Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0550250-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:27323596:27325180:-1 gene:Os05g0550250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to seed maturation protein. (Os05t0550250-00)
Sequence

ATGAATGTTCCTCATGTTTCGAGTGATTCTGATGATGATCGACCGGTGATAAGGCTTTTT
CATAGGCAGAAACCAGTTCATAAGATCCTGGGTGGCCGGAAAGTTGCGGACATCATGCTA
TGGAGGGACAGGAATTTATCGGCCGGGATCCTTGCAGGCGCCACATTGATATGGTTCCTA
TTTGATGTGGCTGAATACAACTTAGTAACACTCCTTTGCCACATTGCACTCCTTGGGATG
CTTGTGCTCTTCATTTGGTCCAATGCTGCACCTCTCTTTGACAGGGCACCTCCACGGATC
CCAGAAGTGATTGTTTCTGAACATGCCTTCAGAGAACTTGCACTGACATTGCATTCCAAA
GTGGCGCACTTTTCAGCAGTCCTGTATGACATTTCATGCGGGAAAGAACTCAGGAAGTTC
CTTGCGGTGATAGGATCTCTGTGGATATTGGCAGTTATTGGAGAGACATGCAGTTTCACA
ACTCTACTATATGTTGGGTTTTTGTGTGCTCTCACTTTGCCTGCGCTGTATGAAAGATAT
GAGACTGAAGTAGACCATTTGGTTGCCAAAGGTGGTCAAGACCTCAAGAAATTCTACAAG
AAGATTGATTCCAATGTGCTGAATAAGATACCAAGGGGGCCTGTCAAGACAAAAGTTCAC
TAA

Peptide Sequence

PEP ID

Os05t0550250-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:27323596:27325180:-1 gene:Os05g0550250 transcript:Os05t0550250-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to seed maturation protein. (Os05t0550250-00)
Sequence

MNVPHVSSDSDDDRPVIRLFHRQKPVHKILGGRKVADIMLWRDRNLSAGILAGATLIWFL
FDVAEYNLVTLLCHIALLGMLVLFIWSNAAPLFDRAPPRIPEVIVSEHAFRELALTLHSK
VAHFSAVLYDISCGKELRKFLAVIGSLWILAVIGETCSFTTLLYVGFLCALTLPALYERY
ETEVDHLVAKGGQDLKKFYKKIDSNVLNKIPRGPVKTKVH

Transcript Sequence

Transcript ID

Os05t0550250-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:27323596:27325180:-1 gene:Os05g0550250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to seed maturation protein. (Os05t0550250-00)
Sequence

GTGCTAGTATCCTAGGGCTTATAAGGCCAAGAGTCATGTAACCTGACCAATTAACCATAG
TAGCCAAACACAAATCTCCCACAATAATAACTCAGGCAACATGAATGTTCCTCATGTTTC
GAGTGATTCTGATGATGATCGACCGGTGATAAGGCTTTTTCATAGGCAGAAACCAGTTCA
TAAGATCCTGGGTGGCCGGAAAGTTGCGGACATCATGCTATGGAGGGACAGGAATTTATC
GGCCGGGATCCTTGCAGGCGCCACATTGATATGGTTCCTATTTGATGTGGCTGAATACAA
CTTAGTAACACTCCTTTGCCACATTGCACTCCTTGGGATGCTTGTGCTCTTCATTTGGTC
CAATGCTGCACCTCTCTTTGACAGGGCACCTCCACGGATCCCAGAAGTGATTGTTTCTGA
ACATGCCTTCAGAGAACTTGCACTGACATTGCATTCCAAAGTGGCGCACTTTTCAGCAGT
CCTGTATGACATTTCATGCGGGAAAGAACTCAGGAAGTTCCTTGCGGTGATAGGATCTCT
GTGGATATTGGCAGTTATTGGAGAGACATGCAGTTTCACAACTCTACTATATGTTGGGTT
TTTGTGTGCTCTCACTTTGCCTGCGCTGTATGAAAGATATGAGACTGAAGTAGACCATTT
GGTTGCCAAAGGTGGTCAAGACCTCAAGAAATTCTACAAGAAGATTGATTCCAATGTGCT
GAATAAGATACCAAGGGGGCCTGTCAAGACAAAAGTTCACTAAGATATACTACAAGAGAT
ATCAATGCATATAAATAGCTTCATAAATAAAAGAAATGTTGGTTTGATGGAAAGTGAGCT
TAGAGCTCCATTTCAGTT