Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0548200-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:27201104:27202593:-1 gene:Os05g0548200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Transcription initiation factor IIB (General transcription factor TFIIB). (Os05t0548200-01)
Sequence	ATGCACGACGCGGCGGCGAACGACGGGGCCTACTGCCCGGACTGCCGGCGCGCGACGGCG GTGGTGCTCGACCACACCACCGGCGACACCATCTGCACCGAGTGCGCGCTCGTCCTCGAC GCGCGCTACATCGACGAGACGTCCGAGTGGCGCACCTTCGCCAACGACGGCGCCAGCGAC GACCGCGACCCCAACCGCGTCGGCGACCGCGCCGACCCCTTCCTCCCCGACCACGTCGGC GGCACCACCATCGCCTACTCCTCCGCCCCGCCCAAGTCCGCCGACGCCGCCCCGCTGCTG ACGAGGAGGAGGGTCGACGTCGTCGGCCCGTCCCCGGAGAACGCGCTCGTCGCCGCGTTC AGGGGCATCGCCGACATGGCCGACCGCCTCGGCCTCGTCGCCACCATCCGCGACCGCGCC AAGGAGGTGTTCAAGAAGCTCGGCGAGGCGCCCACCAAGGGGTTACCGCGCGGCCGGAAC CGCGACGCCGTCTACGCCGCCTGCCTCTTCATCGCGTGCCGCAACGAGGGGATGCCGCGG ACGTACAAGGAGCTCGCCTCCGTCACCGCCGAGGGCGCCGCCGCCAAGAAGGAGATCGGC AGGCTCACCACCCTCATCAAGAAGCACCTCGGCGACCAGGGCGAGGGGCGGGCGATGGAC ATCGGCGTCGTGCGCTCCACCGACTACCTCCGCCGCTTCTGCTCCAGGCTCGGCCTGGGC CACCAGGACGTGCGCGCCGCCGGGGACGCGGTGCGCCGCCTCGAGGAGCGCCTCGACGTG CGCCGCAACCCGGAGTCCATCGCCGCCGCCATCATCTACATGGTCGTGCAGCGCGCCGGC GGCAGCAAGTCCGTGCGCGACGTCTCCACGGCCACCGGCGTCGCCGAGGGCACCATCACG GCGGCGCACAAGGAGCTGGCTCCCCACGCCAGCGTCCTCTTCGGTGGCTAG

Peptide Sequence

PEP ID	Os05t0548200-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:27201104:27202593:-1 gene:Os05g0548200 transcript:Os05t0548200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Transcription initiation factor IIB (General transcription factor TFIIB). (Os05t0548200-01)
Sequence	MHDAAANDGAYCPDCRRATAVVLDHTTGDTICTECALVLDARYIDETSEWRTFANDGASD DRDPNRVGDRADPFLPDHVGGTTIAYSSAPPKSADAAPLLTRRRVDVVGPSPENALVAAF RGIADMADRLGLVATIRDRAKEVFKKLGEAPTKGLPRGRNRDAVYAACLFIACRNEGMPR TYKELASVTAEGAAAKKEIGRLTTLIKKHLGDQGEGRAMDIGVVRSTDYLRRFCSRLGLG HQDVRAAGDAVRRLEERLDVRRNPESIAAAIIYMVVQRAGGSKSVRDVSTATGVAEGTIT AAHKELAPHASVLFGG

Transcript Sequence

Transcript ID	Os05t0548200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:27201104:27202593:-1 gene:Os05g0548200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Transcription initiation factor IIB (General transcription factor TFIIB). (Os05t0548200-01)
Sequence	TCAGTTTCCCCAACTCAACTCAACTCGTCTCCTCCCCGCACCCGCCGCCGCGATCGCGCG CGAGAGAGAGAAAAAAAGAGAAAAACCGAGCAGCTAAGCAAGAGCAAATGCACGACGCGG CGGCGAACGACGGGGCCTACTGCCCGGACTGCCGGCGCGCGACGGCGGTGGTGCTCGACC ACACCACCGGCGACACCATCTGCACCGAGTGCGCGCTCGTCCTCGACGCGCGCTACATCG ACGAGACGTCCGAGTGGCGCACCTTCGCCAACGACGGCGCCAGCGACGACCGCGACCCCA ACCGCGTCGGCGACCGCGCCGACCCCTTCCTCCCCGACCACGTCGGCGGCACCACCATCG CCTACTCCTCCGCCCCGCCCAAGTCCGCCGACGCCGCCCCGCTGCTGACGAGGAGGAGGG TCGACGTCGTCGGCCCGTCCCCGGAGAACGCGCTCGTCGCCGCGTTCAGGGGCATCGCCG ACATGGCCGACCGCCTCGGCCTCGTCGCCACCATCCGCGACCGCGCCAAGGAGGTGTTCA AGAAGCTCGGCGAGGCGCCCACCAAGGGGTTACCGCGCGGCCGGAACCGCGACGCCGTCT ACGCCGCCTGCCTCTTCATCGCGTGCCGCAACGAGGGGATGCCGCGGACGTACAAGGAGC TCGCCTCCGTCACCGCCGAGGGCGCCGCCGCCAAGAAGGAGATCGGCAGGCTCACCACCC TCATCAAGAAGCACCTCGGCGACCAGGGCGAGGGGCGGGCGATGGACATCGGCGTCGTGC GCTCCACCGACTACCTCCGCCGCTTCTGCTCCAGGCTCGGCCTGGGCCACCAGGACGTGC GCGCCGCCGGGGACGCGGTGCGCCGCCTCGAGGAGCGCCTCGACGTGCGCCGCAACCCGG AGTCCATCGCCGCCGCCATCATCTACATGGTCGTGCAGCGCGCCGGCGGCAGCAAGTCCG TGCGCGACGTCTCCACGGCCACCGGCGTCGCCGAGGGCACCATCACGGCGGCGCACAAGG AGCTGGCTCCCCACGCCAGCGTCCTCTTCGGTGGCTAGGGCTGCACGCCGCCGTGCCCCG CCATTGATTCTTGGGTTCTTGGCATGTGTTCGACGACATGCCAATGTCTTTCGACTTGGA CATGTGGAGTTCATGTGAACTTCGTTTCGTTAATCCGTGCTTGATTCGTTCTGTTTCAAG CTGACGAACCGAATTTGGACTTGGTTTCGTTAATCCGTGCTTGATTCATTCGGTCTCAAG CTGACGAACCGGATTTGGACCTGGTTTCGTTAATCCGTGCTTGATTCGTTCGGTTTCAAG CTGACGAACCTAATAGATAGAGATGCTGTTGCTCATTGCTCGTATTCGGGAATGAGCTGA TTAACGTTAGAGGCATCTGTTGCATGACCTCGGAAACGTGAAGCCTGTTCTTGCGAGACA ATCTGACAATTATTCAGATTTTTAGCAATGAGATTAGTGCCGTACTACGT