Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0549700-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:27290608:27292481:1 gene:Os05g0549700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS). (Os05t0549700-01);Similar to Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS). (Os05t0549700-02)
Sequence	ATGGCGGCCACCACCCACGCCGCCTCCCTCTCCTTCCTCCTCTCTCACCCCCACCCCACC TCCCCCAACCCTAACCCTAACCCTAACCTCCCCCTCCGCCGCGCCCCCCACCGCGTCCGC TGCGCCACCGACGCCGCCGCCACCAGGCACCGGCGCGCGGCCGACGAGAACATCCGGGAG GAGGCGGCGAGGCACCGCGCCCCGAACCACAACTTCTCCGCGTGGTACGCGCCCTTCCCG CCCGCCCCCAACGGCGACCCCGACGAGCGCTACTCCCTGGACGAGATCGTCTACCGCTCC AGCTCGGGCGGCCTCCTCGACGTGCGCCACGACATGGACGCGCTCGCCCGCTTCCCGGGC TCCTACTGGCGCGACCTCTTCGACTCCCGCGTCGGCCGCACCACCTGGCCCTTCGGCTCC GGCGTCTGGTCCAAGAAGGAGTTCGTCCTCCCCGAGATCGACCCCGACCACATCGTCTCC CTCTTCGAGGGCAACTCCAACCTCTTCTGGGCGGAGCGCCTCGGCCGCGACCACCTCGCC GGGATGAACGACCTCTGGGTCAAGCACTGCGGCATCTCCCACACCGGATCGTTCAAGGAT CTCGGCATGACGGTGCTCGTCAGCCAGGTGAACCGCCTCCGCCGCGCGCCGCTCTCCCGC CCCATCGCCGGAGTCGGGTGCGCCTCCACGGGGGACACCTCCGCCGCGCTCTCGGCCTAC TGCGCCGCCGCGGGGATCCCGGCCATTGTGTTCCTCCCCGCCAACCGCATCTCGCTCGAG CAGCTCATCCAGCCCATTGCCAATGGCGCCACCGTGCTCTCGCTCGACACGGACTTCGAC GGCTGCATGCGGCTCATCAGGGAGGTGACTGCCGAGCTGCCGATTTACCTTGCGAATTCA TTGAATTCCCTTCGGCTCGAGGGGCAGAAGACTGCTGCTATTGAGATTCTTCAGCAGTTC GATTGGGAGGTGCCGGATTGGGTCATTGTTCCCGGAGGCAATCTTGGGAACATATATGCC TTCTACAAGGGATTCGAGATGTGCCGCGTCCTTGGGCTCGTCGATCGTGTGCCGCGGCTT GTCTGCGCGCAGGCTGCCAATGCGAACCCGCTGTACCGGTACTACAAGTCGGGGTGGACT GAGTTCACGCCGCAGGTGGCTGAGCCGACATTTGCATCGGCAATTCAGATTGGTGACCCG GTATCTGTCGATCGCGCGGTGGTTGCGCTCAAGGCAACTGATGGCATCGTCGAGGAGGCC ACGGAGGAGGAACTCATGAACGCAATGTCGCTCGCTGATCGCACTGGCATGTTTGCTTGC CCGCATACTGGGGTTGCCCTCGCAGCACTGTTCAAGCTCCGTGACCAGCGCATCATCGGG CCAAATGACCGCACGGTAGTCGTCAGCACAGCTCATGGTCTGAAGTTCTCACAGTCCAAG ATCGACTACCATGACAGCAAGATCGAAGACATGGCCTGCAAGTATGCGAATCCCCCGGTC AGCGTGAAGGCTGACTTCGGTGCCGTCATGGATGTCCTCAAGAAGAGGCTCAAGGGTAAG CTCTGA

Peptide Sequence

PEP ID	Os05t0549700-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:27290608:27292481:1 gene:Os05g0549700 transcript:Os05t0549700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS). (Os05t0549700-01);Similar to Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS). (Os05t0549700-02)
Sequence	MAATTHAASLSFLLSHPHPTSPNPNPNPNLPLRRAPHRVRCATDAAATRHRRAADENIRE EAARHRAPNHNFSAWYAPFPPAPNGDPDERYSLDEIVYRSSSGGLLDVRHDMDALARFPG SYWRDLFDSRVGRTTWPFGSGVWSKKEFVLPEIDPDHIVSLFEGNSNLFWAERLGRDHLA GMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRRAPLSRPIAGVGCASTGDTSAALSAY CAAAGIPAIVFLPANRISLEQLIQPIANGATVLSLDTDFDGCMRLIREVTAELPIYLANS LNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFEMCRVLGLVDRVPRL VCAQAANANPLYRYYKSGWTEFTPQVAEPTFASAIQIGDPVSVDRAVVALKATDGIVEEA TEEELMNAMSLADRTGMFACPHTGVALAALFKLRDQRIIGPNDRTVVVSTAHGLKFSQSK IDYHDSKIEDMACKYANPPVSVKADFGAVMDVLKKRLKGKL

Transcript Sequence

Transcript ID	Os05t0549700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:27290608:27292481:1 gene:Os05g0549700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS). (Os05t0549700-01);Similar to Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS). (Os05t0549700-02)
Sequence	CCTCCCACTCGCCGCCGCCGCCGCCAACTTTCCCCACCACCACCACCCATGGCGGCCACC ACCCACGCCGCCTCCCTCTCCTTCCTCCTCTCTCACCCCCACCCCACCTCCCCCAACCCT AACCCTAACCCTAACCTCCCCCTCCGCCGCGCCCCCCACCGCGTCCGCTGCGCCACCGAC GCCGCCGCCACCAGGCACCGGCGCGCGGCCGACGAGAACATCCGGGAGGAGGCGGCGAGG CACCGCGCCCCGAACCACAACTTCTCCGCGTGGTACGCGCCCTTCCCGCCCGCCCCCAAC GGCGACCCCGACGAGCGCTACTCCCTGGACGAGATCGTCTACCGCTCCAGCTCGGGCGGC CTCCTCGACGTGCGCCACGACATGGACGCGCTCGCCCGCTTCCCGGGCTCCTACTGGCGC GACCTCTTCGACTCCCGCGTCGGCCGCACCACCTGGCCCTTCGGCTCCGGCGTCTGGTCC AAGAAGGAGTTCGTCCTCCCCGAGATCGACCCCGACCACATCGTCTCCCTCTTCGAGGGC AACTCCAACCTCTTCTGGGCGGAGCGCCTCGGCCGCGACCACCTCGCCGGGATGAACGAC CTCTGGGTCAAGCACTGCGGCATCTCCCACACCGGATCGTTCAAGGATCTCGGCATGACG GTGCTCGTCAGCCAGGTGAACCGCCTCCGCCGCGCGCCGCTCTCCCGCCCCATCGCCGGA GTCGGGTGCGCCTCCACGGGGGACACCTCCGCCGCGCTCTCGGCCTACTGCGCCGCCGCG GGGATCCCGGCCATTGTGTTCCTCCCCGCCAACCGCATCTCGCTCGAGCAGCTCATCCAG CCCATTGCCAATGGCGCCACCGTGCTCTCGCTCGACACGGACTTCGACGGCTGCATGCGG CTCATCAGGGAGGTGACTGCCGAGCTGCCGATTTACCTTGCGAATTCATTGAATTCCCTT CGGCTCGAGGGGCAGAAGACTGCTGCTATTGAGATTCTTCAGCAGTTCGATTGGGAGGTG CCGGATTGGGTCATTGTTCCCGGAGGCAATCTTGGGAACATATATGCCTTCTACAAGGGA TTCGAGATGTGCCGCGTCCTTGGGCTCGTCGATCGTGTGCCGCGGCTTGTCTGCGCGCAG GCTGCCAATGCGAACCCGCTGTACCGGTACTACAAGTCGGGGTGGACTGAGTTCACGCCG CAGGTGGCTGAGCCGACATTTGCATCGGCAATTCAGATTGGTGACCCGGTATCTGTCGAT CGCGCGGTGGTTGCGCTCAAGGCAACTGATGGCATCGTCGAGGAGGCCACGGAGGAGGAA CTCATGAACGCAATGTCGCTCGCTGATCGCACTGGCATGTTTGCTTGCCCGCATACTGGG GTTGCCCTCGCAGCACTGTTCAAGCTCCGTGACCAGCGCATCATCGGGCCAAATGACCGC ACGGTAGTCGTCAGCACAGCTCATGGTCTGAAGTTCTCACAGTCCAAGATCGACTACCAT GACAGCAAGATCGAAGACATGGCCTGCAAGTATGCGAATCCCCCGGTCAGCGTGAAGGCT GACTTCGGTGCCGTCATGGATGTCCTCAAGAAGAGGCTCAAGGGTAAGCTCTGAAGTGTG TTTGGCTAACTCCCCTCCAATCAATTGCTGTATGTCAGTTGTCTTCTGCATCAAATTCGA ATGCGGCGGGTGACTGTGGAGCGATGATTCGTCGATTTGTAGTAGTATTGTAGGTCCCTG AACCTTGAAGATCGTCCATGCTTGAGAGTAAAGATTGAGAGGCTATCTCTTGTACCTGTT CTGTGTTGTGTGTGGGTGGGTAATAAGCGACTACCTTGTTGTTTGAAACTCTGAATAATC AGATCATCTAGTCC