Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0545000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:27043471:27048544:1 gene:Os05g0545000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sec14-nodulin domain-containing protein 6, Sec14-nodulin domain protein 6 description:Similar to Phosphatidylinositol transfer-like protein IV. (Os05t0545000-01);Similar to Phosphatidylinositol transfer-like protein III. (Os05t0545000-02)
Sequence	ATGTCAGGACCACTCGATCGATTTGCCAGGCCATGTTTTGAAGGTTTTACGCATAATGAT GAAAAGAAAGAGATCAGATCTGACGCAGACAACTCCGAAGGAGAGAAGAAGACTAAAATT GGTTCTTTCAAGAAAAAGGCGATTAATGCCGGGAACAAATTCAGGCATTCCCTGAGGAGA AGAAGCAAAAAGAAAAATGAACCTCGGGGTTCCATTGAGGACATAAGGGATGTTCAAGAT CTTCAAGCTGTTGATGCATTTCGACAATGTTTAGTTGATGAGGACCTGTTGCCGCAACAG CATGATGATTATCACACAATGCTTAGGTTCCTCAAAGCACGGAAATTTGATGTTGAGAAA GCAAAGAGTATGTGGTCAGATATGCTTAAATGGAGAAAGGAATTTGGGGCTGACAATATA GAGGAGTTTGACTACACCGAGGCGGATGAGGTTATGAAATATTATCCACAATTTTACCAT GGAGTGGATAAAGAAGGAAGGCCTATCTACATAGAGTTAATAGGAAAAGTTGATGCGAAT AAGCTAATGCAAGTAACTACTATAGAGCGATATGTGAAATATCATGTGAAGGAGTTTGAG AGATGCTTCCAAATGAGATTTCCTGCCTGCTCGATTGCTGCAAAAAGGCCCATAGATTCA TCTACTACTATTCTGGACGTGCAAGGCGTGGGTTTAAAGAACTTCTCAAAAGCTGCAAGG GATCTAATCACACGACTGCAGAAGATCGACAATGACAACTACCCAGAGACGTTGCGCCGC ATGTATATTATTAATGCCGGCCAAGGCTTCAAGATGTTATGGAGCACTGTAAAATCTTTC CTAGATCCTAAAACTGCTTCAAAGATTCATGTTCTAGGAAGCAAGTACCAAAATAAGTTA CTTGAAATAATTGATGAGAATGAATTGCCAGAGTTTTTTGGTGGAAAATGCAAGTGCGAG GCATTTGGAGGTTGCAAAAAATCAGATAAAGGTCCTTGGAAGGATCCTAACATAATAAAG AGGGTCCTGAATGGCGAAGCAAATTATGGGAGGCAAATTGTGACCATATCAAGCACTGAT GGAAAAATAATTCGTTATGCTGGGCCACAATACCCAACAAGAAAAGGAAGTGATGGCTCA GCGGAGTCTGGGTCTGAAGTGGAAGATGGCGCGTCACCTATGGCATCAAGGAACCTGATA ACAAATCCCCTTTTGACCCCTGTTCATGAGGAGTCAAAATTGGCAGCACATGGATTTACA TCTGCTTCCCCTTCCATTATTGAAGAAAGCATTCCTGTTGTTGACAAGGTTGTGGATGAT GGATGGGGCAGTCCTAGAGCTAGTTCATCACCCTCGAGAAGTTTGCCTATCACATTTGAT GGCCTCTGGACACAAGTTATCACATGGCTGACTGTCTTGATCGTGAGCCTTTTTGCTATG GTTCGCTCTGTCCCAAGCAGGATGGCTAAAAGATTCTCAAGCCAATCCACTGACCATGAT CACTCCTATGTGGAGTATCCTCAAGAAGCAGAGTACAAGGAAGAATTCCGGCCACCGTCT CCTGCTCCGTCTTATACTGAAAAGGATGTCCTCTCATCTATGGTAAGACGACTAGGCGAG TTGGAGGAGAAGGTGCAGGCGCTCGAAACGAAGCCATCCGAGATGCCATTTGAAAAGGAG GAATTGCTGAATGCAGCCGTCCGCCGTGTGGATGCATTAGAAGCCGAGTTAATCTCTACA AAGAAGGCTCTCTATGAAGCCCTGATGCGGCAGGACGAGCTGCTTGCGTACATTGACAAG CAAGATATGATCAAGTTTCGTAAAAAGAAATTCTGCTTCTAG

Peptide Sequence

PEP ID	Os05t0545000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:27043471:27048544:1 gene:Os05g0545000 transcript:Os05t0545000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sec14-nodulin domain-containing protein 6, Sec14-nodulin domain protein 6 description:Similar to Phosphatidylinositol transfer-like protein IV. (Os05t0545000-01);Similar to Phosphatidylinositol transfer-like protein III. (Os05t0545000-02)
Sequence	MSGPLDRFARPCFEGFTHNDEKKEIRSDADNSEGEKKTKIGSFKKKAINAGNKFRHSLRR RSKKKNEPRGSIEDIRDVQDLQAVDAFRQCLVDEDLLPQQHDDYHTMLRFLKARKFDVEK AKSMWSDMLKWRKEFGADNIEEFDYTEADEVMKYYPQFYHGVDKEGRPIYIELIGKVDAN KLMQVTTIERYVKYHVKEFERCFQMRFPACSIAAKRPIDSSTTILDVQGVGLKNFSKAAR DLITRLQKIDNDNYPETLRRMYIINAGQGFKMLWSTVKSFLDPKTASKIHVLGSKYQNKL LEIIDENELPEFFGGKCKCEAFGGCKKSDKGPWKDPNIIKRVLNGEANYGRQIVTISSTD GKIIRYAGPQYPTRKGSDGSAESGSEVEDGASPMASRNLITNPLLTPVHEESKLAAHGFT SASPSIIEESIPVVDKVVDDGWGSPRASSSPSRSLPITFDGLWTQVITWLTVLIVSLFAM VRSVPSRMAKRFSSQSTDHDHSYVEYPQEAEYKEEFRPPSPAPSYTEKDVLSSMVRRLGE LEEKVQALETKPSEMPFEKEELLNAAVRRVDALEAELISTKKALYEALMRQDELLAYIDK QDMIKFRKKKFCF

Transcript Sequence

Transcript ID	Os05t0545000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:27043471:27048544:1 gene:Os05g0545000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sec14-nodulin domain-containing protein 6, Sec14-nodulin domain protein 6 description:Similar to Phosphatidylinositol transfer-like protein IV. (Os05t0545000-01);Similar to Phosphatidylinositol transfer-like protein III. (Os05t0545000-02)
Sequence	TTGAGGAAAAAAACAATTTTAAAAAAGTATTTTGCCATGCAATTTTATCGTTCGGAGATG ATGGATTAGTTCCTTTTTCCCTTTCTTGGCATGATAGTTCTTGTGGATTTTTAGGTTGGA GCTTTTGCTCGGGCGATTGATTTTGGAATCGGAGGAGGGGATGTCAGGACCACTCGATCG ATTTGCCAGGCCATGTTTTGAAGGTTTTACGCATAATGATGAAAAGAAAGAGATCAGATC TGACGCAGACAACTCCGAAGGAGAGAAGAAGACTAAAATTGGTTCTTTCAAGAAAAAGGC GATTAATGCCGGGAACAAATTCAGGCATTCCCTGAGGAGAAGAAGCAAAAAGAAAAATGA ACCTCGGGGTTCCATTGAGGACATAAGGGATGTTCAAGATCTTCAAGCTGTTGATGCATT TCGACAATGTTTAGTTGATGAGGACCTGTTGCCGCAACAGCATGATGATTATCACACAAT GCTTAGGTTCCTCAAAGCACGGAAATTTGATGTTGAGAAAGCAAAGAGTATGTGGTCAGA TATGCTTAAATGGAGAAAGGAATTTGGGGCTGACAATATAGAGGAGTTTGACTACACCGA GGCGGATGAGGTTATGAAATATTATCCACAATTTTACCATGGAGTGGATAAAGAAGGAAG GCCTATCTACATAGAGTTAATAGGAAAAGTTGATGCGAATAAGCTAATGCAAGTAACTAC TATAGAGCGATATGTGAAATATCATGTGAAGGAGTTTGAGAGATGCTTCCAAATGAGATT TCCTGCCTGCTCGATTGCTGCAAAAAGGCCCATAGATTCATCTACTACTATTCTGGACGT GCAAGGCGTGGGTTTAAAGAACTTCTCAAAAGCTGCAAGGGATCTAATCACACGACTGCA GAAGATCGACAATGACAACTACCCAGAGACGTTGCGCCGCATGTATATTATTAATGCCGG CCAAGGCTTCAAGATGTTATGGAGCACTGTAAAATCTTTCCTAGATCCTAAAACTGCTTC AAAGATTCATGTTCTAGGAAGCAAGTACCAAAATAAGTTACTTGAAATAATTGATGAGAA TGAATTGCCAGAGTTTTTTGGTGGAAAATGCAAGTGCGAGGCATTTGGAGGTTGCAAAAA ATCAGATAAAGGTCCTTGGAAGGATCCTAACATAATAAAGAGGGTCCTGAATGGCGAAGC AAATTATGGGAGGCAAATTGTGACCATATCAAGCACTGATGGAAAAATAATTCGTTATGC TGGGCCACAATACCCAACAAGAAAAGGAAGTGATGGCTCAGCGGAGTCTGGGTCTGAAGT GGAAGATGGCGCGTCACCTATGGCATCAAGGAACCTGATAACAAATCCCCTTTTGACCCC TGTTCATGAGGAGTCAAAATTGGCAGCACATGGATTTACATCTGCTTCCCCTTCCATTAT TGAAGAAAGCATTCCTGTTGTTGACAAGGTTGTGGATGATGGATGGGGCAGTCCTAGAGC TAGTTCATCACCCTCGAGAAGTTTGCCTATCACATTTGATGGCCTCTGGACACAAGTTAT CACATGGCTGACTGTCTTGATCGTGAGCCTTTTTGCTATGGTTCGCTCTGTCCCAAGCAG GATGGCTAAAAGATTCTCAAGCCAATCCACTGACCATGATCACTCCTATGTGGAGTATCC TCAAGAAGCAGAGTACAAGGAAGAATTCCGGCCACCGTCTCCTGCTCCGTCTTATACTGA AAAGGATGTCCTCTCATCTATGGTAAGACGACTAGGCGAGTTGGAGGAGAAGGTGCAGGC GCTCGAAACGAAGCCATCCGAGATGCCATTTGAAAAGGAGGAATTGCTGAATGCAGCCGT CCGCCGTGTGGATGCATTAGAAGCCGAGTTAATCTCTACAAAGAAGGCTCTCTATGAAGC CCTGATGCGGCAGGACGAGCTGCTTGCGTACATTGACAAGCAAGATATGATCAAGTTTCG TAAAAAGAAATTCTGCTTCTAGCAGCTCAACGACGAGTTAATTCTCCATACACAGAGCTG TTCGTGTATATTTGGATCAATTAATCACCACGAATATGAATGAATGCAGCTAGTTTGGAG TGTAAAATTAAAAGTGTGCATATGGCAAATTGAGAATCCAACAATAACACCACGGTATCG GTATGTGAGTTACAAGGTGGACCTTGAGGTGTTGTTGGCTGGTCATTCAGAATCCAGACG ATGCATCGTCTTGTGCTGGAGGGTCCTGGCTGCTGTAAATTAAGCCTGTAATTAATCTTG TGACTTGTAACATATATAGCACAAATGTGAGTTAAAATCGTTGTAAATGGACTTCACCTT GGAATCATGCATCTTCTCATC