Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0549100-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:27245446:27249427:-1 gene:Os05g0549100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:STN7 kinase description:Similar to serine/threonine-protein kinase SNT7. (Os05t0549100-01);Similar to Serine/threonine-protein kinase SNT7, chloroplast precursor (EC 2.7.1.37) (Stt7 homolog). (Os05t0549100-02)
Sequence	ATGGCCACCGGTAGCCTTGGCCTCTCCACCTCCTTCCTCCCCGGCCACGACACCCTCCTC CGCCGCCGCCGGCGGCGGCCGCCGGCGACGACGGCGGCGTCGTTCCGCCCGGTGACGGCG GAGCTCGGCGGGGAGCTGGGGCGGCAGCTGGTGGAGGCGGTCGGGGTGGGGCTCCCCTGC ACGGTGATGGCGTGCGGCGACGTCATCTACCGCAGCACGCTCCCCCGCAACGACGGGCTC ACCATCACCGCCCCCGGCGTGGCGCTCGCCCTCGCCGCCGCGTCCTACCTCTGGTCCACC CCCGGCGTCGCGCCGGGCTTCTTCGACATGTTCGTGCTCGCCTTCGCCGAGCGCGTCTTC CGCCCCACCTTCCGCAAGGATGAATTCGTGCTCGGGAAGAAGCTTGGGGAGGGCGCGTTC GGAGTCGTCTACAAGGCGTCGCTGGATGACCCCAAAGCTGCGGAGAAGCAAGGTGCTGTG GTTGTGAAGAAGGCAACAGAGTATGGTGCGGTAGAAATATGGATGAACGAGCGTGTCAGG AGGGCCTGTGCTAGCAGCTGTGCAGATTTTATTTATGGCTTTCGTGAGAGCAAAGCTAAA GGTAAGGGAGCTGATGAATACTGGCTTATTTGGCGTTATGAAGGTGAGGATACACTATTC GATCTCATGCAAAGCAAGGAGTTCCCTTACAATGTTGAGACTAAGATTCTAGGAGATGTT CAAGACCTGCCAAAGGGAATAGCAAGAGAGAATAAGATTATTCAAACAGTAATGAGACAA CTGTTATTTGCTCTTGATGGCCTTCATTCGACAGGGATTGTTCACAGAGACGTAAAACCC CAAAATGTGATATTTTCGGAAGGATCTCGTACGTTCAAAATTATTGATCTTGGAGCAGCA GCTGATTTGCGAGTGGGCATCAACTATATTCCTAGTGAGTTCCTTTTAGATCCAAGGTAT GCTGCACCGGAGCAATATATAATGAGCACTCAAACACCATCTGCTCCCTCTGCTCCAGTT GCAACTGCTTTATCTCCAGTCCTTTGGCAGTTGAACCTTCCTGACAGATTTGACATATAT AGCCTGGGCCTTATATTCTTACAAATGGCATTTCCATCATTGAGAACGGACAGCAGCCTC ATACAATTTAACCGCCAACTGAAGAGGTGCAACTATGACTTAGAAGCTTGGAGGAATTTG GTAGAGCCACGAGCTACCCCGGAGCTCCGGAGGGGCTTTGACATCTTGGATTTAGATGGT GGTATTGGATGGGAACTTCTCACATCGATGGTCCGGTACAAAGCACGGCAAAGGACTGGT GCTAAGGCTGCACTGGCGCATCCATATTTCAACCGCGAGGGGCTCCTTGGCCTCTCTGTA ATGCAAAACTTGAGGCTGCAACTGCTTCGTGCAACCCAGAAGGACTACAGTGAAGCAGCC CGTTGGGTCGTCGGCCTCATGGCAAGATCAGGAACAGAAGCAGAAGGAGGTTTTACAGAG GCACAACTTCAAGAGCTTAGGGAAATCAAACCAAAGAAAGGTAGTGCACGGAGGAACTTG CTTGCTTCCGTGCTGCGTGTACAGAGAAAGGTCGTGAGGACAATCAACGAAAGCATGGAT GAGCTTAGCAGCCAGAGCAAAAGCATTTGGTGGAGCCGGTGGATACCAAAGGAGGAGTAG

Peptide Sequence

PEP ID	Os05t0549100-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:27245446:27249427:-1 gene:Os05g0549100 transcript:Os05t0549100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:STN7 kinase description:Similar to serine/threonine-protein kinase SNT7. (Os05t0549100-01);Similar to Serine/threonine-protein kinase SNT7, chloroplast precursor (EC 2.7.1.37) (Stt7 homolog). (Os05t0549100-02)
Sequence	MATGSLGLSTSFLPGHDTLLRRRRRRPPATTAASFRPVTAELGGELGRQLVEAVGVGLPC TVMACGDVIYRSTLPRNDGLTITAPGVALALAAASYLWSTPGVAPGFFDMFVLAFAERVF RPTFRKDEFVLGKKLGEGAFGVVYKASLDDPKAAEKQGAVVVKKATEYGAVEIWMNERVR RACASSCADFIYGFRESKAKGKGADEYWLIWRYEGEDTLFDLMQSKEFPYNVETKILGDV QDLPKGIARENKIIQTVMRQLLFALDGLHSTGIVHRDVKPQNVIFSEGSRTFKIIDLGAA ADLRVGINYIPSEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIY SLGLIFLQMAFPSLRTDSSLIQFNRQLKRCNYDLEAWRNLVEPRATPELRRGFDILDLDG GIGWELLTSMVRYKARQRTGAKAALAHPYFNREGLLGLSVMQNLRLQLLRATQKDYSEAA RWVVGLMARSGTEAEGGFTEAQLQELREIKPKKGSARRNLLASVLRVQRKVVRTINESMD ELSSQSKSIWWSRWIPKEE

Transcript Sequence

Transcript ID	Os05t0549100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:27245446:27249427:-1 gene:Os05g0549100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:STN7 kinase description:Similar to serine/threonine-protein kinase SNT7. (Os05t0549100-01);Similar to Serine/threonine-protein kinase SNT7, chloroplast precursor (EC 2.7.1.37) (Stt7 homolog). (Os05t0549100-02)
Sequence	GAATCCAAGAAAAAAAAAAGAAAGCAAAAATGGCCACCGGTAGCCTTGGCCTCTCCACCT CCTTCCTCCCCGGCCACGACACCCTCCTCCGCCGCCGCCGGCGGCGGCCGCCGGCGACGA CGGCGGCGTCGTTCCGCCCGGTGACGGCGGAGCTCGGCGGGGAGCTGGGGCGGCAGCTGG TGGAGGCGGTCGGGGTGGGGCTCCCCTGCACGGTGATGGCGTGCGGCGACGTCATCTACC GCAGCACGCTCCCCCGCAACGACGGGCTCACCATCACCGCCCCCGGCGTGGCGCTCGCCC TCGCCGCCGCGTCCTACCTCTGGTCCACCCCCGGCGTCGCGCCGGGCTTCTTCGACATGT TCGTGCTCGCCTTCGCCGAGCGCGTCTTCCGCCCCACCTTCCGCAAGGATGAATTCGTGC TCGGGAAGAAGCTTGGGGAGGGCGCGTTCGGAGTCGTCTACAAGGCGTCGCTGGATGACC CCAAAGCTGCGGAGAAGCAAGGTGCTGTGGTTGTGAAGAAGGCAACAGAGTATGGTGCGG TAGAAATATGGATGAACGAGCGTGTCAGGAGGGCCTGTGCTAGCAGCTGTGCAGATTTTA TTTATGGCTTTCGTGAGAGCAAAGCTAAAGGTAAGGGAGCTGATGAATACTGGCTTATTT GGCGTTATGAAGGTGAGGATACACTATTCGATCTCATGCAAAGCAAGGAGTTCCCTTACA ATGTTGAGACTAAGATTCTAGGAGATGTTCAAGACCTGCCAAAGGGAATAGCAAGAGAGA ATAAGATTATTCAAACAGTAATGAGACAACTGTTATTTGCTCTTGATGGCCTTCATTCGA CAGGGATTGTTCACAGAGACGTAAAACCCCAAAATGTGATATTTTCGGAAGGATCTCGTA CGTTCAAAATTATTGATCTTGGAGCAGCAGCTGATTTGCGAGTGGGCATCAACTATATTC CTAGTGAGTTCCTTTTAGATCCAAGGTATGCTGCACCGGAGCAATATATAATGAGCACTC AAACACCATCTGCTCCCTCTGCTCCAGTTGCAACTGCTTTATCTCCAGTCCTTTGGCAGT TGAACCTTCCTGACAGATTTGACATATATAGCCTGGGCCTTATATTCTTACAAATGGCAT TTCCATCATTGAGAACGGACAGCAGCCTCATACAATTTAACCGCCAACTGAAGAGGTGCA ACTATGACTTAGAAGCTTGGAGGAATTTGGTAGAGCCACGAGCTACCCCGGAGCTCCGGA GGGGCTTTGACATCTTGGATTTAGATGGTGGTATTGGATGGGAACTTCTCACATCGATGG TCCGGTACAAAGCACGGCAAAGGACTGGTGCTAAGGCTGCACTGGCGCATCCATATTTCA ACCGCGAGGGGCTCCTTGGCCTCTCTGTAATGCAAAACTTGAGGCTGCAACTGCTTCGTG CAACCCAGAAGGACTACAGTGAAGCAGCCCGTTGGGTCGTCGGCCTCATGGCAAGATCAG GAACAGAAGCAGAAGGAGGTTTTACAGAGGCACAACTTCAAGAGCTTAGGGAAATCAAAC CAAAGAAAGGTAGTGCACGGAGGAACTTGCTTGCTTCCGTGCTGCGTGTACAGAGAAAGG TCGTGAGGACAATCAACGAAAGCATGGATGAGCTTAGCAGCCAGAGCAAAAGCATTTGGT GGAGCCGGTGGATACCAAAGGAGGAGTAGGCAGACGCAGCTCTGTCCCTCTGTGCATCGC CCATTTCTTCTGTAGAAACCTCGCCATGTAGCAATGGTAATGGTACAGCCTACTTACTTC CCTACCTCTGGTGAGTACAAATCGTCGTTCCATCGGAAAAAGACCACAATAGCATATACC GATGTCCAAATAGGTGTACATATATTTGACATGGAACCAAAATTTTCAGAGACCCTTATG ATAAGTTCATAACAGATCC