Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0543400-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:26966573:26969821:-1 gene:Os05g0543400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:farnesyl diphosphate synthase 2 description:Similar to Farnesyl diphosphate synthase (Fragment). (Os05t0543400-01);Similar to Farnesyl diphosphate synthase (Fragment). (Os05t0543400-02)
Sequence	ATGGCGGCGGCGAATGGGAGCGCCTGCGGCGGAGGCGGCGTGGACAAGGAGAAGGAGGAG TTCAAGCAGATCTACGGGGTGCTCAAGGAGGAGCTGCTCAGGGACCCCGCCTTCGAGTTC ACCGACTCGTCGCGGCAGTGGATCGATCGCATGTTGGACTACAATGTACCTGGAGGGAAG TGCAATCGTGGTCTCTCTGTGGTCGATAGCTATAAGCTGTTGAAGGGCACCAATGTTCTA AGTCAGGAAGACATGTTTCTCGCGAGCACTCTTGGTTGGTGCGTTGAATGGCTTCAAGCT TACTTTCTCGTGCTTGATGATATCATGGATGATTCTCACACTCGACGTGGTCAGCCTTGT TGGTTTCGGGTGCCTCAGGTTGGCTCCATTGCTATCAATGATGGAATTATCCTTCGCAAC CATATCACGCGAATGCTTCGGCTCCACTTTAGAGGAAAACTTTACTATGCTGATCTCCTT GATTTATTCAATGAGGTCGAGTTCAAGACAGCTTCAGGTCAATTGCTAGACCTTATCACT ACTCACGAGGGAGAAAAAGATCTAAACAAATATAACATAGGAGTTCACCGCCGCATTGTT CAATATAAGACATCCTACTATTCATTTTATCTGCCGGTTGCTTGTGCACTGTTGCTATCT GGAGAGGACTTGACCAAATATGGTGCTGTAGAAGACATTCTTGTTAAGATGGGAATATAC TTTCAAGTCCAAGACGATTATCTAGATTGTTATGGTGACCCCAAATTTATTGGCAAGATC GGGACTGACATTGAAGATTACAAATGCTCTTGGCTAGTTGTGCAAGCCCTTGAGCGTGCT GATGAGAGTCAAAAGAGCGTTCTATTTGAAAATTATGGAAAGAAAGATCCAGCCTGTGTG GCAAAAGTGAAGAGCCTCTACAGAGAACTAAACCTAGAGGCGGTCTTTCTGGACTATGAG AACGAGAGTTACAAGAAGTTGATTGCGGATATAGAAGCCCAGCCAAGCATAGCTGTTCAG AATGTTCTGAAGTCCTTCTTGCACAAGATCTACAAGAGACAGAAGTAG

Peptide Sequence

PEP ID	Os05t0543400-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:26966573:26969821:-1 gene:Os05g0543400 transcript:Os05t0543400-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:farnesyl diphosphate synthase 2 description:Similar to Farnesyl diphosphate synthase (Fragment). (Os05t0543400-01);Similar to Farnesyl diphosphate synthase (Fragment). (Os05t0543400-02)
Sequence	MAAANGSACGGGGVDKEKEEFKQIYGVLKEELLRDPAFEFTDSSRQWIDRMLDYNVPGGK CNRGLSVVDSYKLLKGTNVLSQEDMFLASTLGWCVEWLQAYFLVLDDIMDDSHTRRGQPC WFRVPQVGSIAINDGIILRNHITRMLRLHFRGKLYYADLLDLFNEVEFKTASGQLLDLIT THEGEKDLNKYNIGVHRRIVQYKTSYYSFYLPVACALLLSGEDLTKYGAVEDILVKMGIY FQVQDDYLDCYGDPKFIGKIGTDIEDYKCSWLVVQALERADESQKSVLFENYGKKDPACV AKVKSLYRELNLEAVFLDYENESYKKLIADIEAQPSIAVQNVLKSFLHKIYKRQK

Transcript Sequence

Transcript ID	Os05t0543400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:26966573:26969821:-1 gene:Os05g0543400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:farnesyl diphosphate synthase 2 description:Similar to Farnesyl diphosphate synthase (Fragment). (Os05t0543400-01);Similar to Farnesyl diphosphate synthase (Fragment). (Os05t0543400-02)
Sequence	CCCCACCACCTCCGGTCCATCTCGGCCGCCGCCGCTGTCGCTGTCGCGATCGCGATCCCC GCCTAGATAGACTTCCCCAAGAACCCGCCGCCGCCGCTGCAGGGGTGGCGTGGCATCGCG GGAGACCAGCTCGAGCCTTCAGCCTCTTTTGCGCCGCCGCCGCCGCCGCCGGTCGATCCG TGTTCTTGGCTCAGGCGGCGTCAATGGCGGCGGCGAATGGGAGCGCCTGCGGCGGAGGCG GCGTGGACAAGGAGAAGGAGGAGTTCAAGCAGATCTACGGGGTGCTCAAGGAGGAGCTGC TCAGGGACCCCGCCTTCGAGTTCACCGACTCGTCGCGGCAGTGGATCGATCGCATGTTGG ACTACAATGTACCTGGAGGGAAGTGCAATCGTGGTCTCTCTGTGGTCGATAGCTATAAGC TGTTGAAGGGCACCAATGTTCTAAGTCAGGAAGACATGTTTCTCGCGAGCACTCTTGGTT GGTGCGTTGAATGGCTTCAAGCTTACTTTCTCGTGCTTGATGATATCATGGATGATTCTC ACACTCGACGTGGTCAGCCTTGTTGGTTTCGGGTGCCTCAGGTTGGCTCCATTGCTATCA ATGATGGAATTATCCTTCGCAACCATATCACGCGAATGCTTCGGCTCCACTTTAGAGGAA AACTTTACTATGCTGATCTCCTTGATTTATTCAATGAGGTCGAGTTCAAGACAGCTTCAG GTCAATTGCTAGACCTTATCACTACTCACGAGGGAGAAAAAGATCTAAACAAATATAACA TAGGAGTTCACCGCCGCATTGTTCAATATAAGACATCCTACTATTCATTTTATCTGCCGG TTGCTTGTGCACTGTTGCTATCTGGAGAGGACTTGACCAAATATGGTGCTGTAGAAGACA TTCTTGTTAAGATGGGAATATACTTTCAAGTCCAAGACGATTATCTAGATTGTTATGGTG ACCCCAAATTTATTGGCAAGATCGGGACTGACATTGAAGATTACAAATGCTCTTGGCTAG TTGTGCAAGCCCTTGAGCGTGCTGATGAGAGTCAAAAGAGCGTTCTATTTGAAAATTATG GAAAGAAAGATCCAGCCTGTGTGGCAAAAGTGAAGAGCCTCTACAGAGAACTAAACCTAG AGGCGGTCTTTCTGGACTATGAGAACGAGAGTTACAAGAAGTTGATTGCGGATATAGAAG CCCAGCCAAGCATAGCTGTTCAGAATGTTCTGAAGTCCTTCTTGCACAAGATCTACAAGA GACAGAAGTAGGGGGGGTTTCTGTGCAGGAAGCTGTCCATTGTTGCATGTTTCTTCTCTA GCAACTGATGTTGTATGTTGCAATTTGCTGATCTTGGATAATAATGTTGCAAGGTGTTAT TTCGGGTGTGATGGACCGCTTGGTGTAGACATTAGACAATAATACATGAGCTGTTTGTCT TGTTATTAGC