Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0553800-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:27534280:27537659:1 gene:Os05g0553800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Anti-silencing protein-like (Anti-silencing function 1b) (Anti- silencing factor 1-like protein). (Os05t0553800-01);Hypothetical conserved gene. (Os05t0553800-02)
Sequence	ATGAGCGCGGTGAACATAACCAACGTGGCGGTGCTGGACAACCCCACCGCCTTCCTCAAT CCCTTCCAGTTCGAGATCTCCTACGAGTGCCTCATCCCCCTCGACGACGATCTGGAGTGG AAGCTTATATATGTTGGATCTGCTGAAGATGAAAATTATGACCAACAATTAGAGAGTGTG CTTGTTGGCCCCGTCAATGTTGGGACCTACCGTTTTGTACTCCAGGCTGACCCACCGGAT CCCTCAAAGATCCGTGAAGAAGACATAATCGGCGTCACTGTGCTGCTATTGACATGTTCC TACATGGGACAGGAGTTCATGAGAGTAGGTTACTATGTGAACAATGATTATGACGATGAG CAACTGAGGGAGGAACCCCCGGCAAAGCTTCTAATAGACAGGGTGCAGAGGAACATTCTG GCTGACAAGCCCCGAGTCACCAAGTTCCCAATCAACTTCCATCCTGAACCCAGTACGAGC GCAGGGCAGCAGCAGCAGGAGCCACAGACAGCTTCGCCGGAAAACCACACAGGCGGTGAA GGAAGTAAGCCCGCTGCTGATCAATGA

Peptide Sequence

PEP ID	Os05t0553800-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:27534280:27537659:1 gene:Os05g0553800 transcript:Os05t0553800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Anti-silencing protein-like (Anti-silencing function 1b) (Anti- silencing factor 1-like protein). (Os05t0553800-01);Hypothetical conserved gene. (Os05t0553800-02)
Sequence	MSAVNITNVAVLDNPTAFLNPFQFEISYECLIPLDDDLEWKLIYVGSAEDENYDQQLESV LVGPVNVGTYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYMGQEFMRVGYYVNNDYDDE QLREEPPAKLLIDRVQRNILADKPRVTKFPINFHPEPSTSAGQQQQEPQTASPENHTGGE GSKPAADQ

Transcript Sequence

Transcript ID	Os05t0553800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:27534280:27537659:1 gene:Os05g0553800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Anti-silencing protein-like (Anti-silencing function 1b) (Anti- silencing factor 1-like protein). (Os05t0553800-01);Hypothetical conserved gene. (Os05t0553800-02)
Sequence	GAGGCGTACTAAAATTGGGGAATCTCGTGAAGTCTCTCCTCCCTCTCAGTTTTCCCGTTC GTCTCCAAACCTGCGAGAGGCGGCTCCCTCCCGCCATCCCGATTTGGCTTCCCGCCCCAA TTCCCGCCGCCGCATAAACCCTCCACAAAAGGGCTCCTCCGCCCTCGCCTCTCCCTCCCC ATCTCGCCTCGCCGCTCTCCAACCCATCGCCGCGGCCGCGCGCGATTCCTCGCCTCCGCG GCGAGCCTCTCCTCTCTTCCTCCGCCCGGCGGCGTTGGCGTTGGCGGCGGCGGCGGCGAT GAGCGCGGTGAACATAACCAACGTGGCGGTGCTGGACAACCCCACCGCCTTCCTCAATCC CTTCCAGTTCGAGATCTCCTACGAGTGCCTCATCCCCCTCGACGACGATCTGGAGTGGAA GCTTATATATGTTGGATCTGCTGAAGATGAAAATTATGACCAACAATTAGAGAGTGTGCT TGTTGGCCCCGTCAATGTTGGGACCTACCGTTTTGTACTCCAGGCTGACCCACCGGATCC CTCAAAGATCCGTGAAGAAGACATAATCGGCGTCACTGTGCTGCTATTGACATGTTCCTA CATGGGACAGGAGTTCATGAGAGTAGGTTACTATGTGAACAATGATTATGACGATGAGCA ACTGAGGGAGGAACCCCCGGCAAAGCTTCTAATAGACAGGGTGCAGAGGAACATTCTGGC TGACAAGCCCCGAGTCACCAAGTTCCCAATCAACTTCCATCCTGAACCCAGTACGAGCGC AGGGCAGCAGCAGCAGGAGCCACAGACAGCTTCGCCGGAAAACCACACAGGCGGTGAAGG AAGTAAGCCCGCTGCTGATCAATGATCAGAGTGGGGATGCTAACATTTTGATGCCCGTGC CTTTTAGGATATCTTGTGATGCTGTGAGAGTGGTGATTATGCTTCTTCATTCTCCTAGGT TTGTCATTGGTGTCTCGTCTTTTGGAAGGCAAATTGTTCCCTAGTTCCTGGTGGTTGCTG AAAACTGTATGTTCTCTTGAAATCTGCCAATCTGGTTAAGAGTACTTGCGCAAGTTCTGT TTCATCAAATGCTGGATGCTTCTTTTGTCTAGACTATAGTTGTTGAGTATTATGTGTTTA GGGGTATATTAGTAATTTCCTATCTCTATTGTACTCATATATGCCCTTTGGGCTAACACA ATAGCAACTGTTCATTCTCC