Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0557600-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:27733895:27738318:-1 gene:Os05g0557600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBIQUITIN-CONJUGATING ENZYME 41 description:Ubiquitin-conjugating enzyme/RWD-like domain containing protein. (Os05t0557600-01)
Sequence	ATGGCGACCCACGCCCCCAAGGGCTACCTCTGCGCGGGGAGCTCGTCGTTCGATGATCCC GACGTGGTCGAGGTGACGCCGGCGGCGGCCGCGGCAGGGGGGTGGAGCTCCGGCCACCAG AAGCGGAAGCGGAGTCAGGTTGTTCCTCATGAAGTAATTGAACTGGATGCTGATGATGAT CCTGATGGAGTTGTGATTATTGGTGAAAAATCATCAGTTGATAAGAATAAGCAAGCTGTT GGATATCCTATAGACTGGCTAAAGCATGCAAAGAGTAGTTTGGCTGGTGAAATTGCTGGC CCAAGTTCCTACCCATCAAAAAATCCTGATATATTACTTGGTGGCCTGAAAATATTTCAA GAGAACCCATTTTACAACAACATTGATGACTATGCTTATGAGGCATTTGAAGAAGATTAT GGTTATGATGAAGATGAGTATGATGATTACGATTATGATAGTACACTTTATGAAAGTGAA TATAACTTCACTTTGGCTTCCAAGTTTGATGGTTTGGATATCCCACCTGGTGTGGAGGCT CCTTTACCATGGTTGCAGACGACTGCGGCAGAGATGGCAAATAAGACCAAACCTGTGAAC ATGATGGATGATAAAATTGATGAAAAATACAGTGCATTTAAGCAATTCGATACTGTTGAT GATCACAGTGATCATTATTATTCGAAGCCAGATTTAAGAAAGGTTCAGGTAGTGAAAAAG CCTTCAAAAGAATGGGCAAAGCGTATTCAGCACGAGTGGAAAGTTCTAGAAAAAGATTTA CCAGATACCATATTCGTGAGGGCATATGAGGATAGAATGGACCTGCTTAGAGCTGTTATT ACGGGACCAGCAGGCACTCCCTATCATGATGGTCTCTTCTTCTTTGACATTTACTTCCCT CCTCATTATCCGAGTGTACCTCCACTGGTGAACTATCGGTCTGGTGGGTTGCGGCTTAAT CCAAACTTGTATGCTTGCGGGAAGGTGTGCCTTAGCCTGTTGAACACCTGGTCTGGTAGT GGATGTGAGAGGTGGAGTCCTTCAAACTCAACAATGCTACAAGTCCTGGTCTCAGTTCAG GCTTTGGTGTTGAATGCCAAACCTTATTTCAATGAGCCTGGATATGCCATGCATGCTAAT ACACCTCATGGCGAGAAGAGTTCATTAACTTATAATGAAGATACTTTCCTGCTATCCTGC AGGACAATGCTATATTCTCTGCGAAATCCACCAAAGCATTTTGAGGATTTTATCGCCGGT CATTTCCGCAAGTATGGCCAGAGCATCCTGATAGCTTGCAGAGCCTATCTGGACGGTGCC CAAGTTGGATGTCTTGTTGGAAATGGTGTGCAGGATGTCGATGAGGGCGACAAGAGCTGC TCGGCGAGGTTTAAGAGCGCGCTGAAGAGATTATTTGAGGAACTTCTGATGGAATTCACT GTCAAGGGAGCAGAGTGTGACAAATTCCTAGCTGAGAAGGCCAAAGCCGCGGCTTCTAGA GCTCCAGCAGACACCACATTGAGGCTATAA

Peptide Sequence

PEP ID	Os05t0557600-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:27733895:27738318:-1 gene:Os05g0557600 transcript:Os05t0557600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBIQUITIN-CONJUGATING ENZYME 41 description:Ubiquitin-conjugating enzyme/RWD-like domain containing protein. (Os05t0557600-01)
Sequence	MATHAPKGYLCAGSSSFDDPDVVEVTPAAAAAGGWSSGHQKRKRSQVVPHEVIELDADDD PDGVVIIGEKSSVDKNKQAVGYPIDWLKHAKSSLAGEIAGPSSYPSKNPDILLGGLKIFQ ENPFYNNIDDYAYEAFEEDYGYDEDEYDDYDYDSTLYESEYNFTLASKFDGLDIPPGVEA PLPWLQTTAAEMANKTKPVNMMDDKIDEKYSAFKQFDTVDDHSDHYYSKPDLRKVQVVKK PSKEWAKRIQHEWKVLEKDLPDTIFVRAYEDRMDLLRAVITGPAGTPYHDGLFFFDIYFP PHYPSVPPLVNYRSGGLRLNPNLYACGKVCLSLLNTWSGSGCERWSPSNSTMLQVLVSVQ ALVLNAKPYFNEPGYAMHANTPHGEKSSLTYNEDTFLLSCRTMLYSLRNPPKHFEDFIAG HFRKYGQSILIACRAYLDGAQVGCLVGNGVQDVDEGDKSCSARFKSALKRLFEELLMEFT VKGAECDKFLAEKAKAAASRAPADTTLRL

Transcript Sequence

Transcript ID	Os05t0557600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:27733895:27738318:-1 gene:Os05g0557600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBIQUITIN-CONJUGATING ENZYME 41 description:Ubiquitin-conjugating enzyme/RWD-like domain containing protein. (Os05t0557600-01)
Sequence	ACCCAAACCCTCCCTTTCCTCCCCCAATTCTCCATTTCTCCTAGCTCGCCGGAAACCCTA AGCGGGCCACCTCGCGCCGCGGCGGGCCGGCGAGCGATCGCATTGGGCGGCGGCGGCGAT GGCGACCCACGCCCCCAAGGGCTACCTCTGCGCGGGGAGCTCGTCGTTCGATGATCCCGA CGTGGTCGAGGTGACGCCGGCGGCGGCCGCGGCAGGGGGGTGGAGCTCCGGCCACCAGAA GCGGAAGCGGAGTCAGGTTGTTCCTCATGAAGTAATTGAACTGGATGCTGATGATGATCC TGATGGAGTTGTGATTATTGGTGAAAAATCATCAGTTGATAAGAATAAGCAAGCTGTTGG ATATCCTATAGACTGGCTAAAGCATGCAAAGAGTAGTTTGGCTGGTGAAATTGCTGGCCC AAGTTCCTACCCATCAAAAAATCCTGATATATTACTTGGTGGCCTGAAAATATTTCAAGA GAACCCATTTTACAACAACATTGATGACTATGCTTATGAGGCATTTGAAGAAGATTATGG TTATGATGAAGATGAGTATGATGATTACGATTATGATAGTACACTTTATGAAAGTGAATA TAACTTCACTTTGGCTTCCAAGTTTGATGGTTTGGATATCCCACCTGGTGTGGAGGCTCC TTTACCATGGTTGCAGACGACTGCGGCAGAGATGGCAAATAAGACCAAACCTGTGAACAT GATGGATGATAAAATTGATGAAAAATACAGTGCATTTAAGCAATTCGATACTGTTGATGA TCACAGTGATCATTATTATTCGAAGCCAGATTTAAGAAAGGTTCAGGTAGTGAAAAAGCC TTCAAAAGAATGGGCAAAGCGTATTCAGCACGAGTGGAAAGTTCTAGAAAAAGATTTACC AGATACCATATTCGTGAGGGCATATGAGGATAGAATGGACCTGCTTAGAGCTGTTATTAC GGGACCAGCAGGCACTCCCTATCATGATGGTCTCTTCTTCTTTGACATTTACTTCCCTCC TCATTATCCGAGTGTACCTCCACTGGTGAACTATCGGTCTGGTGGGTTGCGGCTTAATCC AAACTTGTATGCTTGCGGGAAGGTGTGCCTTAGCCTGTTGAACACCTGGTCTGGTAGTGG ATGTGAGAGGTGGAGTCCTTCAAACTCAACAATGCTACAAGTCCTGGTCTCAGTTCAGGC TTTGGTGTTGAATGCCAAACCTTATTTCAATGAGCCTGGATATGCCATGCATGCTAATAC ACCTCATGGCGAGAAGAGTTCATTAACTTATAATGAAGATACTTTCCTGCTATCCTGCAG GACAATGCTATATTCTCTGCGAAATCCACCAAAGCATTTTGAGGATTTTATCGCCGGTCA TTTCCGCAAGTATGGCCAGAGCATCCTGATAGCTTGCAGAGCCTATCTGGACGGTGCCCA AGTTGGATGTCTTGTTGGAAATGGTGTGCAGGATGTCGATGAGGGCGACAAGAGCTGCTC GGCGAGGTTTAAGAGCGCGCTGAAGAGATTATTTGAGGAACTTCTGATGGAATTCACTGT CAAGGGAGCAGAGTGTGACAAATTCCTAGCTGAGAAGGCCAAAGCCGCGGCTTCTAGAGC TCCAGCAGACACCACATTGAGGCTATAAGTTGATAGCCTCGCGTGGTCGATAGACGGGAG TAATAATTTCGCTATTGAAATAGGATCCTCAACTCATTATGCCCCCGGATTCTAACCGTT TCCTGGAAGTAGCCTATGTAAATAGCCTTGTAGTTGCCCCGGTAAACATAAACGACATAT CCGTGTTTGTATTTAGGGGCTATATATCTTTTTTCCCCATAGCATGAGGGTGTCGTCTAC CTGCGGAGCCTTAATCCGCTGTGTATGTGATTGACGCCACACCATCTTGGCCTTCTGAAG AATATCATATTGAACTCTTATCAGCAGATCCCTGCTTCTACGCTGGAATTCAGCTAGAAT GCTAGATTATCAGTTGGTTTGTGC