Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0559350-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:27839324:27840565:-1 gene:Os05g0559350 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to binding. (Os05t0559350-00)
Sequence

ATGAGCCGCGCGCAGCCTGGCGGGGCGGCCGCCGGCGGCGGCGGCGCGGCGAGGCTCAAG
CCGTCCCCAAGGGCGCTCTTCTCGTGCGGGATCTTCAGCACCTGCACGCACCCGGCGCTC
AGCCCGACGGCCACGCCCAACAACAATGTCGTGGCGGGGATGGGCGGGGCCAAGGGCGGA
TCGGGCACGCCGTGCGGCGGGGATGCGGCCGCGGCGTCGCCGGTCGTGGAGGCGGCGGCG
CCGGCGGTGGAGATGAGTAGTCATCATCAGCATCCGCAGCAGCAGCAGCAGCAGGGTGCG
GCGGTGCAGAGGAGCGTCGGGCCGTCGTCGTCCTCGTCGTCGTCCTCGTCTTCGGCGTCG
CAGAGCTTCACGCAGTGGAGGCTGCCGGTGCATCACCCGCCGCAAGCGTCGGGGTCGGCG
GGAGGAGGAGGAGGTGGTGGAGGTGGGGGTGGGGGTGCGGTGATGATGAGCGCGGAGGAG
AAGTTCGCGGCGGGGGAGGTGGTGGCGGCGCTGCGGACTGTGGAGAGGGAGATGGAGGCG
GCGGCGAGGGCGGTGCCGGTCGCCGTCGTGGCCGGGGTCGTGGCGGCGGTGCGGGAGCCG
GAGACGGCGAGGCTCGCGGCGAAGGTGCTGTTGGTCGTGCTGCTGGAAGAAGGGAACAGG
GAGGCGGCCGTCGAGGCCGGCGCGGCGTCGGCGGCCGTGGAGGCGGTGGCGGCGTCCGGG
CCGGCGGGGGCCACGGCGGAGCGCGCGCTGGCGGCGCTGGAGCTCCTCTGCACCGCCGCC
GGCGGCGCCGCGGCCGTGCGGAGGGAGCCCCTGGCCGCGCCCGTGCTGGCGCGCGCCGTG
GAGGGCATGGCCGGCCGCGGACGCGAGTGCGCCATCGGCGTCCTGGCGGCCATCTACGGC
AGGAACGGCGACGAGGCCGCCTCGTCGCCGCCGTCGCCGCCGCCGCCGGAGGTGGTGAAG
GCGGTGGTGGCGGCGATGCAGGGGGAGTGCAGCGCGCGGGGGCGGCGCAAGGGCGCGCAG
CTGCTGCGCGCGCTGCAGGAGGGCGGCCGCCTCGGCCTCGCGTGGGACGGCGTCGGCGAG
CCCTGA

Peptide Sequence

PEP ID

Os05t0559350-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:27839324:27840565:-1 gene:Os05g0559350 transcript:Os05t0559350-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to binding. (Os05t0559350-00)
Sequence

MSRAQPGGAAAGGGGAARLKPSPRALFSCGIFSTCTHPALSPTATPNNNVVAGMGGAKGG
SGTPCGGDAAAASPVVEAAAPAVEMSSHHQHPQQQQQQGAAVQRSVGPSSSSSSSSSSAS
QSFTQWRLPVHHPPQASGSAGGGGGGGGGGGGAVMMSAEEKFAAGEVVAALRTVEREMEA
AARAVPVAVVAGVVAAVREPETARLAAKVLLVVLLEEGNREAAVEAGAASAAVEAVAASG
PAGATAERALAALELLCTAAGGAAAVRREPLAAPVLARAVEGMAGRGRECAIGVLAAIYG
RNGDEAASSPPSPPPPEVVKAVVAAMQGECSARGRRKGAQLLRALQEGGRLGLAWDGVGE
P

Transcript Sequence

Transcript ID

Os05t0559350-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:27839324:27840565:-1 gene:Os05g0559350 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to binding. (Os05t0559350-00)
Sequence

CGCCACTCCCATCTCCCCACTGCTGCTCCTCACTCCACTCTGCTCGCTCTCTCGCTCGCT
AGCTATAGCCTATAGCTAGGTACCTAGAAGCCTAGAGGATAATATGAGCCGCGCGCAGCC
TGGCGGGGCGGCCGCCGGCGGCGGCGGCGCGGCGAGGCTCAAGCCGTCCCCAAGGGCGCT
CTTCTCGTGCGGGATCTTCAGCACCTGCACGCACCCGGCGCTCAGCCCGACGGCCACGCC
CAACAACAATGTCGTGGCGGGGATGGGCGGGGCCAAGGGCGGATCGGGCACGCCGTGCGG
CGGGGATGCGGCCGCGGCGTCGCCGGTCGTGGAGGCGGCGGCGCCGGCGGTGGAGATGAG
TAGTCATCATCAGCATCCGCAGCAGCAGCAGCAGCAGGGTGCGGCGGTGCAGAGGAGCGT
CGGGCCGTCGTCGTCCTCGTCGTCGTCCTCGTCTTCGGCGTCGCAGAGCTTCACGCAGTG
GAGGCTGCCGGTGCATCACCCGCCGCAAGCGTCGGGGTCGGCGGGAGGAGGAGGAGGTGG
TGGAGGTGGGGGTGGGGGTGCGGTGATGATGAGCGCGGAGGAGAAGTTCGCGGCGGGGGA
GGTGGTGGCGGCGCTGCGGACTGTGGAGAGGGAGATGGAGGCGGCGGCGAGGGCGGTGCC
GGTCGCCGTCGTGGCCGGGGTCGTGGCGGCGGTGCGGGAGCCGGAGACGGCGAGGCTCGC
GGCGAAGGTGCTGTTGGTCGTGCTGCTGGAAGAAGGGAACAGGGAGGCGGCCGTCGAGGC
CGGCGCGGCGTCGGCGGCCGTGGAGGCGGTGGCGGCGTCCGGGCCGGCGGGGGCCACGGC
GGAGCGCGCGCTGGCGGCGCTGGAGCTCCTCTGCACCGCCGCCGGCGGCGCCGCGGCCGT
GCGGAGGGAGCCCCTGGCCGCGCCCGTGCTGGCGCGCGCCGTGGAGGGCATGGCCGGCCG
CGGACGCGAGTGCGCCATCGGCGTCCTGGCGGCCATCTACGGCAGGAACGGCGACGAGGC
CGCCTCGTCGCCGCCGTCGCCGCCGCCGCCGGAGGTGGTGAAGGCGGTGGTGGCGGCGAT
GCAGGGGGAGTGCAGCGCGCGGGGGCGGCGCAAGGGCGCGCAGCTGCTGCGCGCGCTGCA
GGAGGGCGGCCGCCTCGGCCTCGCGTGGGACGGCGTCGGCGAGCCCTGACAATGTGGGCC
CAGGAAGCCAGCCTCTCGCGATCCTGGGCCCCACCCGCAGTG