Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0561500-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:27936171:27939342:-1 gene:Os05g0561500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CMP-KDO synthetase (EC 2.7.7.38) (Fragment). (Os05t0561500-01)
Sequence	ATGCCGATCTGCCCGCCGTCGTCGGAATCCTCGCCGGCGCCGGGGTTGGGGGGGCGCGCG TTGATCTTCCACGGGTTGGCCCTCGGCGCGGCGGCGGCGGCTGCGGCGGCCGCGGCCTAC TTGTACAGGCGGCCGGGCGGGTTCCGCGGCCGCGCGGTGGGCATCATACCGGCGCGCTTC GCCTCCTCCCGCTTCGAGGGGAAGCCGCTCGCCCCCATCCTCGGCAAGCCCATGATACAG AGAACATGGGAAAGAGTTATGTTAGCCTCCTCTTTGGACCATGTTGTCGTGGCAACGGAC GATGAAAGAATAGCTGAATGTTGTAGAGGATTCGGAGCTGATGTAATAATGACATCAGAA TCATGCAGAAATGGATCTGAGCGTTGCTGTGAGGCTCTTCAAAAGCTAAACAAGCATTAT GATATTGTTGTCAATATTCAAGGAGACGAGCCTCTTATTGAACCAGAGATAATAGATGGT GTAGTTATGGCACTACAGCGAGCTCCTGATGCAGTCTTTAGCACAGCTGTCACTGCACTG AAACCTGAAGATGCATCTGATACAAATCGAGTGAAGTGTGTTTTAGATAACCAGGGTTAT GCAATATACTTCTCAAGAGGGCTGATTCCATTTAATAAATCAGGGAAAGTCAATCCTCAG TTTCCATATCTTCTTCATCTGGGCATTGCGGGCTTTGATTCCAAGTTTTTGAAGATCTAT CCAGAGCTTCCACCAACTCCATTACAGCTAGAAGAGGATCTCGAGCAACTTAAAGTTCTT GAAAATGGATACAGGATGAAGGTAATCAAAGTTGATCATGATGCCCATGGTGTGGATGCG CCTGAAGATGTTGAGAAAATAGAAGCATTGATGCGTGCAAGGAACATCCAGTAG

Peptide Sequence

PEP ID	Os05t0561500-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:27936171:27939342:-1 gene:Os05g0561500 transcript:Os05t0561500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CMP-KDO synthetase (EC 2.7.7.38) (Fragment). (Os05t0561500-01)
Sequence	MPICPPSSESSPAPGLGGRALIFHGLALGAAAAAAAAAAYLYRRPGGFRGRAVGIIPARF ASSRFEGKPLAPILGKPMIQRTWERVMLASSLDHVVVATDDERIAECCRGFGADVIMTSE SCRNGSERCCEALQKLNKHYDIVVNIQGDEPLIEPEIIDGVVMALQRAPDAVFSTAVTAL KPEDASDTNRVKCVLDNQGYAIYFSRGLIPFNKSGKVNPQFPYLLHLGIAGFDSKFLKIY PELPPTPLQLEEDLEQLKVLENGYRMKVIKVDHDAHGVDAPEDVEKIEALMRARNIQ

Transcript Sequence

Transcript ID	Os05t0561500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:27936171:27939342:-1 gene:Os05g0561500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CMP-KDO synthetase (EC 2.7.7.38) (Fragment). (Os05t0561500-01)
Sequence	GGCACGTGGCGGTCGCAGTCGCAGTCGCAGTGGGGATCAGCGGCGCCGCCGTGCGAAGAA GCCGGCGGAGATGCCGATCTGCCCGCCGTCGTCGGAATCCTCGCCGGCGCCGGGGTTGGG GGGGCGCGCGTTGATCTTCCACGGGTTGGCCCTCGGCGCGGCGGCGGCGGCTGCGGCGGC CGCGGCCTACTTGTACAGGCGGCCGGGCGGGTTCCGCGGCCGCGCGGTGGGCATCATACC GGCGCGCTTCGCCTCCTCCCGCTTCGAGGGGAAGCCGCTCGCCCCCATCCTCGGCAAGCC CATGATACAGAGAACATGGGAAAGAGTTATGTTAGCCTCCTCTTTGGACCATGTTGTCGT GGCAACGGACGATGAAAGAATAGCTGAATGTTGTAGAGGATTCGGAGCTGATGTAATAAT GACATCAGAATCATGCAGAAATGGATCTGAGCGTTGCTGTGAGGCTCTTCAAAAGCTAAA CAAGCATTATGATATTGTTGTCAATATTCAAGGAGACGAGCCTCTTATTGAACCAGAGAT AATAGATGGTGTAGTTATGGCACTACAGCGAGCTCCTGATGCAGTCTTTAGCACAGCTGT CACTGCACTGAAACCTGAAGATGCATCTGATACAAATCGAGTGAAGTGTGTTTTAGATAA CCAGGGTTATGCAATATACTTCTCAAGAGGGCTGATTCCATTTAATAAATCAGGGAAAGT CAATCCTCAGTTTCCATATCTTCTTCATCTGGGCATTGCGGGCTTTGATTCCAAGTTTTT GAAGATCTATCCAGAGCTTCCACCAACTCCATTACAGCTAGAAGAGGATCTCGAGCAACT TAAAGTTCTTGAAAATGGATACAGGATGAAGGTAATCAAAGTTGATCATGATGCCCATGG TGTGGATGCGCCTGAAGATGTTGAGAAAATAGAAGCATTGATGCGTGCAAGGAACATCCA GTAGCATGAAAATGATCGATTTTGTACGTTGTGTGGTTACATGTTTGATTCGACTGTTCG TGTTCTAGTATAGCCTTTCTGAAGAGCACATGAGGTTAATTTGAGTTTGTAAATTAGAAG CTGTTTGAAAGTTGAATTACTGTTTTGAGTGTGCATAGCGTTGCACTTCTTTCTTACAAC GTTGAAGGAACATAGCGCATCTCCATTTACTGAAATGGCAGTGCACCTACTTGTATTTAC TGTAATTACCAGGCCATACAGTTCGTTTCGAGTTTGTTCTTGTT