Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0557700-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:27740218:27749525:-1 gene:Os05g0557700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LEAF TIP NECROSIS 1 description:Ubiquitin-conjugating E2 enzyme, Phosphate homeostasis, Negative regulator of the inorganic phosphate (Pi)-starvation response-signaling pathway (Os05t0557700-01);Pi starvation-induced isoform, Regulation of Pi homeostasis (Os05t0557700-02)
Sequence	ATGGATCTATATGCAATTGACTCGGACACTGAGTCATACGCTGAAACTAGTGACAGTGAA GAAGACCAAGAAGAATGTGAACTTACATACTGTGGTCATGCCCAGAACATCTTGTCCAGC TTGGACGAGAGCATTGGAAAGATCGATAACTTTCTAAGTTTTGAAAGAGGATTTCTGCAT GGAGACATAGTTTGCTCTGCAGCTGACCCATCAGGTCAGCTGGGCCGTGTAGTTGGAGTT GATATGCTTGTTGACTTGGAAACGAGCTCTGGTGACATAATAAAACATGTCAACAGCAAG AAACTTTCAAGAGTTAGATCCTTTGTCTCTGGTGATTGTGTGGTGATGGGGCCATGGATT GGACGGGTGATCAGGGCATTTGACCTGGTCACTGTTGTGTTCAGTGATGGGGCAAGGTGT GAAATGCTCTTAAGAGATTCTGAGGTACTGAAGCCCATTCCTCCAATCCTTTTTGAAGAT GCACCTTATTTTTACTATCCAGGCCAACGTGTGAGAATTGTTCATCCTTCCATTTCTAAG TCGGGTACATGGTTGTGTGGATCATGGAAAGCTAGTAGAGATGAAGGAGTAGTGTCTCAT GTCGACGTTGGGCTGGTACATGTGAACTGGATCACCTCAGTAACAAATGTTTGGGGAGGT CAATCATCAAGTCCTCCAAACTTTCAGGACCCAAAGAAGCTCACTTTGCTTTCATGCTTC CCTTATGCCAATTGGCAGTTGGGTGACTGGTGCACTCTTTCGGATTGCGAGGGAAGTCTC TGGGAAAATTCTGACAAATCTTGCTTCATGAGTATGACCTGGAAGTCCAGCTCCGACACT CAAACGGCTATCGGAACTTATGGTTCAGATTATTCTCAAACATATGTTGTTGCAAAGACA AAGAGTAGTGTTGATGTTTTATGGCAAGATGGAAGTACATCTCTTGGTTTAGAACCTCAA AGTTTGGTTCCTGTGAGTACTCTTGGTGATCATGATTTTTGGCCTGGGCAATTTATCCTT GAGAAATTGACAGTTGAGGATAATGGTAGATGCCAGCGGACTGGGATAGTGACAAGTGTG GATGCACTTGAACGGACTGTAAAGGTAAAATGGGCTGTTTCAGTTGATAGTGACACTGTC AGTTATGGAGATGGACTCACTGAGGAGACTGTGAGTGCTTATGAGCTAGTATTACACCCA GATTTCTCCTTCTTCACTGGCGAAGTCATTATTAGATCTGCTGTCAACATAGAAAATTCT GAAGCAAATCTTACCAATGGAACCGTGGCAGTTAGCAGGGAGAGCTTGGATACCTCCTCT GCCTTCTTATCATGTATTGGCAATGTTCTTGGATACAATGATGAAGGACTTGAAGTCCAA TGGGCTAGTGGTGCGATATCTAGGGTTCAGCATTTTGAAATTATTGCATTAGATAGGATT CTAGATGATTCTCTAGAATCCATGATCGAGGAGCACACTACTGATGATTTGGTAGACATG GCTGAGCAGGAGAAAATGCACCTTGAGGATACTAAGAGTGCGCTGGAAGAATCTGCTGGA GACTGTACAGGATCCTTGCGCAAAGCCACTGCTTTCCTCTTTTCCAAGACAGCATTTAAT TTTCTGACAAATGTGGCTTCTAGTTTGTTTGGTGCTCATGATTCAACATTTTCCAGCTCG GTCAATGCAGATTCTCAGTATCAAATTGTGACGACAGCAGAACTGCAGCCATCTGCAGAA GATATCTCTGAAGAGAAACAGACCATGGAGCTGATAACACAGTTTGAGAAGCCAACATTA GCTTCAGAAAATGCCATGACAAAAGGATTTGATGTTGTGACCGACTGTTCTGATCACCAC TTTGTCAAAGAAATTGGTCACGAAAATGTCAAAAGAGGTTGGGTGAAGAAGATACAACAG GAATGGTCAATCTTACAAAACGATCTGCCAGATGGTATTCATGTTAGAGTTTATGAAGAA AGGATGGACCTCCTGAGGGCATGCCTTGTAGGTGCAGCTGGAACACCTTATCATGACAAT CTTTTCTTCTTTGATATTTTCTTTCCTCCTGATTATCCTCATGAGCCACCTTCTGTTCAC TACCATTCCGGTGGCCTCCGTTTGAACCCAAATTTGTATGAGTCTGGCAAAGTGTGCCTT AGCCTGCTCAAAACATGGGCAGGAACTGGTAGTGAAGTGTGGGACCCTGAAAATTCAACT GTTCTTCAACTGCTGCTGTCCCTTCAAGCTCTTGTTCTCAATGAAAAACCTTACTTCAAT GAGGCTGGCTATGACAAATTCATGGGGAAAGCAGATGGAGAGAAGAACTCCATCACTTAC AATGAGAACGCTTTCCTGCTGTCATGCAAGTCCATGACGTACATTTTACACAAGCCACCA AAGCATTTCGAGAATTTTGTCAAGGAGCACTTCACTTGTTGCGCGCCGCACATTCTGGAT GCCTGCAAGGCTTATCTCGGCGGCGATCTTGTTGGACATGCTCGTGACAGCGCCTATATA TCGGATGACGGATGCAAGAACTCCTCAACCGGTTTCAAGATAATGCTAGCCAAGCTCTTG CCGAAGCTTGTCACCACCTTCTCTGAAGCCGGCATCCCCTGCAGCCCGTGA

Peptide Sequence

PEP ID	Os05t0557700-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:27740218:27749525:-1 gene:Os05g0557700 transcript:Os05t0557700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LEAF TIP NECROSIS 1 description:Ubiquitin-conjugating E2 enzyme, Phosphate homeostasis, Negative regulator of the inorganic phosphate (Pi)-starvation response-signaling pathway (Os05t0557700-01);Pi starvation-induced isoform, Regulation of Pi homeostasis (Os05t0557700-02)
Sequence	MDLYAIDSDTESYAETSDSEEDQEECELTYCGHAQNILSSLDESIGKIDNFLSFERGFLH GDIVCSAADPSGQLGRVVGVDMLVDLETSSGDIIKHVNSKKLSRVRSFVSGDCVVMGPWI GRVIRAFDLVTVVFSDGARCEMLLRDSEVLKPIPPILFEDAPYFYYPGQRVRIVHPSISK SGTWLCGSWKASRDEGVVSHVDVGLVHVNWITSVTNVWGGQSSSPPNFQDPKKLTLLSCF PYANWQLGDWCTLSDCEGSLWENSDKSCFMSMTWKSSSDTQTAIGTYGSDYSQTYVVAKT KSSVDVLWQDGSTSLGLEPQSLVPVSTLGDHDFWPGQFILEKLTVEDNGRCQRTGIVTSV DALERTVKVKWAVSVDSDTVSYGDGLTEETVSAYELVLHPDFSFFTGEVIIRSAVNIENS EANLTNGTVAVSRESLDTSSAFLSCIGNVLGYNDEGLEVQWASGAISRVQHFEIIALDRI LDDSLESMIEEHTTDDLVDMAEQEKMHLEDTKSALEESAGDCTGSLRKATAFLFSKTAFN FLTNVASSLFGAHDSTFSSSVNADSQYQIVTTAELQPSAEDISEEKQTMELITQFEKPTL ASENAMTKGFDVVTDCSDHHFVKEIGHENVKRGWVKKIQQEWSILQNDLPDGIHVRVYEE RMDLLRACLVGAAGTPYHDNLFFFDIFFPPDYPHEPPSVHYHSGGLRLNPNLYESGKVCL SLLKTWAGTGSEVWDPENSTVLQLLLSLQALVLNEKPYFNEAGYDKFMGKADGEKNSITY NENAFLLSCKSMTYILHKPPKHFENFVKEHFTCCAPHILDACKAYLGGDLVGHARDSAYI SDDGCKNSSTGFKIMLAKLLPKLVTTFSEAGIPCSP

Transcript Sequence

Transcript ID	Os05t0557700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:27740218:27749525:-1 gene:Os05g0557700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LEAF TIP NECROSIS 1 description:Ubiquitin-conjugating E2 enzyme, Phosphate homeostasis, Negative regulator of the inorganic phosphate (Pi)-starvation response-signaling pathway (Os05t0557700-01);Pi starvation-induced isoform, Regulation of Pi homeostasis (Os05t0557700-02)
Sequence	CTGGGGAAGTGAGGAGCTGACCAACCAAAAGGCAGATGCAGATGATGAGATTGTGCTGCA CTTTGGACGGCGAATTCAGCAGCCGTGTGGATGGATATTCTGCATGCGATCCCGGGATCC TGTAAAGGGGGATGGATGCACTTTCATGGGGCCTGCTGATCAATGCAAATAGACTTGAAA GAACATTATATTCTCGTGATCTTATCAAGTGAAGCCATATCTAATGAAAGCTTGTTATAT TTGTTGCTTTCTTGATGAGATTTGTTGCTTATGACCACTTGTGTCCTCTAATCATCCAAA GCAAAAAAAATCATTCAGCCGGTCTTTACCTCTCCAGGAATTAACACCTGTGACAAGTTA TTCCTTGTTTTAGGGCAAATCTCCTTTGGCAATTGCACCTTCCTGTCGATCGATTATCCT GAGCATATTCCTCTTATTGAGAGAACCCTTCAGCTGGGCAAATCTCCTTTGGCAAAATAC CTATCTATAGTCTGTCTATTCGGGCAAATCTCCTTTGGCATTTAGCTTAGATTGCTTCCG GGCAAATCTCCTTTGGCACTACCTTTAGCTTCAGATTGCTCTTTGGGCAAATCTCCTTTG GCACTAGGTACTCTACTACTATCCGCATTAGATATTTGGATCAAATATCCTCTGGAAGTT AGTGGTATTACATCATTATTTCCTGCAACTATATATCGTGGTAATTCTCCTTTGGCATTA GCACTGTACACACATTGGTTCTACCACAATATCGATCTCAGTGAAAGACTGAACACCAGG AAGTCCAGAACGATTCAAGAAATAATTTTTGGCTGGTGGCCGTTGTATTTTAGCATCTTG GACAGGAAGCTTTCAGATTCTGATTGTTCAGTCTGGAAGATTGTTTTGTTATTTATCAAC TCTATACATCAGTGCGCCTATCCTAAGAAGGGCTCGGAAAGATGGATCTATATGCAATTG ACTCGGACACTGAGTCATACGCTGAAACTAGTGACAGTGAAGAAGACCAAGAAGAATGTG AACTTACATACTGTGGTCATGCCCAGAACATCTTGTCCAGCTTGGACGAGAGCATTGGAA AGATCGATAACTTTCTAAGTTTTGAAAGAGGATTTCTGCATGGAGACATAGTTTGCTCTG CAGCTGACCCATCAGGTCAGCTGGGCCGTGTAGTTGGAGTTGATATGCTTGTTGACTTGG AAACGAGCTCTGGTGACATAATAAAACATGTCAACAGCAAGAAACTTTCAAGAGTTAGAT CCTTTGTCTCTGGTGATTGTGTGGTGATGGGGCCATGGATTGGACGGGTGATCAGGGCAT TTGACCTGGTCACTGTTGTGTTCAGTGATGGGGCAAGGTGTGAAATGCTCTTAAGAGATT CTGAGGTACTGAAGCCCATTCCTCCAATCCTTTTTGAAGATGCACCTTATTTTTACTATC CAGGCCAACGTGTGAGAATTGTTCATCCTTCCATTTCTAAGTCGGGTACATGGTTGTGTG GATCATGGAAAGCTAGTAGAGATGAAGGAGTAGTGTCTCATGTCGACGTTGGGCTGGTAC ATGTGAACTGGATCACCTCAGTAACAAATGTTTGGGGAGGTCAATCATCAAGTCCTCCAA ACTTTCAGGACCCAAAGAAGCTCACTTTGCTTTCATGCTTCCCTTATGCCAATTGGCAGT TGGGTGACTGGTGCACTCTTTCGGATTGCGAGGGAAGTCTCTGGGAAAATTCTGACAAAT CTTGCTTCATGAGTATGACCTGGAAGTCCAGCTCCGACACTCAAACGGCTATCGGAACTT ATGGTTCAGATTATTCTCAAACATATGTTGTTGCAAAGACAAAGAGTAGTGTTGATGTTT TATGGCAAGATGGAAGTACATCTCTTGGTTTAGAACCTCAAAGTTTGGTTCCTGTGAGTA CTCTTGGTGATCATGATTTTTGGCCTGGGCAATTTATCCTTGAGAAATTGACAGTTGAGG ATAATGGTAGATGCCAGCGGACTGGGATAGTGACAAGTGTGGATGCACTTGAACGGACTG TAAAGGTAAAATGGGCTGTTTCAGTTGATAGTGACACTGTCAGTTATGGAGATGGACTCA CTGAGGAGACTGTGAGTGCTTATGAGCTAGTATTACACCCAGATTTCTCCTTCTTCACTG GCGAAGTCATTATTAGATCTGCTGTCAACATAGAAAATTCTGAAGCAAATCTTACCAATG GAACCGTGGCAGTTAGCAGGGAGAGCTTGGATACCTCCTCTGCCTTCTTATCATGTATTG GCAATGTTCTTGGATACAATGATGAAGGACTTGAAGTCCAATGGGCTAGTGGTGCGATAT CTAGGGTTCAGCATTTTGAAATTATTGCATTAGATAGGATTCTAGATGATTCTCTAGAAT CCATGATCGAGGAGCACACTACTGATGATTTGGTAGACATGGCTGAGCAGGAGAAAATGC ACCTTGAGGATACTAAGAGTGCGCTGGAAGAATCTGCTGGAGACTGTACAGGATCCTTGC GCAAAGCCACTGCTTTCCTCTTTTCCAAGACAGCATTTAATTTTCTGACAAATGTGGCTT CTAGTTTGTTTGGTGCTCATGATTCAACATTTTCCAGCTCGGTCAATGCAGATTCTCAGT ATCAAATTGTGACGACAGCAGAACTGCAGCCATCTGCAGAAGATATCTCTGAAGAGAAAC AGACCATGGAGCTGATAACACAGTTTGAGAAGCCAACATTAGCTTCAGAAAATGCCATGA CAAAAGGATTTGATGTTGTGACCGACTGTTCTGATCACCACTTTGTCAAAGAAATTGGTC ACGAAAATGTCAAAAGAGGTTGGGTGAAGAAGATACAACAGGAATGGTCAATCTTACAAA ACGATCTGCCAGATGGTATTCATGTTAGAGTTTATGAAGAAAGGATGGACCTCCTGAGGG CATGCCTTGTAGGTGCAGCTGGAACACCTTATCATGACAATCTTTTCTTCTTTGATATTT TCTTTCCTCCTGATTATCCTCATGAGCCACCTTCTGTTCACTACCATTCCGGTGGCCTCC GTTTGAACCCAAATTTGTATGAGTCTGGCAAAGTGTGCCTTAGCCTGCTCAAAACATGGG CAGGAACTGGTAGTGAAGTGTGGGACCCTGAAAATTCAACTGTTCTTCAACTGCTGCTGT CCCTTCAAGCTCTTGTTCTCAATGAAAAACCTTACTTCAATGAGGCTGGCTATGACAAAT TCATGGGGAAAGCAGATGGAGAGAAGAACTCCATCACTTACAATGAGAACGCTTTCCTGC TGTCATGCAAGTCCATGACGTACATTTTACACAAGCCACCAAAGCATTTCGAGAATTTTG TCAAGGAGCACTTCACTTGTTGCGCGCCGCACATTCTGGATGCCTGCAAGGCTTATCTCG GCGGCGATCTTGTTGGACATGCTCGTGACAGCGCCTATATATCGGATGACGGATGCAAGA ACTCCTCAACCGGTTTCAAGATAATGCTAGCCAAGCTCTTGCCGAAGCTTGTCACCACCT TCTCTGAAGCCGGCATCCCCTGCAGCCCGTGACTCATGGCATTGTGAGTTTGTGACACTG GACTACTGTGTATTTGTGACAAAATCGGGACACCAATATATGCTGTGTATGTACTGTATA TGTGCAAGCTTTGTGACTTTGTGTATCCCAAAATAAAATGCTGCCTGGTTTGTATGATAC TTAACATGGTGATGTCTGTTGTAACTTGTAAGTGTGGTTGAGGCAGCTGGTGTGGTTGGG TTTGTGGTCAGTTACTCAGTTCACGTGTGTTTTGAGCATGTGAAGTATGT