Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0558000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:27764857:27766656:-1 gene:Os05g0558000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L1 family protein. (Os05t0558000-01)
Sequence	ATGTCGGCGGCGCAGCAGCAGAAGCACGAGGTGGACCGGGCGACGGTGGCCGGAGCCGTG GCCGCGCTGTTCAAGTGGATGCGCGCGCGCGCGGCGGAGGCTCCACCGAACCTCCTCGCC GACGAGCGCGACGACCTCCTGCTCCTCCAGCTCTCCCTCCGCCGCATCCCGCCCTCACCG ACGACCAAGCCGCGCCTCCTTCCGCTCCCCCACCCCGTCATCGTCCCCGGCGAGTCGGCC TCCATCTGCGTCATCTCCGACGACCGCCCCAAGTCCCGCTCCCCGGCCGCCTCCGACCTG CTCGACGCGTCCAGGTCCCACCACCTCCCCGTCTCCGAGGTCATCCCGCTCTCCGCCCTC CGCACCGACTACCGCCCGTACGAGTCCCGCCGCCGCCTCGCCGCCTCCCACGACCTCTTC ATCGCCGACCGCGCCGTCCTCCCGCTGCTCCCGCGCGTCCTCGGCAAGGCCTTCTACTCC ACCAAGAAGGCCCCCGTCGCCGTCGACTTCGCCCGCACCGGGTGGCTGGAGCAGGTCCGC AAGGTGATGAACTCGACTTTTCTCTACCTGCGGACGGGCACCTGCTCTGGGATCAAGGTT GGGAGGCTGGACATGAAGGAAGAGGACACCGTGGAGAATGTGATGGCGGCGGTGGAGGCG GCCGTGGAGAATGTGCCCAAGAAGTGGGCGAATGTGAGGTCTCTCCATTTGAAGGCTGTG GATTCAGTTGCATTACCAATTTACCAGGCTGTGCCGGAGTTGGGCATGAAGATCGAGGTC CGGTTTGCACAATTGGAGGGAGAAGTCGGTTCCGGGGAGGTTATCGATGCTTCGGAAGCT GGAGCTGCACTGAAGGGTGTCGGCAAGAAGAAGGCGAAGAAGGCATTGAAACATGTGGAA GAAGAGAATGCTGGTGAGGAAGCTGCACAGGAGAGTGGCAAGAGGAAGAGGGGTAAGAAG CAACTAGCTGAGGATTTGATGGAGCAAGACATCCAAGATGTGAGTGAGAAAAGGAAGAAG GTGAAGGAGGGCACCCCTGCTGCCGAAACGCCGAAGATTAGCAAGAAGGGTAAGGAGAAG AGCAAGCGTGCATTGGACAAGGAGGGGGAGGATGCAAGTGTGGAGGAAGCCAGTAACAAG AAAAAGAAGGGCAAGAAAGAGGTGGTGAGTGATGTTGGGGAGAAGAACAGCAAGGTGAAG AAATCAAATGGTGATAAGGAGAAGAGAAGGACCAGATTAAGGGTATAG

Peptide Sequence

PEP ID	Os05t0558000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:27764857:27766656:-1 gene:Os05g0558000 transcript:Os05t0558000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L1 family protein. (Os05t0558000-01)
Sequence	MSAAQQQKHEVDRATVAGAVAALFKWMRARAAEAPPNLLADERDDLLLLQLSLRRIPPSP TTKPRLLPLPHPVIVPGESASICVISDDRPKSRSPAASDLLDASRSHHLPVSEVIPLSAL RTDYRPYESRRRLAASHDLFIADRAVLPLLPRVLGKAFYSTKKAPVAVDFARTGWLEQVR KVMNSTFLYLRTGTCSGIKVGRLDMKEEDTVENVMAAVEAAVENVPKKWANVRSLHLKAV DSVALPIYQAVPELGMKIEVRFAQLEGEVGSGEVIDASEAGAALKGVGKKKAKKALKHVE EENAGEEAAQESGKRKRGKKQLAEDLMEQDIQDVSEKRKKVKEGTPAAETPKISKKGKEK SKRALDKEGEDASVEEASNKKKKGKKEVVSDVGEKNSKVKKSNGDKEKRRTRLRV

Transcript Sequence

Transcript ID	Os05t0558000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:27764857:27766656:-1 gene:Os05g0558000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L1 family protein. (Os05t0558000-01)
Sequence	CGCCGCCACACCTCCACCTCTCCTCTTCCTTCCCCTCGCCGCCGCCGCCTTCTCGTCGAC GCAGCCATGTCGGCGGCGCAGCAGCAGAAGCACGAGGTGGACCGGGCGACGGTGGCCGGA GCCGTGGCCGCGCTGTTCAAGTGGATGCGCGCGCGCGCGGCGGAGGCTCCACCGAACCTC CTCGCCGACGAGCGCGACGACCTCCTGCTCCTCCAGCTCTCCCTCCGCCGCATCCCGCCC TCACCGACGACCAAGCCGCGCCTCCTTCCGCTCCCCCACCCCGTCATCGTCCCCGGCGAG TCGGCCTCCATCTGCGTCATCTCCGACGACCGCCCCAAGTCCCGCTCCCCGGCCGCCTCC GACCTGCTCGACGCGTCCAGGTCCCACCACCTCCCCGTCTCCGAGGTCATCCCGCTCTCC GCCCTCCGCACCGACTACCGCCCGTACGAGTCCCGCCGCCGCCTCGCCGCCTCCCACGAC CTCTTCATCGCCGACCGCGCCGTCCTCCCGCTGCTCCCGCGCGTCCTCGGCAAGGCCTTC TACTCCACCAAGAAGGCCCCCGTCGCCGTCGACTTCGCCCGCACCGGGTGGCTGGAGCAG GTCCGCAAGGTGATGAACTCGACTTTTCTCTACCTGCGGACGGGCACCTGCTCTGGGATC AAGGTTGGGAGGCTGGACATGAAGGAAGAGGACACCGTGGAGAATGTGATGGCGGCGGTG GAGGCGGCCGTGGAGAATGTGCCCAAGAAGTGGGCGAATGTGAGGTCTCTCCATTTGAAG GCTGTGGATTCAGTTGCATTACCAATTTACCAGGCTGTGCCGGAGTTGGGCATGAAGATC GAGGTCCGGTTTGCACAATTGGAGGGAGAAGTCGGTTCCGGGGAGGTTATCGATGCTTCG GAAGCTGGAGCTGCACTGAAGGGTGTCGGCAAGAAGAAGGCGAAGAAGGCATTGAAACAT GTGGAAGAAGAGAATGCTGGTGAGGAAGCTGCACAGGAGAGTGGCAAGAGGAAGAGGGGT AAGAAGCAACTAGCTGAGGATTTGATGGAGCAAGACATCCAAGATGTGAGTGAGAAAAGG AAGAAGGTGAAGGAGGGCACCCCTGCTGCCGAAACGCCGAAGATTAGCAAGAAGGGTAAG GAGAAGAGCAAGCGTGCATTGGACAAGGAGGGGGAGGATGCAAGTGTGGAGGAAGCCAGT AACAAGAAAAAGAAGGGCAAGAAAGAGGTGGTGAGTGATGTTGGGGAGAAGAACAGCAAG GTGAAGAAATCAAATGGTGATAAGGAGAAGAGAAGGACCAGATTAAGGGTATAGGTTTTA TTCTCTATCTCCTGAGAGATGCTTGTGATATTGGTTGATCGACAGTGTCGTGATGTTCAT CGTGTTGATTAGCTGGGCTAATCTGATAGTTTATCTGCTGGCAGAAGAACTATGCCACTG TCAAGTTTTTGGTAGCCTTGTAGTACTTTATAAGATCTCCAATCTACCGCAGAATGTTCT ACTTTTGTGTGCACTAGAGGTGTCTTCAAAAGTTGTATCTTTTGTTTTTGTTAGCTTACT AGCCTGACTGCCTGAGCCTTCAGGTTAAAGATAGTATGGTAAAACTGTTTCTGGCTTCAT GTGGTTCGCATCAATTTTGTGATCATCTAAGAATATGTCTCAGTTGTTGTCTTCCCTGAA TTACTCATCTAGCATATGCTGTACACTTGGAACCCAGTTTCAATAGGAGCTGGGCTGGGC CATTTGTACTCTCTTACTTTGCATGACTTGTGAGGCGATGGAATGGAATTGAATTGCTGC