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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0560500-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:27896047:27896647:-1 gene:Os05g0560500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0560500-01)
Sequence

ATGCTTGGGAGGAAGAAAGGATCGTCGTCCAGGTTGAGTGATCCCATCAACACGACTGTC
ACTACTGATAACGGCCAGGAAATGGCTGCTTCGCATTTCATCTCGCAGCAGGCTTCACAG
CTCGATGAGGCTGCGAGGAAGAGACTGCAAAGAATGAACGAGAGGCTGAAGTTGCTGGAG
ATGCAGATGGAAACACTGGAGGCTGGCGTCGCGAAGGCGAGCAATGACTCCTACGAGTAG

Peptide Sequence

PEP ID

Os05t0560500-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:27896047:27896647:-1 gene:Os05g0560500 transcript:Os05t0560500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0560500-01)
Sequence

MLGRKKGSSSRLSDPINTTVTTDNGQEMAASHFISQQASQLDEAARKRLQRMNERLKLLE
MQMETLEAGVAKASNDSYE

Transcript Sequence

Transcript ID

Os05t0560500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:27896047:27896647:-1 gene:Os05g0560500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0560500-01)
Sequence

ACAACCCCGCCTGAACTGAATCTAGTGTAGTGAAGACAGGAGTGGCTAAACTGCATCCCG
GAAATGCTTGGGAGGAAGAAAGGATCGTCGTCCAGGTTGAGTGATCCCATCAACACGACT
GTCACTACTGATAACGGCCAGGAAATGGCTGCTTCGCATTTCATCTCGCAGCAGGCTTCA
CAGCTCGATGAGGCTGCGAGGAAGAGACTGCAAAGAATGAACGAGAGGCTGAAGTTGCTG
GAGATGCAGATGGAAACACTGGAGGCTGGCGTCGCGAAGGCGAGCAATGACTCCTACGAG
TAGAGATGTTTAGCAATCTTTGTTATAGACACCAGGTTTGGTGACATGCAAGCAAAATTA
GATGATAGCTTGAGTAGTTTTACCTGAACTTGCAGCAAATCACCGTCACCTCGTTGTAGA
ATTCCGGATCTGTTTCAGGTTTCAGCGCTTCAGTTTTGTTCTTTCACTACGAGCCAATAA
GCTTTAGTGCAGATGTC