Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0549000-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:27236794:27243388:-1 gene:Os05g0549000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Epsin-like, N-terminal domain containing protein. (Os05t0549000-01);Epsin-like, N-terminal domain containing protein. (Os05t0549000-02)
Sequence	ATGGCGGCGATGCAGAGCTGGCGCAAGGCGTACGGCGCGCTCAAGGACTCCACCACCGTC AGCCTCGCCAACCTCAACTCCGACTTCAAGGATCTGGATGTGGCGATCGTGAAGGCGACT AACCACGTGGAGTGCCCTCCCAAGGAGCGCCACCTGCGCAAGATTGTTGCCGCGACGTCC ATCGCTCGGCCTCGGGCAGACGTCGCCTATTGTATCCACGCGCTTTCCCGCCGGCTTGCA AAAACACGCAATTGGATTGTAGCCTTGAAAACACTTGTAGTGATCCATAGACTTCTTCGA GAGGGTGACCCTACTTTTCGAGAAGAGCTTCTTAATTTTGCACAGAGGGGGCGTATTTTG CAGCTCTCAAACTTCAAGGATGACTCCAGTCCAATTGCTTGGGACTGTTCTGCATGGGTT CGTACATATGGTCTGTTTCTGGAGGAAAGATTGGAATGCTTCAGGGTCCTCAAGTATGAC GTTGAAGCTGAACGTTTGTCCAAACAAGGTCAAGGTCCTGAAAAGGGGCACAGCAGAACC AGAGAATTGGAGTCCCAGGATCTGTTAGAGCAGTTGCCAGCTTTGCAGCAGTTACTATAT CGACTTGTTGGATGTCGGCCGGAAGGAGCTGCAAATAATAACTACTTGGTGCAATATGCT CTAGCTTTGGTGCTAAAAGAGAGCTTCAAAATATATTGTGCAATAAACGATGGGATTATT AACCTTGTTGATAAGTTTTTTGAGATGCCAAGACATGAAGCACTCAAAGCCCTTGAAATT TACAGGAGGGCAGGCCAACAGGCTGGGAGCCTATCTGACTTCTATGAAAATTGCCGGGGT CTAGAACTTGCTAGGAATTTCCAATTTCCCACTCTGAGGGAGCCGCCACAAACATTTCTT GTCACTATGGAAGAGTATGTGAGGGAGGCTCCACGCATGGTTCCAGTGCGAGAACCATTG GAATTACCTGAGAGGCTTCTTCTGACATATAAACCTGAAGAACAAGAGGAAGATTCTGTG CCTGATCCTGTCGAAGAGGAAAAACCACCTGTTGAAGAACCTGTTCCAGTACCACCTGTT ACTGAAGCTGTTTCACCTCCTCCTCCTCCCAAGACTAAGGTGGCAGATACTGGTGATCTA CTGGGATTAAATGATCCGAACCCTAGTGTATCAGCGATAGAAGAAAGCAACGCTCTGGCT TTGGCCATTGTTCCAGCAGATGCTGGTGCTTCAACATCCAGCACCGCTACATGGCAAGAT AAAGGATTTGATCCAACAGGGTGGGAACTCGCCCTTGTTACCACTCCAAGTAACACGAAT TCATCTGCTGCAGATAGTCAACTGGGTGGTGGGTTTGACAAGCTCATCTTGGAAAGCCTA TATGACCAGGGGGACTACAGGCAGAGACAGCAACAGCAGTTATATGGTTCTTCAGCTCCC AACCCGTTCATGTCAAATGATCCTTTCGTAATGTCGAACCAAGTTGCTCCTCCACCATCG GTTCAAATGGCTGCCATGTCTCAGCAGCATCAACAGATACCAACTATGATGCAAGCGAAT CCCTTTGGACCACCAATGCAACCGCAGCATGTGGGCATGGGCCCTGCAACAAACCCATTT TTGGATTCTGGTTTTGGCCCATTCCCAATGGCGAACAACGGGCATCAGCAAGCCAACCCA TTTGGTGGCACCCAACTTCTGTAG

Peptide Sequence

PEP ID	Os05t0549000-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:27236794:27243388:-1 gene:Os05g0549000 transcript:Os05t0549000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Epsin-like, N-terminal domain containing protein. (Os05t0549000-01);Epsin-like, N-terminal domain containing protein. (Os05t0549000-02)
Sequence	MAAMQSWRKAYGALKDSTTVSLANLNSDFKDLDVAIVKATNHVECPPKERHLRKIVAATS IARPRADVAYCIHALSRRLAKTRNWIVALKTLVVIHRLLREGDPTFREELLNFAQRGRIL QLSNFKDDSSPIAWDCSAWVRTYGLFLEERLECFRVLKYDVEAERLSKQGQGPEKGHSRT RELESQDLLEQLPALQQLLYRLVGCRPEGAANNNYLVQYALALVLKESFKIYCAINDGII NLVDKFFEMPRHEALKALEIYRRAGQQAGSLSDFYENCRGLELARNFQFPTLREPPQTFL VTMEEYVREAPRMVPVREPLELPERLLLTYKPEEQEEDSVPDPVEEEKPPVEEPVPVPPV TEAVSPPPPPKTKVADTGDLLGLNDPNPSVSAIEESNALALAIVPADAGASTSSTATWQD KGFDPTGWELALVTTPSNTNSSAADSQLGGGFDKLILESLYDQGDYRQRQQQQLYGSSAP NPFMSNDPFVMSNQVAPPPSVQMAAMSQQHQQIPTMMQANPFGPPMQPQHVGMGPATNPF LDSGFGPFPMANNGHQQANPFGGTQLL

Transcript Sequence

Transcript ID	Os05t0549000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:27236794:27243388:-1 gene:Os05g0549000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Epsin-like, N-terminal domain containing protein. (Os05t0549000-01);Epsin-like, N-terminal domain containing protein. (Os05t0549000-02)
Sequence	GAGAGAGAGAGAGAAACCACCCCAAAATTAGCGAGGCGAGGAGGAGGAGGCGGAGGAGGG GAGCCGCAGGAATGGCGGCGATGCAGAGCTGGCGCAAGGCGTACGGCGCGCTCAAGGACT CCACCACCGTCAGCCTCGCCAACCTCAACTCCGACTTCAAGGATCTGGATGTGGCGATCG TGAAGGCGACTAACCACGTGGAGTGCCCTCCCAAGGAGCGCCACCTGCGCAAGATTGTTG CCGCGACGTCCATCGCTCGGCCTCGGGCAGACGTCGCCTATTGTATCCACGCGCTTTCCC GCCGGCTTGCAAAAACACGCAATTGGATTGTAGCCTTGAAAACACTTGTAGTGATCCATA GACTTCTTCGAGAGGGTGACCCTACTTTTCGAGAAGAGCTTCTTAATTTTGCACAGAGGG GGCGTATTTTGCAGCTCTCAAACTTCAAGGATGACTCCAGTCCAATTGCTTGGGACTGTT CTGCATGGGTTCGTACATATGGTCTGTTTCTGGAGGAAAGATTGGAATGCTTCAGGGTCC TCAAGTATGACGTTGAAGCTGAACGTTTGTCCAAACAAGGTCAAGGTCCTGAAAAGGGGC ACAGCAGAACCAGAGAATTGGAGTCCCAGGATCTGTTAGAGCAGTTGCCAGCTTTGCAGC AGTTACTATATCGACTTGTTGGATGTCGGCCGGAAGGAGCTGCAAATAATAACTACTTGG TGCAATATGCTCTAGCTTTGGTGCTAAAAGAGAGCTTCAAAATATATTGTGCAATAAACG ATGGGATTATTAACCTTGTTGATAAGTTTTTTGAGATGCCAAGACATGAAGCACTCAAAG CCCTTGAAATTTACAGGAGGGCAGGCCAACAGGCTGGGAGCCTATCTGACTTCTATGAAA ATTGCCGGGGTCTAGAACTTGCTAGGAATTTCCAATTTCCCACTCTGAGGGAGCCGCCAC AAACATTTCTTGTCACTATGGAAGAGTATGTGAGGGAGGCTCCACGCATGGTTCCAGTGC GAGAACCATTGGAATTACCTGAGAGGCTTCTTCTGACATATAAACCTGAAGAACAAGAGG AAGATTCTGTGCCTGATCCTGTCGAAGAGGAAAAACCACCTGTTGAAGAACCTGTTCCAG TACCACCTGTTACTGAAGCTGTTTCACCTCCTCCTCCTCCCAAGACTAAGGTGGCAGATA CTGGTGATCTACTGGGATTAAATGATCCGAACCCTAGTGTATCAGCGATAGAAGAAAGCA ACGCTCTGGCTTTGGCCATTGTTCCAGCAGATGCTGGTGCTTCAACATCCAGCACCGCTA CATGGCAAGATAAAGGATTTGATCCAACAGGGTGGGAACTCGCCCTTGTTACCACTCCAA GTAACACGAATTCATCTGCTGCAGATAGTCAACTGGGTGGTGGGTTTGACAAGCTCATCT TGGAAAGCCTATATGACCAGGGGGACTACAGGCAGAGACAGCAACAGCAGTTATATGGTT CTTCAGCTCCCAACCCGTTCATGTCAAATGATCCTTTCGTAATGTCGAACCAAGTTGCTC CTCCACCATCGGTTCAAATGGCTGCCATGTCTCAGCAGCATCAACAGATACCAACTATGA TGCAAGCGAATCCCTTTGGACCACCAATGCAACCGCAGCATGTGGGCATGGGCCCTGCAA CAAACCCATTTTTGGATTCTGGTTTTGGCCCATTCCCAATGGCGAACAACGGGCATCAGC AAGCCAACCCATTTGGTGGCACCCAACTTCTGTAGGTTGCATAGAAGAAGAGCATATCGT GTCCTAGCAAATGCGATTTTCGTGTGATTATATTATGCATTGTGCCTGGCCTTACTTGTA TGTCACTCGTGTAATTGATTTTGTGTATTGGCCTCGCCACACGGGGCTGGCAAGCAACCC TTGTAAAGAAATTAGTGGCCTGTGTAGCATCAGTTATATGTCAATAAATAGTATGACATG ATTACAAACC