Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0543300-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:26963023:26965865:1 gene:Os05g0543300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-121 description:WD40 repeat, region domain containing protein. (Os05t0543300-01)
Sequence	ATGGCGGCGACGCTGTCGCAGCTCGACGACGGGATCGTCCGCGGGATGGCCATCGGCGCG GTATTCACCGACTACGCTGGGAAGATAAACTGCCTCGACTTCCACCGCAAGGAGGATCTC CTCGTCACCTCCAGCGAGGACGACTCCATACGCCTCTACAACATCACCAGCGCCACGTTG TTGAAGACTACATATCATAGGAAACATGGTGCTGACCGTGTCTGTTTCACTCACCATCCG AGTTCTATCTTATGTTCATCAAGATACAATCTAGAGTCAGCAGAGTCACTTCGTTATTTA TCACTGTATGACAACCGTTGCTTAAGATATTTTAAAGGACACAAAGACAGGGTTGTTTCA CTATGTATGTCACCTGTCAACGATAGTTTTATGTCAGGATCACTTGATCACAGTGTCAGG ATATGGGATCTTCGTGTAAATGCTTGTCAGGGTATACTACGTTTGCGTGGTAGGCCTTCT GTTGCATATGATCAGCAGGGACTTGTTTTTGCCGTGGCAATGGAAGGAGGTGCTATTAAG CTATTTGATTCCCGGTCATATGACAAAGGTCCCTTTGACACTTTCTTGGTTGGTGGAGAT ACAGCTGAAGTTTCTGACATCAAATTTAGCAATGATGGCAAGTCCATGCTTTTGACAACA ACCAACAACCATATATATGTTCTGGATGCATATGGAGGGGATAAGAGGTGTGGCTTTAGT CTGGAGTCATCTCCCAATGTAGCAACTGAAGCTGCTTTTACTCCAGATGGCCAATATGTA ATTTCAGGATCTGGTGATGGTACCTTGCATGCTTGGAACATCAATACAATACAAGAGATT GCTTGTTGGAACAGTCACATCGGTCCTATCACTGCTTTGAAGTGGGCTCCCCGTCGAGCA ATGTTTGCAACTGCGTCAACTGCCCTAACTTTCTGGATTCCCAACAATTCCAGTTCGAAT TAG

Peptide Sequence

PEP ID	Os05t0543300-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:26963023:26965865:1 gene:Os05g0543300 transcript:Os05t0543300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-121 description:WD40 repeat, region domain containing protein. (Os05t0543300-01)
Sequence	MAATLSQLDDGIVRGMAIGAVFTDYAGKINCLDFHRKEDLLVTSSEDDSIRLYNITSATL LKTTYHRKHGADRVCFTHHPSSILCSSRYNLESAESLRYLSLYDNRCLRYFKGHKDRVVS LCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPSVAYDQQGLVFAVAMEGGAIK LFDSRSYDKGPFDTFLVGGDTAEVSDIKFSNDGKSMLLTTTNNHIYVLDAYGGDKRCGFS LESSPNVATEAAFTPDGQYVISGSGDGTLHAWNINTIQEIACWNSHIGPITALKWAPRRA MFATASTALTFWIPNNSSSN

Transcript Sequence

Transcript ID	Os05t0543300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:26963023:26965865:1 gene:Os05g0543300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-121 description:WD40 repeat, region domain containing protein. (Os05t0543300-01)
Sequence	ACTCTACAACAGATCGGAAACCTCGCGGGCGGCGGCGGCGGCGGCGCGGGTAAGCGAGCG GACACCGGCGACGAGCGCGAGGAGGAGGAGGAGGAGGAAGGAGAAGATGGCGGCGACGCT GTCGCAGCTCGACGACGGGATCGTCCGCGGGATGGCCATCGGCGCGGTATTCACCGACTA CGCTGGGAAGATAAACTGCCTCGACTTCCACCGCAAGGAGGATCTCCTCGTCACCTCCAG CGAGGACGACTCCATACGCCTCTACAACATCACCAGCGCCACGTTGTTGAAGACTACATA TCATAGGAAACATGGTGCTGACCGTGTCTGTTTCACTCACCATCCGAGTTCTATCTTATG TTCATCAAGATACAATCTAGAGTCAGCAGAGTCACTTCGTTATTTATCACTGTATGACAA CCGTTGCTTAAGATATTTTAAAGGACACAAAGACAGGGTTGTTTCACTATGTATGTCACC TGTCAACGATAGTTTTATGTCAGGATCACTTGATCACAGTGTCAGGATATGGGATCTTCG TGTAAATGCTTGTCAGGGTATACTACGTTTGCGTGGTAGGCCTTCTGTTGCATATGATCA GCAGGGACTTGTTTTTGCCGTGGCAATGGAAGGAGGTGCTATTAAGCTATTTGATTCCCG GTCATATGACAAAGGTCCCTTTGACACTTTCTTGGTTGGTGGAGATACAGCTGAAGTTTC TGACATCAAATTTAGCAATGATGGCAAGTCCATGCTTTTGACAACAACCAACAACCATAT ATATGTTCTGGATGCATATGGAGGGGATAAGAGGTGTGGCTTTAGTCTGGAGTCATCTCC CAATGTAGCAACTGAAGCTGCTTTTACTCCAGATGGCCAATATGTAATTTCAGGATCTGG TGATGGTACCTTGCATGCTTGGAACATCAATACAATACAAGAGATTGCTTGTTGGAACAG TCACATCGGTCCTATCACTGCTTTGAAGTGGGCTCCCCGTCGAGCAATGTTTGCAACTGC GTCAACTGCCCTAACTTTCTGGATTCCCAACAATTCCAGTTCGAATTAGGTGCCTAGCAA AAAGGATGGAACGTGTGATATGCTGATTCAACAAACACTTGTATCCTGTTCTTTCCTGCA CAAGATGGGTATCGTGTATGAAGTATCAATCTCTTTATTACCATCTGTGGCAAAAAATGA TGATGTACACCTTCCCATTGTATTCTCTTATGGCTATTGTTAATACACATAAAATTTTCT GCATCAGTC