Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0559900-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:27868472:27877526:-1 gene:Os05g0559900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 25, SKIPa-interacting protein 25, SKIPa-interacting protein 25 description:tRNA-binding arm domain containing protein. (Os05t0559900-01);Similar to SKIP interacting protein 25. (Os05t0559900-02)
Sequence	ATGGCGTGGTGGTCGGGGAAGGTGTCGCTCGGTGGCCTGCAGGATATCGCAGGGGCCGTG AATAAGATCAGCGAGAGCGTGAAGAACATCGAGAAGAACTTCGACAGCGCGCTCGGGCTC GAGGAGAAGCGCGACGATGAGGAAGGATCAGGATCACATGCATCTAACTCTGATAGAATA GGGTTCTTTAATCCTGTCATGGCATTCATGGGAAATAATGGCGAGGAGGATTCTGCTGAA GCATCAGAAAAGCAGCAACCTCCAAAAAGTACAACCGCAGAACAGAGCCAAAGTGCCTCC ACAGAGGCGCCTACATCCAAGGTAGATGCTTCTGAAGAATCGGAATCAACACAATCTCCA AAGCCTTCTGAACAAGGAGAGACTCTTATCAGCTCAACTGAGCCACCTGTATCCAAGGCT GAGGTTTCTGAGCAACTAGCAACACCAAAAACTCCAAAATCACTTTCAGCAACAGAAGAA AAGCCTAGTCATTCTACTGAATCACCCACATATAAAGGGGATTCAGAAGCACCACAATCT CCCACAGATCCATCAACAGCAGAAGAAAACAGTGGATCCACTGAGACGGGTAATACAATT GAGACGGGAAACCAGGATCATCAAGAGACAAAATATTCTGGTCCTAATGATGAAGCGCCA CAAAGTCAGATTGGAGAATCTGACAGAGGCATACCTGATGGTACAAAGCCTTCTTCACCT ACTGAATTAGATCAATCAGGTAACACGGGAACAACTGAATACCTTCATGCTGGAACGGAA AACATAGATGATAAAAATGCCATACAATCACAACCACTAGATTCCATTCTAGCCAGTTCA GATGATGTAAATGAAGCTGTGAAAATTGTTAAAGGAGCTGATGATCGAAATGAAATAAGC AGTTCACATGAGAATACTGACACCGTTGACCAAGCTAGTCATGTGGAAGTCATAGAACAT GATGAGCATACTAATGCTGCTGAAAATGATGAAGAAGCTAATCGAACAGAAGCACAGGTA GCAACTGTTGTTGAAAGGGAGGAGAATACAATGGTGCAGCTTGAAGACCTTAGCTCAATG TCCATAATTGTGAGCAATGATTCAAACTCGCAAAATGAGTCGGTGCCCACTTCTGCAGAT GTGCCTGTTGGACTGGTAGAGGTTGGTTCCAATTCAAATGATTTGAGAAAAGAAGAAAAT ATCCAGGGCTCTGTTACAACTAGCAATCATCTGGAATCTGTCGGTGCTGTCGCTGAACTT GAGAAATTAAGACGTGAAATGAAGATGATGGAAGCTGCATTGCAAGGTGCTGCAAGACAA TCCCAGTCCAAAGCTGATGAAATTGCAAGACTGATGAATGAGAATGAACAACTGAAATCA ACAATTGATGATCTTAAGAGCAAGTCAGCTGAAGCCGAAATGGATGCACTTAAAGATGAA TATCACCAGAGAGTAGCAACTCTTGAAAGGAAGGTGTATGCCTTGACCAAAGAACGGGAT ACATTAAGGAGAGAGCAAAATAAAAAAAGTGATGCAGCTGCTCTTTTGAAAGAAAAGGAT GAAATTATCAGTCAGGTCATGGCGGAAGGTGAAGAGCTATCAAAAAAACAAGCTGCTCAA GAAGCTACTATGCGGAAACTTAGGGCACAGGTTCGTGAACTTGAAGAAGAAAAACAACGG CTGAACTCAAAGATCCAGGTTGAGGAGACAAAGGTTGAGAGTATTAAAAGAGATAAGGCT GCAACGGAGAAATTGCTACAGGAAACAATAGAAAGAAATCAAACTGAACTTGCAGCTCAG AAGGAGTTCTACACCAATGCTCTTAACGCAGCTAAAGAGGCTGAGGCATTAGCCGAAGCA AGAGTCAACACTGAAGCCAAAGTTGAACTTGAGAGTCGTTTAAGAGAAGCTTGTGAAAAA GAAAATATCTTAATTAAGACGATTGAGGAGTTGAGGCATGCTCTCACAAGGCAAGAACAG GAGGCTGCATTCAGGGAAGAAAGGCTGAAAAGGGATTATGATGATCTTCAAAGGCGGTAT CAATCCAGTGAACTTCGTTACAATGAACTGGTCACACAAGTTCCTGAATCCACCAGACCA CTTCTAAGGCAAATTGAAGCCATGCAGGAAACAGCTGCTCGAAGGGCAGAGGCTTGGGCT GGTGTAGAGAGAACCTTAAACTCTCGACTTCAGGAAGCAGAAGCAAAAGCTGCTGCTGCA GAAGAAAAGGAACGGTCTGTAAATGAACGTTTGTCTCAAAGCTCATCCCGGATAACTGTT CTAGAGACCCAGATTACAATTCTTAGAACAGAGCAGACACAGCTGAGTCGATCTCTTGAA AAAGAGAGGCAGAGAGCATCCGAAAGTAGACAGGAGTACCTGGCAATTAAGGAGGAGGCG GCAATGCAAGAAGGACGGGCGAAACAGCTTGAAGAAGAAATAAAGGAGCTTCGTACTAGG CACAAAAAGGAGCTGCAAGATGCAGCAGAACACAGGGAGCTGCTTGAGAAGGACCTTGAA AGAGAAAAGGCTGCCAGGGCAGAGCTTGAGAAAACATCTTCCCGTGATGCACCAAAAATT CCGCTTCCAGATCAGACAAGAAATGCTCCTCTCAGAAAGCTCTCTAGTTCTGGCAGTATC AATAGTCTGGAAGAAAGCCATTTCCTTCAAGCATCATTAGATTTGTCAGACAACGCTTCA TTAGAGAGGAGAATGTCTGCTGAAAGTAATATGTCGTATTATCTTCGGAGCATGACTCCA AGTGCTTTTGAATCAGCACTCCGTCAGAAAGATGGAGAGCTAGCTTCTTACACATCGCGT TTGGCCTCATTAGAATCTATTCGGAATTCTCTGGCAGAGGAGTTGGTGAAAATGACTGAA CAGTGTGAGAAGTTGCGTACCGAGGCTTCTGCTCTGCCTGGTTTAAGGGCTGAGCTGGAA GCTTTGAAACAAAGACACTTTCAAGCTCTAGAACTAATGGGGGAACGTGATGAAGAGTTG GAAGAGCTAAGAAATGACATTGTTGACCTAAAAGAGATGTACAGAGAACAAGTGGATCTT CTTGTTAGCCAGCTCCAATCTTTGGGTGCTCGTGTATAG

Peptide Sequence

PEP ID	Os05t0559900-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:27868472:27877526:-1 gene:Os05g0559900 transcript:Os05t0559900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 25, SKIPa-interacting protein 25, SKIPa-interacting protein 25 description:tRNA-binding arm domain containing protein. (Os05t0559900-01);Similar to SKIP interacting protein 25. (Os05t0559900-02)
Sequence	MAWWSGKVSLGGLQDIAGAVNKISESVKNIEKNFDSALGLEEKRDDEEGSGSHASNSDRI GFFNPVMAFMGNNGEEDSAEASEKQQPPKSTTAEQSQSASTEAPTSKVDASEESESTQSP KPSEQGETLISSTEPPVSKAEVSEQLATPKTPKSLSATEEKPSHSTESPTYKGDSEAPQS PTDPSTAEENSGSTETGNTIETGNQDHQETKYSGPNDEAPQSQIGESDRGIPDGTKPSSP TELDQSGNTGTTEYLHAGTENIDDKNAIQSQPLDSILASSDDVNEAVKIVKGADDRNEIS SSHENTDTVDQASHVEVIEHDEHTNAAENDEEANRTEAQVATVVEREENTMVQLEDLSSM SIIVSNDSNSQNESVPTSADVPVGLVEVGSNSNDLRKEENIQGSVTTSNHLESVGAVAEL EKLRREMKMMEAALQGAARQSQSKADEIARLMNENEQLKSTIDDLKSKSAEAEMDALKDE YHQRVATLERKVYALTKERDTLRREQNKKSDAAALLKEKDEIISQVMAEGEELSKKQAAQ EATMRKLRAQVRELEEEKQRLNSKIQVEETKVESIKRDKAATEKLLQETIERNQTELAAQ KEFYTNALNAAKEAEALAEARVNTEAKVELESRLREACEKENILIKTIEELRHALTRQEQ EAAFREERLKRDYDDLQRRYQSSELRYNELVTQVPESTRPLLRQIEAMQETAARRAEAWA GVERTLNSRLQEAEAKAAAAEEKERSVNERLSQSSSRITVLETQITILRTEQTQLSRSLE KERQRASESRQEYLAIKEEAAMQEGRAKQLEEEIKELRTRHKKELQDAAEHRELLEKDLE REKAARAELEKTSSRDAPKIPLPDQTRNAPLRKLSSSGSINSLEESHFLQASLDLSDNAS LERRMSAESNMSYYLRSMTPSAFESALRQKDGELASYTSRLASLESIRNSLAEELVKMTE QCEKLRTEASALPGLRAELEALKQRHFQALELMGERDEELEELRNDIVDLKEMYREQVDL LVSQLQSLGARV

Transcript Sequence

Transcript ID	Os05t0559900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:27868472:27877526:-1 gene:Os05g0559900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 25, SKIPa-interacting protein 25, SKIPa-interacting protein 25 description:tRNA-binding arm domain containing protein. (Os05t0559900-01);Similar to SKIP interacting protein 25. (Os05t0559900-02)
Sequence	GGCTCAGATCACACCCGGTGGCGAGCTGCTGCGATCACCGACGCGGCGCACCCACGCCAC CACCACCACCCGCGGCCGAACGCACTAAGCCTCTCTCTCTCTCTCTCTCTCTCGCCGCCG CCACGACCCGACGCGACGCGACGGGGCCCAGCCCACGCCCAACTCCCCCTACATCTCCCC CCGCCGCGGCGGCGGGGGCGCGGTGAAGCTTCCTCCCCGCTCCGCTCCGCCGCGCTGCTC TGCTCTGCCTCTGCAGCCGCCGCCGCCGTTCCCGGCCCTTCGATCGGGGCGGGGGGCCAG ATCCCCCCCGCGCGTCGGCCGAGTGGGAGTGGGGCGCGCGGGACGGAGGTGCGGATCTGA TTGGTCTACGCGCGAGATCTAGCCGGGTGCTGCTGTTCCTGCTGGTGGTTGCGGGGATCG GAGCGGAGGCGGGGGAGGAGGAGGGATGGCGTGGTGGTCGGGGAAGGTGTCGCTCGGTGG CCTGCAGGATATCGCAGGGGCCGTGAATAAGATCAGCGAGAGCGTGAAGAACATCGAGAA GAACTTCGACAGCGCGCTCGGGCTCGAGGAGAAGCGCGACGATGAGGAAGGATCAGGATC ACATGCATCTAACTCTGATAGAATAGGGTTCTTTAATCCTGTCATGGCATTCATGGGAAA TAATGGCGAGGAGGATTCTGCTGAAGCATCAGAAAAGCAGCAACCTCCAAAAAGTACAAC CGCAGAACAGAGCCAAAGTGCCTCCACAGAGGCGCCTACATCCAAGGTAGATGCTTCTGA AGAATCGGAATCAACACAATCTCCAAAGCCTTCTGAACAAGGAGAGACTCTTATCAGCTC AACTGAGCCACCTGTATCCAAGGCTGAGGTTTCTGAGCAACTAGCAACACCAAAAACTCC AAAATCACTTTCAGCAACAGAAGAAAAGCCTAGTCATTCTACTGAATCACCCACATATAA AGGGGATTCAGAAGCACCACAATCTCCCACAGATCCATCAACAGCAGAAGAAAACAGTGG ATCCACTGAGACGGGTAATACAATTGAGACGGGAAACCAGGATCATCAAGAGACAAAATA TTCTGGTCCTAATGATGAAGCGCCACAAAGTCAGATTGGAGAATCTGACAGAGGCATACC TGATGGTACAAAGCCTTCTTCACCTACTGAATTAGATCAATCAGGTAACACGGGAACAAC TGAATACCTTCATGCTGGAACGGAAAACATAGATGATAAAAATGCCATACAATCACAACC ACTAGATTCCATTCTAGCCAGTTCAGATGATGTAAATGAAGCTGTGAAAATTGTTAAAGG AGCTGATGATCGAAATGAAATAAGCAGTTCACATGAGAATACTGACACCGTTGACCAAGC TAGTCATGTGGAAGTCATAGAACATGATGAGCATACTAATGCTGCTGAAAATGATGAAGA AGCTAATCGAACAGAAGCACAGGTAGCAACTGTTGTTGAAAGGGAGGAGAATACAATGGT GCAGCTTGAAGACCTTAGCTCAATGTCCATAATTGTGAGCAATGATTCAAACTCGCAAAA TGAGTCGGTGCCCACTTCTGCAGATGTGCCTGTTGGACTGGTAGAGGTTGGTTCCAATTC AAATGATTTGAGAAAAGAAGAAAATATCCAGGGCTCTGTTACAACTAGCAATCATCTGGA ATCTGTCGGTGCTGTCGCTGAACTTGAGAAATTAAGACGTGAAATGAAGATGATGGAAGC TGCATTGCAAGGTGCTGCAAGACAATCCCAGTCCAAAGCTGATGAAATTGCAAGACTGAT GAATGAGAATGAACAACTGAAATCAACAATTGATGATCTTAAGAGCAAGTCAGCTGAAGC CGAAATGGATGCACTTAAAGATGAATATCACCAGAGAGTAGCAACTCTTGAAAGGAAGGT GTATGCCTTGACCAAAGAACGGGATACATTAAGGAGAGAGCAAAATAAAAAAAGTGATGC AGCTGCTCTTTTGAAAGAAAAGGATGAAATTATCAGTCAGGTCATGGCGGAAGGTGAAGA GCTATCAAAAAAACAAGCTGCTCAAGAAGCTACTATGCGGAAACTTAGGGCACAGGTTCG TGAACTTGAAGAAGAAAAACAACGGCTGAACTCAAAGATCCAGGTTGAGGAGACAAAGGT TGAGAGTATTAAAAGAGATAAGGCTGCAACGGAGAAATTGCTACAGGAAACAATAGAAAG AAATCAAACTGAACTTGCAGCTCAGAAGGAGTTCTACACCAATGCTCTTAACGCAGCTAA AGAGGCTGAGGCATTAGCCGAAGCAAGAGTCAACACTGAAGCCAAAGTTGAACTTGAGAG TCGTTTAAGAGAAGCTTGTGAAAAAGAAAATATCTTAATTAAGACGATTGAGGAGTTGAG GCATGCTCTCACAAGGCAAGAACAGGAGGCTGCATTCAGGGAAGAAAGGCTGAAAAGGGA TTATGATGATCTTCAAAGGCGGTATCAATCCAGTGAACTTCGTTACAATGAACTGGTCAC ACAAGTTCCTGAATCCACCAGACCACTTCTAAGGCAAATTGAAGCCATGCAGGAAACAGC TGCTCGAAGGGCAGAGGCTTGGGCTGGTGTAGAGAGAACCTTAAACTCTCGACTTCAGGA AGCAGAAGCAAAAGCTGCTGCTGCAGAAGAAAAGGAACGGTCTGTAAATGAACGTTTGTC TCAAAGCTCATCCCGGATAACTGTTCTAGAGACCCAGATTACAATTCTTAGAACAGAGCA GACACAGCTGAGTCGATCTCTTGAAAAAGAGAGGCAGAGAGCATCCGAAAGTAGACAGGA GTACCTGGCAATTAAGGAGGAGGCGGCAATGCAAGAAGGACGGGCGAAACAGCTTGAAGA AGAAATAAAGGAGCTTCGTACTAGGCACAAAAAGGAGCTGCAAGATGCAGCAGAACACAG GGAGCTGCTTGAGAAGGACCTTGAAAGAGAAAAGGCTGCCAGGGCAGAGCTTGAGAAAAC ATCTTCCCGTGATGCACCAAAAATTCCGCTTCCAGATCAGACAAGAAATGCTCCTCTCAG AAAGCTCTCTAGTTCTGGCAGTATCAATAGTCTGGAAGAAAGCCATTTCCTTCAAGCATC ATTAGATTTGTCAGACAACGCTTCATTAGAGAGGAGAATGTCTGCTGAAAGTAATATGTC GTATTATCTTCGGAGCATGACTCCAAGTGCTTTTGAATCAGCACTCCGTCAGAAAGATGG AGAGCTAGCTTCTTACACATCGCGTTTGGCCTCATTAGAATCTATTCGGAATTCTCTGGC AGAGGAGTTGGTGAAAATGACTGAACAGTGTGAGAAGTTGCGTACCGAGGCTTCTGCTCT GCCTGGTTTAAGGGCTGAGCTGGAAGCTTTGAAACAAAGACACTTTCAAGCTCTAGAACT AATGGGGGAACGTGATGAAGAGTTGGAAGAGCTAAGAAATGACATTGTTGACCTAAAAGA GATGTACAGAGAACAAGTGGATCTTCTTGTTAGCCAGCTCCAATCTTTGGGTGCTCGTGT ATAGTGCTGCTGTATGTCAGTATGTAGCTTCGGCTGCCATCCATTTTTTTTTCGCATCGC GCTAATCTACTAAGCCCCATACAGCAGATCTGAAGCTTGGCGTGTTTCTTCGAAATTCAA GCCGTGACAAATACCGAAAGTTCATAGCCATACCAGTGTGAAAATATTCGTTTTTGTACA TCTTGAAGCACAAGTCTTTTTGGACAGTTGAGCACCCTTGTTTAATTTAGTAGGTTACTC TGTTGTATACTAGTTTGGATAGCTTTACGGTTTTTAAGCCTATTGTTTGCAATTCTTTCC AGTGAAGTGTATCAAATTTGTAATTCGATTAAAAGTGTATCACAGCGGAATGCAACCCCA ATAATATGAGAGCTCGTTTTTGTCATTTTCCTCAGGTTCGACC