTTGAGGAT TTCTATGAGGATATCTATGAGGAGCTGAGCAAGTTTGGTGAGGTTGAGACCCTCAATGTC TGTGATAACCTTGCTGACCACATGATAGGCAATGTGTATGTCCAGTTCAGGGAGGAAGAA CAGGCAGTCGCTGCGCATAATGCCCTTCAAGGTCGCTTCTACTCAGGGCGCCCAATAATT GTTGAGTATTCCCCTGTGACTGATTTCCGTGAGGCGACCTGTAGGCAGTTTGAGGAGAAC AGCTGCAACCGTGGGGGCTACTGTAATTTTATGCATGTAAAGCAGATTGGCAGGGAGCTC AGGAGGAAGCTTTATGGGGGGCGATCCAGGAGGAGCCATGGGAGAAGCCGCAGCCCAAGC CCACGCCACAGGAGGGGCAATCGTGACCGTGATGATTTCCGCCGTGAACGTGATGGTTAT CGTGGTGGTGGTGATGGTTACCGTGGCGGCGGCGGTGGCGGTGGTGGTGACGGTTACCGC GGCGGTGATAGTTACCGTGGTGGTGGTGGTGGTGGACGCAGGGGTGGGGGCAGCAGGTAT GACAGGTATGATGATGGAGGAAGGCGCAGGCATGGCAGCCCCCCAAGGCGTGCAAGGAGC CCAGTCAGGGAAAGCAGCGAGGAACGCAGGGCGAAGATTGAACAGTGGAACCGTGAACGG GAGGAAAAGCCTTGA

Peptide Sequence

PEP ID	Os05t0564200-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:28080214:28082860:1 gene:Os05g0564200 transcript:Os05t0564200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 38 description:U2 snRNP auxiliary factor, small subunit. (Os05t0564200-01)
Sequence	MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITP GVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL RRKLYGGRSRRSHGRSRSPSPRHRRGNRDRDDFRRERDGYRGGGDGYRGGGGGGGGDGYR GGDSYRGGGGGGRRGGGSRYDRYDDGGRRRHGSPPRRARSPVRESSEERRAKIEQWNRER EEKP

Transcript Sequence

Transcript ID	Os05t0564200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:28080214:28082860:1 gene:Os05g0564200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 38 description:U2 snRNP auxiliary factor, small subunit. (Os05t0564200-01)
Sequence	GGACTCTCCCGATCCTTCCCCAACTCGGCGTCGCGCCGCCTCAACCGAAGCAAGGAGCAA AGCGGGGATTCAGAACGGGAAGGAGAAGGTCCGGTTCGTCCGCTCTCGAGCTCAAGTGTC AGTTGAAGTGTTTTGAAAGTCATGGCGGAGCATTTGGCTTCAATATTTGGGACTGAGAAG GATAGGGTTAACTGCCCCTTTTACTTCAAGATTGGGGCTTGCCGTCATGGGGATCGTTGC TCCCGTCTGCACAACAGGCCAACTGTGTCGCCGACAATTGTGCTTGCTAACATGTATCAG CGCCCTGATATGATCACACCAGGAGTCGATGCTCAAGGCCAACCTATTGATCCTGAAAAG ATGCAGGAGCACTTTGAGGATTTCTATGAGGATATCTATGAGGAGCTGAGCAAGTTTGGT GAGGTTGAGACCCTCAATGTCTGTGATAACCTTGCTGACCACATGATAGGCAATGTGTAT GTCCAGTTCAGGGAGGAAGAACAGGCAGTCGCTGCGCATAATGCCCTTCAAGGTCGCTTC TACTCAGGGCGCCCAATAATTGTTGAGTATTCCCCTGTGACTGATTTCCGTGAGGCGACC TGTAGGCAGTTTGAGGAGAACAGCTGCAACCGTGGGGGCTACTGTAATTTTATGCATGTA AAGCAGATTGGCAGGGAGCTCAGGAGGAAGCTTTATGGGGGGCGATCCAGGAGGAGCCAT GGGAGAAGCCGCAGCCCAAGCCCACGCCACAGGAGGGGCAATCGTGACCGTGATGATTTC CGCCGTGAACGTGATGGTTATCGTGGTGGTGGTGATGGTTACCGTGGCGGCGGCGGTGGC GGTGGTGGTGACGGTTACCGCGGCGGTGATAGTTACCGTGGTGGTGGTGGTGGTGGACGC AGGGGTGGGGGCAGCAGGTATGACAGGTATGATGATGGAGGAAGGCGCAGGCATGGCAGC CCCCCAAGGCGTGCAAGGAGCCCAGTCAGGGAAAGCAGCGAGGAACGCAGGGCGAAGATT GAACAGTGGAACCGTGAACGGGAGGAAAAGCCTTGAACGAAAGCAGTGATATCTCTATGG ATGGCCGGTTCATGCCTTCATGGCAATCACTATCCGCTGGAGTCGTGGTGTGCTGCTATG TTCTAAGTGGATATTTAGTGTGTGTCGTTTGGTACTCATGCTTGGCTGAGTAACCCTTTT AAATGCAGGATTCTGGATTCTATTTACATTGTGTTTCGTTTGACGTGTAAACCGCCGTTT GTTTTTAAATATGCAATATTGGATCTTTTGTCAGTCTATTATCCTGTC