Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0556100-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:27648092:27653659:-1 gene:Os05g0556100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:dynamin-related protein 1A description:Similar to SDL5A. (Os05t0556100-01)
Sequence	ATGGAGAACCTGATCTCGCTCGTCAACAAGCTGCAGCGGGCCTGCACCGCCCTCGGCGAC CACGGCGAGGAGAGCGCCCTCCCCACCCTCTGGGACTCGCTGCCGGCCATCGCCGTCGTC GGAGGCCAGAGTTCGGGTAAATCCTCGGTGCTGGAGAGCGTTGTTGGGAAGGATTTCCTA CCAAGAGGCTCAGGCATTGTCACCCGTCGTCCCTTGGTGCTGCAGCTTCATAGGATCGAC GGAGACAGAGAATATGCAGAGTTCATGCACCTTCCCAGGAAGAGATTCACTGATTTCGCT CTTGTGAGGAAGGAGATAGCTGATGAAACTGACAGAGAAACTGGTCGTTCAAAGCAAATA TCATCGGTCCCTATTCATTTAAGCATATATTCTCCAAATGTTGTGAACCTGACTCTTATC GATCTTCCTGGGCTTACTAAAGTTGCTGTTGAGGGTCAGCCTGACAGTATTGTTCAGGAC ATTGAAAACATGGTTCGCTCGTTCATAGAAAAGCCCAATTGTATCATTCTGGCTGTTTCT CCAGCCAATCAGGATCTTGCAACTTCTGATGCAATTAAGATTTCACGGGAAGTTGACCCC AAAGGTGAAAGGACGTTTGGTGTGCTTACAAAAATTGATCTAATGGACAAGGGCACCGAT GCTGTTGATATATTGGAAGGCAGATCATACCGGCTCCAACAACAATGGATTGGTGTCGTC AATCGATCTCAGCAGGATATCAACAAGAATGTGGACATGATTGCTGCTAGGCGCAGAGAG CGTGAATATTTTTCAACTACGCCAGAATACAAGCACCTTGCTCATAGGATGGGATCAGAA CATTTAGCAAAGAGTCTCTCGAAGCATTTGGAGACTGTTATTAAGTCAAGAATCCCAGGG CTCCAATCTCTCATTACAAAGACAATTGCCGAACTGGAGACAGAACTTAATCGACTTGGG AAGCCCATTGCTACAGATGCTGGAGGAAAGCTGTACACGATCATGGAAATATGCCGCATG TTTGATGGTATCTACAAAGAACATCTGGATGGAGTGCGTCCTGGTGGTGAGAAAATCTAT CATGTCTTTGACAATCAGTTTCCTGTAGCCATTAAACGGTTGCAGTTTGACAAACAACTG GCAATGGAAAATGTGAAAAAGCTCATAACGGAGGCTGATGGATACCAACCTCATTTAATA GCTCCAGAGCAAGGATATCGACGGCTCATAGAGTCTTGTCTTGTTAGTATCAGAGGTCCT GCTGAGGCAGCTGTGGATGCGGTCCATGCGATACTCAAGGAATTAGTGCACAAGGCCATC AATGAAACACATGAGCTGAAGCAGTTCCCCACTCTTCGTGTGGAAGTAGGCAATGCGGCT TTTGAGTCATTGGACAGAATGAGGGATGAAAGCAAGAAAAACACATTAAAGCTTGTTGAT ATGGAATGCAGCTACTTAACCGTAGATTTCTTCAGGAAACTTCCCCAGGATGTTGAGAAG GGTGGAAATCCAAGCCACTCTATTTTTGATAGATATAATGATTCTTATCTTAGACGAATT GGAACAACGGTTCTGGCATATATTAACATGGTATGTTCAACCTTGAGGAACTCTATTCCG AAATCTATTGTCTACTGTCAAGTGCGGGAGGCAAAGCGCTCACTGCTCGATCACTTCTTT ACTGAATTGGGAGCAAGAGAGATTAAACAACTTTCTAAGCTTCTTGATGAAGACCCCGCC GTCATGGAACGGAGGACTAATCTTGCGAAGAGGCTGGAGCTATATCGGAGTGCTCAAGCA GAAATTGATGCGGTTGCATGGTCCAAATAG

Peptide Sequence

PEP ID	Os05t0556100-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:27648092:27653659:-1 gene:Os05g0556100 transcript:Os05t0556100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:dynamin-related protein 1A description:Similar to SDL5A. (Os05t0556100-01)
Sequence	MENLISLVNKLQRACTALGDHGEESALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFL PRGSGIVTRRPLVLQLHRIDGDREYAEFMHLPRKRFTDFALVRKEIADETDRETGRSKQI SSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSFIEKPNCIILAVS PANQDLATSDAIKISREVDPKGERTFGVLTKIDLMDKGTDAVDILEGRSYRLQQQWIGVV NRSQQDINKNVDMIAARRREREYFSTTPEYKHLAHRMGSEHLAKSLSKHLETVIKSRIPG LQSLITKTIAELETELNRLGKPIATDAGGKLYTIMEICRMFDGIYKEHLDGVRPGGEKIY HVFDNQFPVAIKRLQFDKQLAMENVKKLITEADGYQPHLIAPEQGYRRLIESCLVSIRGP AEAAVDAVHAILKELVHKAINETHELKQFPTLRVEVGNAAFESLDRMRDESKKNTLKLVD MECSYLTVDFFRKLPQDVEKGGNPSHSIFDRYNDSYLRRIGTTVLAYINMVCSTLRNSIP KSIVYCQVREAKRSLLDHFFTELGAREIKQLSKLLDEDPAVMERRTNLAKRLELYRSAQA EIDAVAWSK

Transcript Sequence

Transcript ID	Os05t0556100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:27648092:27653659:-1 gene:Os05g0556100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:dynamin-related protein 1A description:Similar to SDL5A. (Os05t0556100-01)
Sequence	GGCGCACCACCATACACAGCCCGAGGCCGCGCAGCTCTCGACCCCGACGCGGCTCGGCAG TCGGCATCGCCAACCCTCATCTCCCCCCCTCCTCTCCACCGACCTCGATCTCGCCCCTCC CCCCACGCGCGCGATCTCGCCCAGATCTCGCTGAGCCGCCGCCGCCGCCGCAGCAGCAGC GGCCATGGAGAACCTGATCTCGCTCGTCAACAAGCTGCAGCGGGCCTGCACCGCCCTCGG CGACCACGGCGAGGAGAGCGCCCTCCCCACCCTCTGGGACTCGCTGCCGGCCATCGCCGT CGTCGGAGGCCAGAGTTCGGGTAAATCCTCGGTGCTGGAGAGCGTTGTTGGGAAGGATTT CCTACCAAGAGGCTCAGGCATTGTCACCCGTCGTCCCTTGGTGCTGCAGCTTCATAGGAT CGACGGAGACAGAGAATATGCAGAGTTCATGCACCTTCCCAGGAAGAGATTCACTGATTT CGCTCTTGTGAGGAAGGAGATAGCTGATGAAACTGACAGAGAAACTGGTCGTTCAAAGCA AATATCATCGGTCCCTATTCATTTAAGCATATATTCTCCAAATGTTGTGAACCTGACTCT TATCGATCTTCCTGGGCTTACTAAAGTTGCTGTTGAGGGTCAGCCTGACAGTATTGTTCA GGACATTGAAAACATGGTTCGCTCGTTCATAGAAAAGCCCAATTGTATCATTCTGGCTGT TTCTCCAGCCAATCAGGATCTTGCAACTTCTGATGCAATTAAGATTTCACGGGAAGTTGA CCCCAAAGGTGAAAGGACGTTTGGTGTGCTTACAAAAATTGATCTAATGGACAAGGGCAC CGATGCTGTTGATATATTGGAAGGCAGATCATACCGGCTCCAACAACAATGGATTGGTGT CGTCAATCGATCTCAGCAGGATATCAACAAGAATGTGGACATGATTGCTGCTAGGCGCAG AGAGCGTGAATATTTTTCAACTACGCCAGAATACAAGCACCTTGCTCATAGGATGGGATC AGAACATTTAGCAAAGAGTCTCTCGAAGCATTTGGAGACTGTTATTAAGTCAAGAATCCC AGGGCTCCAATCTCTCATTACAAAGACAATTGCCGAACTGGAGACAGAACTTAATCGACT TGGGAAGCCCATTGCTACAGATGCTGGAGGAAAGCTGTACACGATCATGGAAATATGCCG CATGTTTGATGGTATCTACAAAGAACATCTGGATGGAGTGCGTCCTGGTGGTGAGAAAAT CTATCATGTCTTTGACAATCAGTTTCCTGTAGCCATTAAACGGTTGCAGTTTGACAAACA ACTGGCAATGGAAAATGTGAAAAAGCTCATAACGGAGGCTGATGGATACCAACCTCATTT AATAGCTCCAGAGCAAGGATATCGACGGCTCATAGAGTCTTGTCTTGTTAGTATCAGAGG TCCTGCTGAGGCAGCTGTGGATGCGGTCCATGCGATACTCAAGGAATTAGTGCACAAGGC CATCAATGAAACACATGAGCTGAAGCAGTTCCCCACTCTTCGTGTGGAAGTAGGCAATGC GGCTTTTGAGTCATTGGACAGAATGAGGGATGAAAGCAAGAAAAACACATTAAAGCTTGT TGATATGGAATGCAGCTACTTAACCGTAGATTTCTTCAGGAAACTTCCCCAGGATGTTGA GAAGGGTGGAAATCCAAGCCACTCTATTTTTGATAGATATAATGATTCTTATCTTAGACG AATTGGAACAACGGTTCTGGCATATATTAACATGGTATGTTCAACCTTGAGGAACTCTAT TCCGAAATCTATTGTCTACTGTCAAGTGCGGGAGGCAAAGCGCTCACTGCTCGATCACTT CTTTACTGAATTGGGAGCAAGAGAGATTAAACAACTTTCTAAGCTTCTTGATGAAGACCC CGCCGTCATGGAACGGAGGACTAATCTTGCGAAGAGGCTGGAGCTATATCGGAGTGCTCA AGCAGAAATTGATGCGGTTGCATGGTCCAAATAGTCCTGATCATCTACTTATCATACTCA TGTTTCTCCTTTACTCCCAGTTGGTGATCCTCCCCTATCTTGGGGCATATATAGCTGATT TTACCCCGTTCTAGGTCATTCATAGATCAACGCAGCTGTGAGGTGTCATTTGGTTTGTGC TTTTGTTCCTTGTGCTTGAGGATCTAGGAGACACCAGGCTGCTGTACTTTTTGTATTACG ACCAAGTTCATATATCGTGTTTAATTTTTGTCACAGCCCATTCTTTCGTTCCGTTTACAT ATATCGTCTTCAATTTGTTACT