Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0556000-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:27643324:27647653:1 gene:Os05g0556000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Oxoglutarate/iron-dependent oxygenase domain containing protein. (Os05t0556000-01);Oxoglutarate/iron-dependent oxygenase domain containing protein. (Os05t0556000-02)
Sequence	ATGGAGATTGGTCGTCTCGTGCGGAAGCAGACGCAGCCAGGCTGGGCACCAACCACCCGA GGAGGAGGAAGACGACGACCACTCGCTCTCGCGCTCGGGCGGCTCTCGTCCCGTCGTCCG GTGCGGTGCCGCTGCCTCGCCGCCATGCAGACTTCGCCGCCGCCGCCGTCCGTGCGCACG GTCTCCATCCCCTTCTCCGACCTCAAGGAGAGGGATAGGGACCTGAGCGGGAAGATCGAG GAAGGGCTCGGGCCCAACGGGCTCGGGATCATCTCCATTGCTGACGTGCCTGGTTTTCCC GTGCTAAGGAAAACGTTGCTGCGCCTGGCACCAAAATTTGCAAACCTTCCTGAAGATGTG AAGAAAGAACTTGAAGACCCAGACAGCAGGTTTAACTTTGGATGGAGTCATGGGAAAGAG AAACTTGAGTCAGGGAAACTCGACACATTCAAAGGCTCCTTTTATGCCAACCCAATTTTG GATGCTCCAACCACTGATGATGTACTTGTGAGAAGGTACCCATCTTATTGCCGAACAAAT ATATGGCCAGCCAGTCATCTTCCTGAGCTCGAAATAGCATTTAAAGCTCTTGGAAAGCTG ATGTTGGAAGTTGGCTTGATGTTGGCTCATCATTGTGATCGCTATGTAATGCAGCAAGGA GTGGGACCATATGATGGTGAAAGCCTTGAGCAGACAATTGCCAGCTCAAGGTGTCACAAG GGCCGCCTTCTGTATTACTACCCCCGGCAATTTAGTAAACAAGAGGAAGGTGGTTCTGTT TCATCGTGGTGTGGATGGCATACTGACCATGGATCTTTAACAGGACTTACATGTGCCTTG TTTACGAAAAATTCAATGGAGATCCCCTGTCCTGATAGTGCTGCTGGATTGTATATAAGG ACTCGTGATGATAAAGTTGTTAAGGTTACATTTGAGGAGAATGAATTGGCTTACCAAGTT GGAGAAACCACTGAAATACTATCAAGAGGTCGTCTATGTGCAACTCCACACTGTGTGAAG GCCCCCAGCAGTGAAAACGCCTCGAATGTTGATCGTTCGACCTTCGCGATGTTCATGCAA CCAGATTGGGATGAAAAGCTCAAGTTTCCAAGTGAAATTCCGTATCATCAAGAGTTGATC CCACCGAATGGAACTCTTACATTCGGGGAGTATTCAGAAAGATTGGTGAACAAGTATTAC CAGGGAAAGACATGA

Peptide Sequence

PEP ID	Os05t0556000-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:27643324:27647653:1 gene:Os05g0556000 transcript:Os05t0556000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Oxoglutarate/iron-dependent oxygenase domain containing protein. (Os05t0556000-01);Oxoglutarate/iron-dependent oxygenase domain containing protein. (Os05t0556000-02)
Sequence	MEIGRLVRKQTQPGWAPTTRGGGRRRPLALALGRLSSRRPVRCRCLAAMQTSPPPPSVRT VSIPFSDLKERDRDLSGKIEEGLGPNGLGIISIADVPGFPVLRKTLLRLAPKFANLPEDV KKELEDPDSRFNFGWSHGKEKLESGKLDTFKGSFYANPILDAPTTDDVLVRRYPSYCRTN IWPASHLPELEIAFKALGKLMLEVGLMLAHHCDRYVMQQGVGPYDGESLEQTIASSRCHK GRLLYYYPRQFSKQEEGGSVSSWCGWHTDHGSLTGLTCALFTKNSMEIPCPDSAAGLYIR TRDDKVVKVTFEENELAYQVGETTEILSRGRLCATPHCVKAPSSENASNVDRSTFAMFMQ PDWDEKLKFPSEIPYHQELIPPNGTLTFGEYSERLVNKYYQGKT

Transcript Sequence

Transcript ID	Os05t0556000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:27643324:27647653:1 gene:Os05g0556000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Oxoglutarate/iron-dependent oxygenase domain containing protein. (Os05t0556000-01);Oxoglutarate/iron-dependent oxygenase domain containing protein. (Os05t0556000-02)
Sequence	TCTCAAAAAAAAGTAGTTGTTACACTCCTCCCGGCATTCGAGTCCCAGACGAATCCGACG CCGAGATAAGTGACGGGGGAGATGGAGATTGGTCGTCTCGTGCGGAAGCAGACGCAGCCA GGCTGGGCACCAACCACCCGAGGAGGAGGAAGACGACGACCACTCGCTCTCGCGCTCGGG CGGCTCTCGTCCCGTCGTCCGGTGCGGTGCCGCTGCCTCGCCGCCATGCAGACTTCGCCG CCGCCGCCGTCCGTGCGCACGGTCTCCATCCCCTTCTCCGACCTCAAGGAGAGGGATAGG GACCTGAGCGGGAAGATCGAGGAAGGGCTCGGGCCCAACGGGCTCGGGATCATCTCCATT GCTGACGTGCCTGGTTTTCCCGTGCTAAGGAAAACGTTGCTGCGCCTGGCACCAAAATTT GCAAACCTTCCTGAAGATGTGAAGAAAGAACTTGAAGACCCAGACAGCAGGTTTAACTTT GGATGGAGTCATGGGAAAGAGAAACTTGAGTCAGGGAAACTCGACACATTCAAAGGCTCC TTTTATGCCAACCCAATTTTGGATGCTCCAACCACTGATGATGTACTTGTGAGAAGGTAC CCATCTTATTGCCGAACAAATATATGGCCAGCCAGTCATCTTCCTGAGCTCGAAATAGCA TTTAAAGCTCTTGGAAAGCTGATGTTGGAAGTTGGCTTGATGTTGGCTCATCATTGTGAT CGCTATGTAATGCAGCAAGGAGTGGGACCATATGATGGTGAAAGCCTTGAGCAGACAATT GCCAGCTCAAGGTGTCACAAGGGCCGCCTTCTGTATTACTACCCCCGGCAATTTAGTAAA CAAGAGGAAGGTGGTTCTGTTTCATCGTGGTGTGGATGGCATACTGACCATGGATCTTTA ACAGGACTTACATGTGCCTTGTTTACGAAAAATTCAATGGAGATCCCCTGTCCTGATAGT GCTGCTGGATTGTATATAAGGACTCGTGATGATAAAGTTGTTAAGGTTACATTTGAGGAG AATGAATTGGCTTACCAAGTTGGAGAAACCACTGAAATACTATCAAGAGGTCGTCTATGT GCAACTCCACACTGTGTGAAGGCCCCCAGCAGTGAAAACGCCTCGAATGTTGATCGTTCG ACCTTCGCGATGTTCATGCAACCAGATTGGGATGAAAAGCTCAAGTTTCCAAGTGAAATT CCGTATCATCAAGAGTTGATCCCACCGAATGGAACTCTTACATTCGGGGAGTATTCAGAA AGATTGGTGAACAAGTATTACCAGGGAAAGACATGAAACACTACAATACGCATGCAATTT TCAATTGTTGTTTGTCCGTTTCGTACTAGCAGTGAAATCGTCAGTGCAACCTGGACAAAC TTAACTGTTAGGTTCTCTGCGTGTGTTTTGAACTGGAGATTCGAGCAACCAATCATAGAA AAAATGTGTCTACTGTAATTGTTTTTTCCTTACGATAAAAGCAACAACACCGGTGGCAGC GTCACCTTTTCTTGGTTC