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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0556900-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:27695307:27697298:1 gene:Os05g0556900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L35Ae family protein. (Os05t0556900-01);Similar to 60S ribosomal protein l33-b (Fragment). (Os05t0556900-02)
Sequence

ATGAAGGGACGGCAAGGCCAGCGCGTGAGGCTGTACGTCCGCGGCACCATCCTCGGCTAC
AAGAGGTCGAAGTCGAACCAGTACGAGAACACGTCGCTGCTGCAGATCGAGGGGGTGAAC
ACCAAGGAGGAGGTTGGGTGGTACGCCGGGAAGCGCATCGCCTACGTCTACAAGGCCAAG
ACGAAGAGCAACGACTCCACCATCCGCTGCATCTGGGGCAAGGTCACCCGCCCGCACGGC
AACTCCGGTGTCGTCCGCGCCAAGTTCCGGTCCAACCTCCCGCCCACCTCCATGGGCAAG
AAGGTCCGCGTCTTCATGTACCCCAGCAGCATCTAA

Peptide Sequence

PEP ID

Os05t0556900-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:27695307:27697298:1 gene:Os05g0556900 transcript:Os05t0556900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L35Ae family protein. (Os05t0556900-01);Similar to 60S ribosomal protein l33-b (Fragment). (Os05t0556900-02)
Sequence

MKGRQGQRVRLYVRGTILGYKRSKSNQYENTSLLQIEGVNTKEEVGWYAGKRIAYVYKAK
TKSNDSTIRCIWGKVTRPHGNSGVVRAKFRSNLPPTSMGKKVRVFMYPSSI

Transcript Sequence

Transcript ID

Os05t0556900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:27695307:27697298:1 gene:Os05g0556900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L35Ae family protein. (Os05t0556900-01);Similar to 60S ribosomal protein l33-b (Fragment). (Os05t0556900-02)
Sequence

GATTTCACTCGCCGCCGCCGCCGCCGCCTCCCTACTCTCTGCCGCCGCCGTCGCCGCCGC
TTGCTCCGTACTCCTCCTCTTCAGCGGCGATGAAGGGACGGCAAGGCCAGCGCGTGAGGC
TGTACGTCCGCGGCACCATCCTCGGCTACAAGAGGTCGAAGTCGAACCAGTACGAGAACA
CGTCGCTGCTGCAGATCGAGGGGGTGAACACCAAGGAGGAGGTTGGGTGGTACGCCGGGA
AGCGCATCGCCTACGTCTACAAGGCCAAGACGAAGAGCAACGACTCCACCATCCGCTGCA
TCTGGGGCAAGGTCACCCGCCCGCACGGCAACTCCGGTGTCGTCCGCGCCAAGTTCCGGT
CCAACCTCCCGCCCACCTCCATGGGCAAGAAGGTCCGCGTCTTCATGTACCCCAGCAGCA
TCTAAAAGCATCCAAGGTTTCTTGCCTATGCTGCGAAACTGATAGTTGTCACCGTGGAGG
GTTTTATATCAGCTAGTCACTTGGTTAACCAGTCAGAAATTTAAGCGGTTTTGAGGAGTT
TTAGCTTTTCTTTTTATTTCGGACTATTTGCTGTATCATGATGACAATTATTTGAAGGCT
TTTTAGCGGATTTGAAGCTACAGAGGTTTAGCATTTGTATCGTGATCTCAGCCGTTTGAT
ATCGTATCTGTATATCTAAATTTGGTTGGCACTGCTCGTTGAGTATATTTGAAAATGATA
GGCAGATGGATTCAGTGGTTC