Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0556300-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:27660691:27664963:1 gene:Os05g0556300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0089 domain containing protein. (Os05t0556300-01)
Sequence	ATGGATCCTCGCTCGACGGCCGATCCTGCCAGCTCGAGTACTTCCACCCACTCCACCACC ACCACCTCCCCTACCCCTACCCCCTCCCCCTCCTCGCTGCGGAAGCGGGTGCTCTCGATA GACACGTCGTCGCGTGACTCGCGTGGCTCGCCCGGCAGGGAGAGGGAGAGCAAGGCGCGG CAGGAGGAGGAGGAGGAGGAGAGCGTGATGGCATCGGCGGCGGCGTCGGAGGCGGAGAGG GAGAGGGACGTGGAGGCCGCGGTGCCGGTGCCGATGAGCCCGGCGGGGCGGCTGTTCCGG GAGACCAACTTCAACTGCTACATCGTGGCGGTGATCGGGCTCGGCGCCCGGGTGGACGTC GCGGCGGCGCGCGCCGGGCTGGAGGCCACCCTCGTCCGCCACCCCCGCTTCTGCAGCGTC CAGGTGTCGGATGAGGCGAGCAAGCGGGCGAAGCCACGGTGGGTCCGGACGACAGTGAAC CTGGACGACCACCTCATCTTCCCCGAGCTGGACCCCACCGCCACGTCAGCCAGCCCCGAC CAGGTCATCGAGGACTACATGTCCACGCTGTCCACGCAGCCGATGGACCACTCCCGCCCG CTCTGGGAGCTCCACGTCCTCGACTTCCCGACCTCCGAGGCGGCCGCCACCGTCGCCGTC AGGATGCACCACTCCCTCGGCGACGGCATCTCGCTGCTGTCCCTCCTCATCGCGTGCACG CGCAGCGCCGCCGACCCGGCGAGGCTGCCGGCGCTGCCGCCGGCGCCGGCGCGGCGGGAC GGGCCAGTGTACGCACGCCGGCGACCGCCGCTCTCGGCGGGGATCGTGGCGCTCGCCGCG TGGGCCTGGTCCTACCTCGTGCTCGCCTTGCACACGCTCGTCGACGTCGCCTGCTTCGTC GCGACGTCGCTGTTCCTCCGCGACGCGCGCACGCCGCTCATGGGGACGGAGGGCGTCGAG TTCCGGCGCAAGCGGTTCGTCCACTGCACGCTCAGCCTCGACGACGTCAAGCTCGTCAAG AATGCCATGAAGTGTACTGTGAATGATGTGTTAGTTGGAGTGACTTCTGCAGCATTGTCG CGCTATTACTTCCGCAAAGAAAATGATACGAACAGCGAGAAGCGTACGCGACGAAAGCAC ATCCGTGTGCGGTCTGCTCTTCTTGTTAACATCAGGAAAACACCTGGCTTACATGTATTG GCAGAAATGATGAATTCCAACAAGAACAATGTTGCGAGATGGGGAAATCTAATTGGTTAC ATCGTACTTCCTTTCCGTATAGCCATGTTCCACGATCCTCTTGAATATATTCGTCAGGGG AAAAGAACAGTTGACAGGAAGAAGAGCTCGTTGGAAGCAATCTTCACTTATTGGAGCGGC AACCTAATAGTCAAACTTTTTGGCATTAAGACTGCAGCTGCTCTCTGCCATGGCATGCTC GCTAATACCACTCTGTCATTCTCGAGCATGGTCGGACCTGCAGAGAAGGTGGAGTTCTAC GGGCATCCTATCGAGTACATTGCCCCAAGTGTATATGGGCATCCACATGCACTGACAGTA CATTACCAGAGCTACATGAACATTATCAAGCTTGTCCTCGCCGTCGATGATGCACAGTTC CCGGATGCTCACCAGCTGCTGGATGATTTCGCTGAGTCCCTCAGGCTTATCCGGCAGGCA GCTTCAACAAAATCATAG

Peptide Sequence

PEP ID	Os05t0556300-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:27660691:27664963:1 gene:Os05g0556300 transcript:Os05t0556300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0089 domain containing protein. (Os05t0556300-01)
Sequence	MDPRSTADPASSSTSTHSTTTTSPTPTPSPSSLRKRVLSIDTSSRDSRGSPGRERESKAR QEEEEEESVMASAAASEAERERDVEAAVPVPMSPAGRLFRETNFNCYIVAVIGLGARVDV AAARAGLEATLVRHPRFCSVQVSDEASKRAKPRWVRTTVNLDDHLIFPELDPTATSASPD QVIEDYMSTLSTQPMDHSRPLWELHVLDFPTSEAAATVAVRMHHSLGDGISLLSLLIACT RSAADPARLPALPPAPARRDGPVYARRRPPLSAGIVALAAWAWSYLVLALHTLVDVACFV ATSLFLRDARTPLMGTEGVEFRRKRFVHCTLSLDDVKLVKNAMKCTVNDVLVGVTSAALS RYYFRKENDTNSEKRTRRKHIRVRSALLVNIRKTPGLHVLAEMMNSNKNNVARWGNLIGY IVLPFRIAMFHDPLEYIRQGKRTVDRKKSSLEAIFTYWSGNLIVKLFGIKTAAALCHGML ANTTLSFSSMVGPAEKVEFYGHPIEYIAPSVYGHPHALTVHYQSYMNIIKLVLAVDDAQF PDAHQLLDDFAESLRLIRQAASTKS

Transcript Sequence

Transcript ID	Os05t0556300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:27660691:27664963:1 gene:Os05g0556300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0089 domain containing protein. (Os05t0556300-01)
Sequence	GAACCCGCACGCAACCCCCGGTCCCGGTCCTCCCCCGGCCGGACGCCGGAGTCCGCAAGG CAAGCCCCCAAACGCCGCCGTCGCTGTCCCCACCGTCAAGCCGCCCCCGACCGCGTCCAC ATTCCACACTTGCCACCGCCCGTACAAGCGCCGATGGATCCTCGCTCGACGGCCGATCCT GCCAGCTCGAGTACTTCCACCCACTCCACCACCACCACCTCCCCTACCCCTACCCCCTCC CCCTCCTCGCTGCGGAAGCGGGTGCTCTCGATAGACACGTCGTCGCGTGACTCGCGTGGC TCGCCCGGCAGGGAGAGGGAGAGCAAGGCGCGGCAGGAGGAGGAGGAGGAGGAGAGCGTG ATGGCATCGGCGGCGGCGTCGGAGGCGGAGAGGGAGAGGGACGTGGAGGCCGCGGTGCCG GTGCCGATGAGCCCGGCGGGGCGGCTGTTCCGGGAGACCAACTTCAACTGCTACATCGTG GCGGTGATCGGGCTCGGCGCCCGGGTGGACGTCGCGGCGGCGCGCGCCGGGCTGGAGGCC ACCCTCGTCCGCCACCCCCGCTTCTGCAGCGTCCAGGTGTCGGATGAGGCGAGCAAGCGG GCGAAGCCACGGTGGGTCCGGACGACAGTGAACCTGGACGACCACCTCATCTTCCCCGAG CTGGACCCCACCGCCACGTCAGCCAGCCCCGACCAGGTCATCGAGGACTACATGTCCACG CTGTCCACGCAGCCGATGGACCACTCCCGCCCGCTCTGGGAGCTCCACGTCCTCGACTTC CCGACCTCCGAGGCGGCCGCCACCGTCGCCGTCAGGATGCACCACTCCCTCGGCGACGGC ATCTCGCTGCTGTCCCTCCTCATCGCGTGCACGCGCAGCGCCGCCGACCCGGCGAGGCTG CCGGCGCTGCCGCCGGCGCCGGCGCGGCGGGACGGGCCAGTGTACGCACGCCGGCGACCG CCGCTCTCGGCGGGGATCGTGGCGCTCGCCGCGTGGGCCTGGTCCTACCTCGTGCTCGCC TTGCACACGCTCGTCGACGTCGCCTGCTTCGTCGCGACGTCGCTGTTCCTCCGCGACGCG CGCACGCCGCTCATGGGGACGGAGGGCGTCGAGTTCCGGCGCAAGCGGTTCGTCCACTGC ACGCTCAGCCTCGACGACGTCAAGCTCGTCAAGAATGCCATGAAGTGTACTGTGAATGAT GTGTTAGTTGGAGTGACTTCTGCAGCATTGTCGCGCTATTACTTCCGCAAAGAAAATGAT ACGAACAGCGAGAAGCGTACGCGACGAAAGCACATCCGTGTGCGGTCTGCTCTTCTTGTT AACATCAGGAAAACACCTGGCTTACATGTATTGGCAGAAATGATGAATTCCAACAAGAAC AATGTTGCGAGATGGGGAAATCTAATTGGTTACATCGTACTTCCTTTCCGTATAGCCATG TTCCACGATCCTCTTGAATATATTCGTCAGGGGAAAAGAACAGTTGACAGGAAGAAGAGC TCGTTGGAAGCAATCTTCACTTATTGGAGCGGCAACCTAATAGTCAAACTTTTTGGCATT AAGACTGCAGCTGCTCTCTGCCATGGCATGCTCGCTAATACCACTCTGTCATTCTCGAGC ATGGTCGGACCTGCAGAGAAGGTGGAGTTCTACGGGCATCCTATCGAGTACATTGCCCCA AGTGTATATGGGCATCCACATGCACTGACAGTACATTACCAGAGCTACATGAACATTATC AAGCTTGTCCTCGCCGTCGATGATGCACAGTTCCCGGATGCTCACCAGCTGCTGGATGAT TTCGCTGAGTCCCTCAGGCTTATCCGGCAGGCAGCTTCAACAAAATCATAGAAGCAGCTA GACTGTTTTTTCTCTCACTTTTTGAGATTGGTAGTAAGCACAAAGAATCACAGTGCACCC TCCAATCAGTAAAAACTTAGTTGTACCACAATTTTCAGCATTCAATATTCTTGTCACAAT AAAATGGCCCCATCTGGACTGCCTAATTTTGACACC